mRNA_L-digitata_M_contig100424.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig100424.1.1
Unique NamemRNA_L-digitata_M_contig100424.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig100424.1.1 vs. uniprot
Match: UPI00145D502D (FAD-dependent oxidoreductase n=1 Tax=Chelativorans sp. ZYF759 TaxID=2692213 RepID=UPI00145D502D)

HSP 1 Score: 609 bits (1570), Expect = 4.760e-212
Identity = 282/312 (90.38%), Postives = 297/312 (95.19%), Query Frame = 1
Query:    1 ITCDHIVSCTGNFARKTGAMVGLNVPVIPVEHQYIVTEPHPAIVERKAKGLPEMGVLRESDSSWYMREENGGLLLGPYEHGAPACYVDGPSDDSEYELFQEDLERLMPHVETAIARVPAFGEVGIKKIYNGAIAYTPDGSPAIGPAPGLKNFWLNEGHSFGVTAAGGAGWQIAEWIVEGEPSIDMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEERAAARPLKTTPIYDRLKARGAVFGSVYGWERANWFAPEGYTVPAGELDIGADVLTDHNHAPALEDGLIVERWSFRRSNYHEHVGNEVKTV 936
            I  +H+VSCTGNFARKTG MVGL+VPVIPVEHQYIVTEPHPAIVERK++GLPEMGVLRESDSSWYMREENGGLLLGPYEHGAP CYVDGPSDDSEYELFQEDLERLMPH+ETAIARVPAFGEVGIKK+YNGAIAYTPDGSP IGPAPGLKNFWLNEGHSFGVTAAGGAGWQ+AEWIV+GEP+IDMMGVDPRRFGPYAT+GYLIEKNEEAYANVFTMHYPDEERAAARPLKTTP+YDRLK  GAVFGSVYGWERANWFAPEGY VPA E+ +GADVLT+ NHAP LEDG IVERWSFRRSNY EHVGNEVK V
Sbjct:  194 ILAEHVVSCTGNFARKTGEMVGLDVPVIPVEHQYIVTEPHPAIVERKSQGLPEMGVLRESDSSWYMREENGGLLLGPYEHGAPVCYVDGPSDDSEYELFQEDLERLMPHIETAIARVPAFGEVGIKKVYNGAIAYTPDGSPIIGPAPGLKNFWLNEGHSFGVTAAGGAGWQLAEWIVDGEPTIDMMGVDPRRFGPYATQGYLIEKNEEAYANVFTMHYPDEERAAARPLKTTPVYDRLKKHGAVFGSVYGWERANWFAPEGYEVPADEIGVGADVLTNENHAPPLEDGRIVERWSFRRSNYFEHVGNEVKNV 505          
BLAST of mRNA_L-digitata_M_contig100424.1.1 vs. uniprot
Match: A0A562CVR1_9HYPH (Dimethylglycine dehydrogenase n=2 Tax=Phyllobacteriaceae TaxID=69277 RepID=A0A562CVR1_9HYPH)

HSP 1 Score: 599 bits (1544), Expect = 3.820e-208
Identity = 278/312 (89.10%), Postives = 293/312 (93.91%), Query Frame = 1
Query:    1 ITCDHIVSCTGNFARKTGAMVGLNVPVIPVEHQYIVTEPHPAIVERKAKGLPEMGVLRESDSSWYMREENGGLLLGPYEHGAPACYVDGPSDDSEYELFQEDLERLMPHVETAIARVPAFGEVGIKKIYNGAIAYTPDGSPAIGPAPGLKNFWLNEGHSFGVTAAGGAGWQIAEWIVEGEPSIDMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEERAAARPLKTTPIYDRLKARGAVFGSVYGWERANWFAPEGYTVPAGELDIGADVLTDHNHAPALEDGLIVERWSFRRSNYHEHVGNEVKTV 936
            IT +H+VSCTGNFARKTG MVG+N+PVIPVEHQYIVTEPHPAI+ERK +GLPEMGVLRESDSSWYMREENGGLLLGPYE GAP CYVDGPSDDSEYELFQEDLERLMPHV+TAIARVPAFGEVGIKKIYNGAIAYTPDGSP IGPAPGL NFWLNEGHSFGVTAAGGAGWQ+AEWIV+GEP+IDMMGVDPRRFGPYATEGYL EKNEEAYANVFTMHYPDEERAAARPLKTTP+YDRLK  GAVFGSVYGWERANWFAPEGY VP  EL +GADVLT+HNHA  LEDG IVE+WSFRRSNY EH+GNEVK V
Sbjct:  194 ITAEHVVSCTGNFARKTGEMVGINIPVIPVEHQYIVTEPHPAILERKKQGLPEMGVLRESDSSWYMREENGGLLLGPYEKGAPVCYVDGPSDDSEYELFQEDLERLMPHVDTAIARVPAFGEVGIKKIYNGAIAYTPDGSPIIGPAPGLNNFWLNEGHSFGVTAAGGAGWQLAEWIVDGEPTIDMMGVDPRRFGPYATEGYLKEKNEEAYANVFTMHYPDEERAAARPLKTTPVYDRLKKLGAVFGSVYGWERANWFAPEGYEVPKEELGVGADVLTNHNHAEPLEDGRIVEKWSFRRSNYFEHIGNEVKNV 505          
BLAST of mRNA_L-digitata_M_contig100424.1.1 vs. uniprot
Match: W6VXB0_RHIS8 (Dimethylglycine dehydrogenase n=22 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=W6VXB0_RHIS8)

