mRNA_L-digitata_M_contig10046.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig10046.1.1 vs. uniprot
Match: D8LS43_ECTSI (Hemolysin-type calcium-binding region n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS43_ECTSI) HSP 1 Score: 666 bits (1719), Expect = 1.230e-220 Identity = 488/869 (56.16%), Postives = 542/869 (62.37%), Query Frame = 1
Query: 1 MGVLWRRAVLAYGLGALMTVEGLAGPLESLTRERWVPLDSTATDQTTDVATSSSGSMVYISGYKQ-GAPGADGTQ-NIEALLMAYNSSGAQQWAVEYGSGVETLGNSVAADGTGVYLAGTDSVPSNDTGADEQAD--------TDAFVVKYNSTGGLVWKTSWGTSEPDQGNGVAVDDGSNLVYVVGTTKGSMDEEARASGTPEEAAEAAAGEGGALAGVGTSEXXXXXXXXXXXXXSAGLEGKVVAANAGASDVFLTCLDAVEGGVLWTRQFGSSSADAGISVAVGPRGGVFLVGQLGDDEDLSLTGPRAFLAKYDYLGNAQFTARLNSSSTHYAVDLAPSVGSGGEGVVYMSGYTLGDNPEVFLARFEGSTGAQTWLSHLGEESGMPHQAQSVAVVEGNQRGF---IGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSEPGNGARVVVVGHNTSVASAESHSSTGFTAAADTNGEWTWYSVSQKAERETAIAIGAGGGVGGVGDPE-----DSFAFIVGTVAADEASPGNYLFLDVQKVVRQALPTPAPAVSSGLTXXXXXXXXXXXXXXXXXX---LSQGSSLWLLIIAPIFVVVSCILIVGYVSKQCTIAFGTRPRDPEDSMGSMEFTPRGVGGSRDHGGGNKRPSSRSKRSLRRAKPSPPVTANWRDEGSPRSGSPAAGRRRRQGKEER--GWPRSVAAALRSKGDGGPGGPPYRKLETNSSXXXXXXXXXXXXXEPLPSRGRESGGALGGEDPELAMTAHRG--GARVVSASVKGPSEEGSWVGGDGGSXXXXXXXXXXDRKSLGLDS---PEAPFEWDAFESEAPAGAGGGLGADVS---GNPRE-DEPA 2511
MG WR +LA + GLA PL+SL RE WV LDSTATDQTTDVAT + G MVYISGY+Q A G DG+Q +++ALLMAYNSSG +QW EYGS E LGNSVAAD TGVYLAGT+SVP + + TDAFVVKYNSTGG++WKTSWG+SEPD GNG+AVD GS LVY+VGTT+GSM + GTPE G XXXXXXXXXXXXXSA G ANAG SDVFLTCLDA +G + WTRQFGSS+ D G VAVGPRGGVFLVGQLGDD D SL GPRAFLAKYDYLGNAQFTARLNS+S HYAVDLAPS+GSGGEGVVYMSGYTLGD+P VFLARFEGSTGAQTWLSHLGEE+GMPH AQSVAVVEG+Q F +GG + GN AR+VVVG+NTS A+A+SHSSTGFTAAADT+G W WYS S+KA+R+TAIAIG G +SFA+IVGTVAA EASPGNYLFLD+Q+VVR+ TPAP XXXXXXXXXXXXXXXXXX LSQGSSLWLLIIAPIFVV+SCIL+VGYVSKQC IAFGTRP P +S+ ++F + GGG R+ RS RR K SPP N R GS GS R K R GWPRSVAAA R GG PYRKL T XXXXXXX PE A R R A P EE + GG G KS G + A WDAF E AG GGG G NPR+ DEPA
Sbjct: 1 MGGHWRW-LLACEWFIFLAARGLASPLDSLEREHWVSLDSTATDQTTDVATGAGG-MVYISGYQQQAAAGTDGSQPSVQALLMAYNSSGVRQWVAEYGSSGEDLGNSVAADSTGVYLAGTESVPRSSSXXXXXXXXXXXXXXXTDAFVVKYNSTGGVLWKTSWGSSEPDLGNGLAVDGGSGLVYIVGTTRGSM----YSDGTPE-------GXXXXXXXXXXXXXXXXXXXXXXXXXSAATAG----ANAGMSDVFLTCLDAADGEMQWTRQFGSSAVDVGNRVAVGPRGGVFLVGQLGDDADSSLAGPRAFLAKYDYLGNAQFTARLNSTSAHYAVDLAPSIGSGGEGVVYMSGYTLGDSPSVFLARFEGSTGAQTWLSHLGEETGMPHLAQSVAVVEGSQYDFSLGVGGAAEGAAAAAPGPSGDAGEGEEQ------------------AAVGNEARIVVVGYNTSAAAADSHSSTGFTAAADTSGSWAWYSASEKADRQTAIAIGTADGXXXXXXXXXXXXXESFAYIVGTVAASEASPGNYLFLDIQRVVRERSQTPAPTAQQAAAXXXXXXXXXXXXXXXXXXTTGLSQGSSLWLLIIAPIFVVLSCILMVGYVSKQCAIAFGTRPHPPPESLEPIDFE--------EDGGG-----MRTTRSFRRGKKSPPPEWNDRASGSLSKGSAGLRRSGTSSKTGRAAGWPRSVAAAFRE------GGSPYRKLRTREQEPGRSGXXXXXXXXXXXXXXXXXXXXXSPLSPENAEVEMRQVTAERRHRAPFDHPREEEGFPGG--GEESVATFEDLSHSKSGGATAGAGAAASAGWDAFGEEEIAGGGGGYGGRSHMSMSNPRDGDEPA 813
BLAST of mRNA_L-digitata_M_contig10046.1.1 vs. uniprot
Match: A0A836CJ10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ10_9STRA) HSP 1 Score: 166 bits (419), Expect = 7.510e-38 Identity = 143/376 (38.03%), Postives = 186/376 (49.47%), Query Frame = 1
Query: 28 LAYGLGALMTVEGLAG---PLESLTRER-WVPLDSTATDQTTDVATSSSGSMVYISGYKQG--APGADGTQNIEALLMAYNSSGAQQWAVEYGSGVETLGNSVAADGTG-VYLAGTDSVPSNDTGADEQADTDAFVVKYNS-TGGLVWKTSWGTSEPDQGNGVAVDDGSNLVYVVGTTKGSMDEEARASGTPEEAAEAAAGEGGALAGVGTSEXXXXXXXXXXXXXSAGLEGKVVAANAGASDVFLTCLDAVEGGVLWTRQFGS----------SSADAGISVAVGPRGGVFLVGQLGDDEDLSLTGPRAFLAKYDYLGNAQ-------------------------------------FTARLNSSSTHYAVDLA 990
+A LG L+ +A PL S+ W+ L+ST DQ TD + G+ VYISGY G A G + +A L AYN++G W+ YG + VA DG+G V++AGT P + G + + AF +Y++ TG VW+ +WGT + D GVAVD G L+YVVG+T+GS G A A GT XXXXXXXXXXXXX NAG +D FL+CL A +G +LWTRQ GS S D + VAVGPRGGV++VGQ+G D +L RAFL ++DYLGN Q F RLNS++THYA +A
Sbjct: 4 IAVALGVLLASSAVAANPPPLASVYNSSFWLGLESTPQDQLTDAVAEAGGNAVYISGYGSGIAAAGVPDPRGQDAFLRAYNATGGLLWSANYGGQYDDSAEGVALDGSGGVFIAGTLGGPPQEDGTGKNSS--AFAARYDAATGARVWERTWGTDDTDGAAGVAVDAGEGLLYVVGSTQGSFG-------------------GDAAAPNGTXXXXXXXXXXXXXXXXX------XXXNAGNADFFLSCLQASDGALLWTRQVGSFGPGVAAVGSSGYDVAVRVAVGPRGGVYVVGQMGTDN--ALESARAFLGRWDYLGNQQXXXXXXXXXXXXXXXXXAQQESVRXXXXXXXXXXXXXFMVRLNSTATHYATAVA 350
BLAST of mRNA_L-digitata_M_contig10046.1.1 vs. uniprot
Match: A0A2A4RVE0_9CHLR (Uncharacterized protein n=1 Tax=SAR202 cluster bacterium TaxID=2030829 RepID=A0A2A4RVE0_9CHLR) HSP 1 Score: 110 bits (274), Expect = 1.410e-21 Identity = 108/365 (29.59%), Postives = 165/365 (45.21%), Query Frame = 1