HSP 1 Score: 595 bits (1534), Expect = 1.240e-206
Identity = 271/312 (86.86%), Postives = 293/312 (93.91%), Query Frame = 1
Query:    1 ITCDHIVSCTGNFARKTGAMVGLNVPVIPVEHQYIVTEPHPAIVERKAKGLPEMGVLRESDSSWYMREENGGLLLGPYEHGAPACYVDGPSDDSEYELFQEDLERLMPHVETAIARVPAFGEVGIKKIYNGAIAYTPDGSPAIGPAPGLKNFWLNEGHSFGVTAAGGAGWQIAEWIVEGEPSIDMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEERAAARPLKTTPIYDRLKARGAVFGSVYGWERANWFAPEGYTVPAGELDIGADVLTDHNHAPALEDGLIVERWSFRRSNYHEHVGNEVKTV 936
            IT +HI+SCTGNFARKTG MVG+N+PVIPVEHQYIVTEPHPAI ERKAKGLPEMGVLRESDSSWYMREENGGLLLGPYE GAP CYVDGPSD+SEYELF EDL+RLMP++ETAI RVPAFGEVGIKK+YNGAIAYTPDGSP +GPAPGL+NFWLNEGHSFG+TAAGGAGWQ+AEWIV+GEP++DMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEER+AARPLKTTP+YDRLK  GAVFGSVYGWERANWFAPEGY VP  EL +G DVLT HNHAPALEDG IVE+WSFRRSNY +HVGNE+K V
Sbjct:  194 ITAEHIISCTGNFARKTGEMVGINIPVIPVEHQYIVTEPHPAIQERKAKGLPEMGVLRESDSSWYMREENGGLLLGPYEVGAPVCYVDGPSDESEYELFNEDLDRLMPYIETAIVRVPAFGEVGIKKVYNGAIAYTPDGSPIVGPAPGLRNFWLNEGHSFGITAAGGAGWQLAEWIVDGEPTVDMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEERSAARPLKTTPVYDRLKKMGAVFGSVYGWERANWFAPEGYEVPKEELGVGVDVLTAHNHAPALEDGRIVEKWSFRRSNYFDHVGNEIKNV 505          
BLAST of mRNA_L-digitata_M_contig100424.1.1 vs. uniprot
Match: A0A3Q8XNK7_9HYPH (FAD-dependent oxidoreductase n=1 Tax=Georhizobium profundi TaxID=2341112 RepID=A0A3Q8XNK7_9HYPH)