Query: 112 LDSTATDQTTDVATSSSGSMVYISGYKQGAPGADGTQNIEA---LLMAYNSSGAQQWAVEYGSGVETLGNSVAADGTG-VYLAGTDSVPSNDTGADEQADTDAFVVKYNSTGGLVWKTSWGTSEPDQGNGVAVDDGSNLVYVVGTTKGSMDE------------EARASGTPEEAAEAAAGEGGALAGVGTSEXXXXXXXXXXXXXSAGLEGKVVAANAGASDVFLTCLDAVEGGVLWTRQFGSSSADAGISVAVGPRGGVFLVGQL--GDDEDLSLTGPRAFLAKYDYLGNAQFTARLNSSSTHYAVDLAPSVGSGGEGVVYMSGYTLGD--------NPEVFLARFEGSTGAQTWLSHLGEES 1128
L S+ D + SSG+ VY++G G G D + A ++ YNSSG ++W + GS N VA D +G VY AG V + + ++D FVVKYNS+G W +GT D+ GVA D N VYVVG TKG+++ + +SGT + + + GV T X G +AG +D+F+ ++ G WT+Q G+S D VA G V++ G G D + + F+ KY+ G Q+T ++ +SST DLA + + G +Y++G T G N ++F+ ++ S+G + W LG S
Sbjct: 56 LGSSGLDSANGITIDSSGN-VYVTGVTFG--GLDWNTSAGANDLFVVKYNSSGTKEWTEQLGSASSDYANGVATDSSGNVYXAG---VTYGGLDGNSKGNSDLFVVKYNSSGTKQWTKQYGTDRYDEARGVATDSSGN-VYVVGGTKGNLNGISNSGRTDAFVIKFNSSGTKQWTKKLGTWQNDLANGVATDSSGNFYVTGFTYQXXDG------NTSAGXADLFVVKYNS-SGTKQWTKQLGTSKHDRARGVATDSSGNVYVTGDTYGGLDGNTNAGYNDLFVVKYNSSGTKQWTKQMGTSST----DLANGIATDSSGNIYVTGGTYGGLDGNTNAGNSDLFVVKYN-SSGTKQWTKQLGSSS 401
BLAST of mRNA_L-digitata_M_contig10046.1.1 vs. uniprot
Match: A0A5Q4G042_9DEIN (BIG2 domain-containing protein n=1 Tax=Trueperaceae bacterium TaxID=2026798 RepID=A0A5Q4G042_9DEIN) HSP 1 Score: 104 bits (259), Expect = 2.860e-19 Identity = 109/354 (30.79%), Postives = 158/354 (44.63%), Query Frame = 1
Query: 118 STATDQTTDVATSSSGSMVYISGYKQGAPGADGTQNIEALLMAYNSSGAQQWAVEYGSGVETLGNSVAADGTG-VYLAGTDSVPSNDTGADEQADTDAFVVKYNSTGGLVWKTSWGTSEPDQGNGVAVDDGSNLVYVVGTTKGSMDEEARASGTPEEAAEAAAGEGGALAGV---GTSEXXXXXXXXXXXXXSAGLEGKVV----AANAGASDVFLTCLDAVEGGVLWTRQFGSSSADAGISVAVGPRGGVFLVG-QLGDDEDLSLTGPRAFLAKYDYLGNAQFTARLNSSSTHYAVDLAPSVGSGGEGVVYMSGYTLG--DNPE-----VFLARFEGSTGAQTWLSHLGEESG 1131
+++ DQ VAT + G+ VY +GY GA G N +A + +Y+ G+ +W ++G+ + VA D G VY AG A + D F+ Y+ G L W +GTS D G+A D N VYV G T G+++ S E+A + G+L GTS + + G AAN+G DVF+ D+ GG+ WTRQFG+ S D VA G VF+ G GD + S AF+ YD G ++T + +SS D+A V + G VY +G T G D E F+ ++ + G+ W G SG
Sbjct: 163 TSSNDQAFGVATDAEGN-VYAAGYTFGALEGAGAGNADAFVRSYDREGSLRWTRQFGTSADDEAFGVATDAEGNVYAAGYTRGALEGPNAGGE---DVFIRSYDRDGSLRWTRQFGTSSGDFATGMATDASGN-VYVTGYTLGALEGPNAGS---EDAFIRSYDRDGSLRWTRQFGTSSEDVATGVATDASGNVYVTGYTYGALHAANSGFVDVFVRSYDSA-GGLRWTRQFGTGSGDVANGVATDASGNVFIAGGTFGDLDGTSAGSEDAFVRSYDSEGGLRWTRQFGTSSG----DVANGVATDASGNVYAAGSTGGALDGAEFGTFDAFVRSYD-NEGSLRWTRQFGTSSG 502
BLAST of mRNA_L-digitata_M_contig10046.1.1 vs. uniprot
Match: A0A5Q4GFJ0_9DEIN (BIG2 domain-containing protein n=1 Tax=Trueperaceae bacterium TaxID=2026798 RepID=A0A5Q4GFJ0_9DEIN) HSP 1 Score: 102 bits (254), Expect = 1.190e-18 Identity = 98/314 (31.21%), Postives = 139/314 (44.27%), Query Frame = 1
Query: 145 VATSSSGSMVYISGYKQGAPGADGTQNIEALLMAYNSSGAQQWAVEYGSGVETLGNSVAADGTG-VYLAGTDSVPSNDTGADEQADTDAFVVKYNSTGGLVWKTSWGTSEPDQGNGVAVDDGSNLVYVVGTTKGSMDEEAR-----------ASGTPEEAAEAAAGEGGALAGVGTSEXXXXXXXXXXXXXSAGLEGKVVAANAGASDVFLTCLDAVEGGVLWTRQFGSSSADAGISVAVGPRGGVFLVGQLGDDEDLSLTG-PRAFLAKYDYLGNAQFTARLNSSSTHYAVDLAPSVGSGGEGVVYMSGYTLG 1047
VAT +SG+ VY++G GA +A + +++S G +W ++G+G VA D G VY+AG T A DAFV Y+ G L W +GTS D GVA D S +YV G T G+++ + A G ++ + AGV T +G + AN+G D F+ D +GG+ WTRQFG+ S VA P G V++ G G D + G AF+ YD G ++T + +SS+ D A V + G VY SGYT G
Sbjct: 230 VATDASGN-VYVTGRTFGALEGSNAGASDAFVRSFDSGGTLRWTRQFGTGSVDAALGVATDANGNVYIAGFTLGSLQGTNA---GGADAFVRSYDGEGTLRWTRQFGTSSDDIAFGVAAD-ASGHIYVAGRTAGALEGSSAGNFDAFVRSYDADGILRWTSQFGSSSIDGAAGVATDATGNVYVAGFT-------QGALEGANSGMEDAFVRSYDG-DGGLRWTRQFGTGSGTEAFGVAADPTGNVYVAGATGGDLEGGGAGIVDAFVRSYDGDGELRWTRQFGTSSS----DRALGVATDASGNVYASGYTFG 526
BLAST of mRNA_L-digitata_M_contig10046.1.1 vs. uniprot
Match: A0A0M5IKI6_9DELT (Big_5 domain-containing protein n=1 Tax=Desulfuromonas soudanensis TaxID=1603606 RepID=A0A0M5IKI6_9DELT) HSP 1 Score: 96.7 bits (239), Expect = 8.190e-17 Identity = 104/341 (30.50%), Postives = 151/341 (44.28%), Query Frame = 1
Query: 172 VYISGYKQGAPGAD-GTQNIEALLMAYNSSGAQQWAVEYGSGVETLGNSVAADGTG-VYLAGTDSVPSNDTGADEQADTDAFVVKYNSTGGLVWKTSWGTSEPDQGNGVAVDDGSNLVYVVGTTKGSMDEEARASGTPEEAA-------EAAAGEGGALA-----GVGTSEXXXXXXXXXXXXXSAGLEGKVVAANAGASDVFLTCLDAVEGGVLWTRQFGSSSADAGISVAVGPRGGVFLVGQLGD--DEDLSLTGPRAFLAKYDYLGNAQFTARLNSSSTHYAVDLAPSVGSGGEGVVYMSGYTLGD---------NPEVFLARFEGSTGAQTWLSHLG 1119
+Y+ G GA AD G + L Y+++G +QW + G+ + G +VA DG G VYLAG T + Q TD FV KY+ G W +G++ D G+AVD NL+ V G G + + GT A +A +GG L+ GV GL+G A AG+ D+FL D G LWTRQ G+ S+D VA+ G V++ G D +L G AFL KYD G ++ + + S D A SV G + ++G T G N ++F+ R++G G++ W +G