HSP 1 Score: 592 bits (1525), Expect = 2.760e-205
Identity = 273/312 (87.50%), Postives = 289/312 (92.63%), Query Frame = 1
Query:    1 ITCDHIVSCTGNFARKTGAMVGLNVPVIPVEHQYIVTEPHPAIVERKAKGLPEMGVLRESDSSWYMREENGGLLLGPYEHGAPACYVDGPSDDSEYELFQEDLERLMPHVETAIARVPAFGEVGIKKIYNGAIAYTPDGSPAIGPAPGLKNFWLNEGHSFGVTAAGGAGWQIAEWIVEGEPSIDMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEERAAARPLKTTPIYDRLKARGAVFGSVYGWERANWFAPEGYTVPAGELDIGADVLTDHNHAPALEDGLIVERWSFRRSNYHEHVGNEVKTV 936
            I  DH+VS TGNFAR TGAMVGLNVPVIPVEHQYIVTEPHPAIVER+ +GLPEMGVLRESDSSWYMREENGGLLLGPYE GAP CYVDGPS DSEYELFQEDL+RLMPH+ETAI RVPAFGEVGIKK+YNGAIAYTPDGSP +GPAPGLKNFWLNEGHSFG+TAAGGAGWQ+AEWIV+GEP+IDMMGVDPRRFGPYATEGYL EKNEEAYANVFTMHYPDEER AARPLKTTP+YDRLK+ G VFGSVYGWERANWFAPEGY VPA E+ +G DVLT+HNHA  LEDG IVERWSFRRSNY EHVGNEVK V
Sbjct:  194 IVADHVVSATGNFARNTGAMVGLNVPVIPVEHQYIVTEPHPAIVERRKQGLPEMGVLRESDSSWYMREENGGLLLGPYEQGAPVCYVDGPSADSEYELFQEDLDRLMPHIETAITRVPAFGEVGIKKVYNGAIAYTPDGSPIVGPAPGLKNFWLNEGHSFGITAAGGAGWQLAEWIVDGEPTIDMMGVDPRRFGPYATEGYLKEKNEEAYANVFTMHYPDEERGAARPLKTTPVYDRLKSLGGVFGSVYGWERANWFAPEGYAVPAEEIGVGVDVLTNHNHAAPLEDGRIVERWSFRRSNYFEHVGNEVKNV 505          
BLAST of mRNA_L-digitata_M_contig100424.1.1 vs. uniprot
Match: UPI000C17C499 (FAD-dependent oxidoreductase n=1 Tax=Pararhizobium haloflavum TaxID=2037914 RepID=UPI000C17C499)

HSP 1 Score: 590 bits (1522), Expect = 7.850e-205
Identity = 272/312 (87.18%), Postives = 291/312 (93.27%), Query Frame = 1
Query:    1 ITCDHIVSCTGNFARKTGAMVGLNVPVIPVEHQYIVTEPHPAIVERKAKGLPEMGVLRESDSSWYMREENGGLLLGPYEHGAPACYVDGPSDDSEYELFQEDLERLMPHVETAIARVPAFGEVGIKKIYNGAIAYTPDGSPAIGPAPGLKNFWLNEGHSFGVTAAGGAGWQIAEWIVEGEPSIDMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEERAAARPLKTTPIYDRLKARGAVFGSVYGWERANWFAPEGYTVPAGELDIGADVLTDHNHAPALEDGLIVERWSFRRSNYHEHVGNEVKTV 936
            I  DH+VS TGNFAR+TGAMVGLNVPVIPVEHQYIVTEPHPAIVERK +GLPEMGVLRE+DSSWYMREENGGLLLGPYE GAP CY+DGP+DDSEYELFQEDL+RLMPH+ETAI RVPAFGEVGIKK+YNGAIAYTPDGSP +GPAPGLKNFWLNEGHSFGVTAAGGAGWQ+AEWIV+GEP+IDMMGVDPRRFGPYATEGYL EKNEEAYANVFTMHYPDEERAAARPLKTTP+YDRLK  GAVFGSVYGWERANWFAP+GY VP  +L +G DVLT+HNHA  L+DG IVERWSFRRSNY EHVGNEVK V
Sbjct:  194 IVADHVVSATGNFARRTGAMVGLNVPVIPVEHQYIVTEPHPAIVERKKQGLPEMGVLREADSSWYMREENGGLLLGPYEKGAPCCYMDGPTDDSEYELFQEDLDRLMPHIETAITRVPAFGEVGIKKVYNGAIAYTPDGSPIVGPAPGLKNFWLNEGHSFGVTAAGGAGWQLAEWIVDGEPTIDMMGVDPRRFGPYATEGYLKEKNEEAYANVFTMHYPDEERAAARPLKTTPVYDRLKKMGAVFGSVYGWERANWFAPDGYFVPPEQLGVGVDVLTNHNHAAPLDDGRIVERWSFRRSNYFEHVGNEVKNV 505          
BLAST of mRNA_L-digitata_M_contig100424.1.1 vs. uniprot
Match: A0A7W6MSE8_9HYPH (Dimethylglycine dehydrogenase n=50 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A7W6MSE8_9HYPH)