Sbjct: 168 LYLVGETGGALTADPGNGGADIFLAKYDATGTRQWLRQLGTVADDFGYAVAVDGGGSVYLAG--GTGGALTASPSQGGTDIFVAKYDGGGTRQWLRQFGSAGEDAAYGLAVDGLGNLL-VAGGASGVLGSDPFVGGTDLFVAKYDSLGTQAWLRQGGTLSADLAYGVAAD---GSGNVYAVGATQGGLDGN---AGAGSDDLFLLKYDGA-GIRLWTRQLGTVSSDVAYGVALDHAGSVYVAGATSGALDGNLRQGGEDAFLLKYDGSGGLLWSRQFGTVSA----DAARSVACDPHGQISVAGDTFGSLGELNASAGNSDLFVVRYDGE-GSRRWARQIG 493
BLAST of mRNA_L-digitata_M_contig10046.1.1 vs. uniprot
Match: A0A534KZW3_9EURY (Fibronectin type-III domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A534KZW3_9EURY) HSP 1 Score: 93.6 bits (231), Expect = 1.390e-15 Identity = 96/336 (28.57%), Postives = 142/336 (42.26%), Query Frame = 1
Query: 163 GSMVYISGYKQGA-PGADGTQNIEALLMAYNSSGAQQWAVEYGSGVETLGNSVAADGTGVYLAG-TD-SVPSNDTGADEQADTDAFVVKYNSTGGLVWKTSWGTSEPDQGNGVAVDDGSNLVYVVGTTKGSMDEEARASGTPEEAAEAAAGEGGALAGVGTSEXXXXXXXXXXXXXSAGLEGKVVAANAGASDVFLTCLDAVEGGVLWTRQFGSSSADAGISVAVGPRGGVFLVG--QLGDDEDLSLTGPR-AFLAKYDYLGNAQFTARLNSSSTHYAVDLAPSVGSGGEGVVYMSGYTLGDNP--------EVFLARFEGSTGAQTWLSHLGEES 1128
GS +Y++G G PG I+A + Y++ G W ++G+ +VAAD +GVY+AG TD ++P G TDAFV KY+++G W +GTS D N +A D VYVVG T G++ + N G D F+ D+ G +WTRQFG+SS D +SVA+ +G LV G L+ G R AFL YD G ++T ++ + + +A + VY++GYT G P + FL ++ S G + W+ G S
Sbjct: 163 GSDIYVAGSTIGTFPGEMNAGYIDAYVRKYDAMGTVVWTRQFGASWIDEALAVAADSSGVYVAGYTDHALP----GQSSAGGTDAFVRKYDASGAEAWTQQFGTSGNDVANALAADPSG--VYVVGATDGTLPGQ---------------------------------------------------TNVGVGDAFVRRYDS-SGTEVWTRQFGTSSDDGAVSVAI--QGSSVLVAGYTFGTFPGLTNQGSRDAFLRNYDASGTERWTRQVGTPADDLPYGVAADASA-----VYVAGYTYGAFPGNTNPGDQDAFLQSYDAS-GDERWIRQFGTSS 432
BLAST of mRNA_L-digitata_M_contig10046.1.1 vs. uniprot
Match: UPI001FE6C040 (SBBP repeat-containing protein n=1 Tax=Aphanothece hegewaldii TaxID=1521625 RepID=UPI001FE6C040) HSP 1 Score: 94.4 bits (233), Expect = 1.550e-15 Identity = 99/351 (28.21%), Postives = 158/351 (45.01%), Query Frame = 1
Query: 91 TRERWVPLDSTATDQTTDVATSSSGSMVYISGYKQGAPGADGTQ-NIEALLMAYNSSGAQQWAVEYGSGVETLGNSVAADGTG-VYLAGTDSVPSNDTGADEQADTDAFVVKYNSTGGLVWKTSWGTSEPDQGNGVAVDDGSNLVYVVGTTKGSMDEEARASGTPEEAAEAAAGEGGAL--AGVGTSEXXXXXXXXXXXXXS----AGLEGKVVAANAGASDVFLTCLDAVEGGVLWTRQFGSSSADAGISVAVGPRGGVFLVGQLGDDEDLSLTGPR-----AFLAKYDYLGNAQFTARLNSSSTHYAVDLAPSVGSGGEGVVYMSGYTLGD-------NPEVFLARFEG 1083
TR+ P D +A T+D A +YI+G +G+ + Q N +A + Y + G+ W + G+ + NS+ +DG G +Y+AG DT + TDAF+ KY + G L+WK GT D + D NL Y+ G TKGS++ + A+ A +G L +GT+ + +G + N G +DVF+ A++G +LW+ Q G+ S D S+ G ++L G D SL P AF+AKY G +T +L +S+ + D+ S G G ++++G+T G N + FL + G
Sbjct: 2841 TRQLGTPSDDSANSITSDGA-----GNLYIAGETKGSLENNTNQDNSDAFIAKYANDGSLLWTRQLGTPSDDSANSIISDGAGNLYIAGETKGSLEDT---SKGLTDAFIAKYANDGSLLWKRQLGTPGDDFARSITSDGAGNL-YIAGETKGSLENNTTQDNSDAFIAKYA-NDGSLLWTRQLGTASDDTTRSIKSDGAGNLYIAVNTKGSLGGTNQGLTDVFVAKY-AIDGTLLWSHQLGTPSDDFANSIITDEAGNLYLTGST----DGSLASPNKGQRDAFVAKYAPDGKLLWTRQLGTSNADASRDIV----SDGAGSLFIAGFTDGSLGGTTKGNTDAFLLQIIG 3172
BLAST of mRNA_L-digitata_M_contig10046.1.1 vs. uniprot
Match: A0A5K7X7V0_9BACT (Uncharacterized protein n=1 Tax=Lacipirellula parvula TaxID=2650471 RepID=A0A5K7X7V0_9BACT) HSP 1 Score: 92.8 bits (229), Expect = 2.600e-15 Identity = 99/353 (28.05%), Postives = 155/353 (43.91%), Query Frame = 1
Query: 118 STATDQTTDVATSSSGSMVYISGYKQGAPGADGTQNIEALLMAYNSSGAQQWAVEYGSGVETLGNSVAADGTG-VYLAGTDSVPSNDTGADEQADTDAFVVKYNSTGGLVWKTSWGTSEPDQGNGVAVDDGSNLVYVVGTTKGSMDEEARASGTPEEAAEAAAGEGGALAGV---------GTSEXXXXXXXXXXXXXSAGL-EGKVVAANAGASDVFLTCLDAVEGGVLWTRQFGSSSADAGISVAVGPRGGVFLVG-QLGDDEDLSLTGPRAFLAKYDYLGNAQFTARLNSSSTHYAVDLAPSVGSGGEGVVYMSGYTLGDNP-------EVFLARFEGSTGAQTWLSHLG 1119
++A+D T ++ G+ V+++GY G G +A LM YN+SG + G+ +G V+ADG G VY+ G V + G D D FV KY+STG L+W GT+ D +G V D VY+ G T+G++ GT A++A + A + G E +GL G + AN G DV++ + W Q G++S D + G V++ G LG+ + G +++KY G +T + ++ D+A SV + G G VY +GYT G+ +VF+ ++ S G W LG
Sbjct: 231 TSASDDTRGISLDGMGN-VHVTGYTSGNLGGTSAGGQDAYLMKYNASGTLLGTQQLGTAASDVGTGVSADGLGNVYITG---VTLGNLGGVNAGDRDIFVSKYDSTGTLLWTQQLGTASLDVPSGGMVADAFGGVYISGRTEGNL------GGTSAGASDAFVTKYDASGTLLWTEQFGTSGDEETWGISTDGFGSVYISGLTNGSLGGANVGLEDVWVARIHED-----WIAQLGTASMDEARGSSTDELGNVYISGFTLGNLGGTNAGGQDGYVSKYAVDGTLLWTRQFGTTGH----DIAFSVSADGLGNVYAAGYTAGNLGGANAGFLDVFVTKYSAS-GTLLWTQQLG 563
BLAST of mRNA_L-digitata_M_contig10046.1.1 vs. uniprot
Match: A0A7X7ET47_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7X7ET47_9BACT) HSP 1 Score: 90.5 bits (223), Expect = 7.860e-15 Identity = 96/343 (27.99%), Postives = 147/343 (42.86%), Query Frame = 1
Query: 103 WVPLDSTATDQTTDVATSSSGSMVYISGYKQGAPGADGTQNIEALLMAYNSSGAQQWAVEYGSGVETLGNSVAADGTG-VYLAGTDSVPSNDTGAD---EQADTDAFVVKYNSTGGLVWKTSWGTSEPDQGNGVAVDDGSNLVYVVGTTKGSMDEEARASGTPEEAAEAAAGEGGALAGVGTSEXXXXXXXXXXXXXSAGLEGKVVAA-----NAGASDVFLTCLDAVEGGVLWTRQFGSSSADAGISVAVGPRGGVFLVGQL-GDDEDLSLTGPRAFLAKYDYLGNAQFTARLNSSSTHYAVDLAPSVGSGGEGVVYMSGYT---LGDN----PEVFLARFE 1080
W T+ + + AT+ S +YISG+ G G + +A L+ Y+ SG W+ + SG +VAAD G +Y++G T D + TDAF+VK+N +G ++W+ G D+ N VAVD N VY+ G T S+ E +G +GTS + + G + NAG +D FL G +W RQ G+S D SVAV +++ G G+ D+ G FLA YD G ++ ++ + D++ SV VY++GYT LG + FL +F+
Sbjct: 107 WSKQIGTSNVENCNAATTGSSGDIYISGFTTGDLGGSSSGGADAFLVKYDPSGTHLWSEKVDSGYYDNSLAVAADAFGNIYISGK-------TDGDIVLSEGGTDAFLVKFNESGSVLWRRQKGNIGTDESNAVAVDAQGN-VYISGYTDRSLCEPTHGGYDAFVIKYEGSGIEHWSKQIGTSGEDRSNAVAVDATGNVYISGFTTGSLENCVNAGGTDAFLIKYSP-NGNFVWARQLGTSDNDTSHSVAVDSSDNIYITGTTAGNLNDIGAGGEDIFLACYDTEGTLLWSRQIGTIGD----DVSRSVAIDAWDNVYITGYTNNNLGGTHAGGDDAFLIKFQ 436 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10046.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig10046.1.1 >prot_L-digitata_M_contig10046.1.1 ID=prot_L-digitata_M_contig10046.1.1|Name=mRNA_L-digitata_M_contig10046.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=857bp MGVLWRRAVLAYGLGALMTVEGLAGPLESLTRERWVPLDSTATDQTTDVAback to top mRNA from alignment at L-digitata_M_contig10046:131..8725- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig10046.1.1 ID=mRNA_L-digitata_M_contig10046.1.1|Name=mRNA_L-digitata_M_contig10046.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=8595bp|location=Sequence derived from alignment at L-digitata_M_contig10046:131..8725- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig10046:131..8725- >mRNA_L-digitata_M_contig10046.1.1 ID=mRNA_L-digitata_M_contig10046.1.1|Name=mRNA_L-digitata_M_contig10046.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=2571bp|location=Sequence derived from alignment at L-digitata_M_contig10046:131..8725- (Laminaria digitata LdigPH10_18mv male)back to top |