HSP 1 Score: 590 bits (1521), Expect = 1.220e-204
Identity = 266/312 (85.26%), Postives = 291/312 (93.27%), Query Frame = 1
Query:    1 ITCDHIVSCTGNFARKTGAMVGLNVPVIPVEHQYIVTEPHPAIVERKAKGLPEMGVLRESDSSWYMREENGGLLLGPYEHGAPACYVDGPSDDSEYELFQEDLERLMPHVETAIARVPAFGEVGIKKIYNGAIAYTPDGSPAIGPAPGLKNFWLNEGHSFGVTAAGGAGWQIAEWIVEGEPSIDMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEERAAARPLKTTPIYDRLKARGAVFGSVYGWERANWFAPEGYTVPAGELDIGADVLTDHNHAPALEDGLIVERWSFRRSNYHEHVGNEVKTV 936
            IT +H++SCTGNFARKTG MVG+N+PVIPVEHQYIVTEPHPAIVERKAKG+PEMGVLRESDS+WYMREENGGLLLGPYEHGAP CYVDGPSD+SEYELFQE+L+RLMPH+ETA+ RVPAFGEVGIKK+YNGAIAYTPDG+P +GPAPGLKNFWLNEGHSFG+TAAGGAGWQ+AEWIV+GE ++DMMG DPRRFGPYATEGYLI KNEEAYANVFTMHYPDEERAAARPLKTTP+YDRLK  GAVFGSVYGWERANWFAPEGY VP  EL +G DVLT HN+AP  EDG +VE+WSFRRSNY EHVGNEVK V
Sbjct:  196 ITAEHVISCTGNFARKTGEMVGINIPVIPVEHQYIVTEPHPAIVERKAKGMPEMGVLRESDSAWYMREENGGLLLGPYEHGAPVCYVDGPSDESEYELFQEELDRLMPHIETAMVRVPAFGEVGIKKVYNGAIAYTPDGNPIVGPAPGLKNFWLNEGHSFGITAAGGAGWQLAEWIVDGESTLDMMGADPRRFGPYATEGYLIAKNEEAYANVFTMHYPDEERAAARPLKTTPVYDRLKTMGAVFGSVYGWERANWFAPEGYEVPKEELGVGVDVLTSHNYAPPTEDGRVVEKWSFRRSNYFEHVGNEVKHV 507          
BLAST of mRNA_L-digitata_M_contig100424.1.1 vs. uniprot
Match: A0A2E0J7S8_9HYPH (Dimethylglycine dehydrogenase n=11 Tax=Proteobacteria TaxID=1224 RepID=A0A2E0J7S8_9HYPH)

HSP 1 Score: 590 bits (1520), Expect = 1.730e-204
Identity = 274/312 (87.82%), Postives = 290/312 (92.95%), Query Frame = 1
Query:    1 ITCDHIVSCTGNFARKTGAMVGLNVPVIPVEHQYIVTEPHPAIVERKAKGLPEMGVLRESDSSWYMREENGGLLLGPYEHGAPACYVDGPSDDSEYELFQEDLERLMPHVETAIARVPAFGEVGIKKIYNGAIAYTPDGSPAIGPAPGLKNFWLNEGHSFGVTAAGGAGWQIAEWIVEGEPSIDMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEERAAARPLKTTPIYDRLKARGAVFGSVYGWERANWFAPEGYTVPAGELDIGADVLTDHNHAPALEDGLIVERWSFRRSNYHEHVGNEVKTV 936
            I C+H++SCTGNFAR+TGAMVGL+VPVIPVEHQYIVTEPHPAIV RK +GLPEMGVLRESDSSWYMREENGGLLLGPYE GAP CYVDGP+DDSEYELFQEDLERLMP+VETAIARVPAFGEVGIKKIYNGAIAYTPDGSP IGPAPGLKNFWLNEGHSFGVTAAGGAGWQ+AEWIVEGEPSIDMMGVDPRRFGPYATEGYL EKNEEAYANVFT+HYPDEER AARPLKTTP Y+R+K  GAVFGSVYGWER NWFAPEGY VP  EL +GADVL  HNHAPAL DG +VE+WSFRRSNY EHVGNEV+ V
Sbjct:  194 IACEHVISCTGNFARRTGAMVGLDVPVIPVEHQYIVTEPHPAIVARKKEGLPEMGVLRESDSSWYMREENGGLLLGPYEVGAPCCYVDGPTDDSEYELFQEDLERLMPYVETAIARVPAFGEVGIKKIYNGAIAYTPDGSPIIGPAPGLKNFWLNEGHSFGVTAAGGAGWQLAEWIVEGEPSIDMMGVDPRRFGPYATEGYLREKNEEAYANVFTVHYPDEERPAARPLKTTPSYERMKKLGAVFGSVYGWERPNWFAPEGYQVPESELGVGADVLLKHNHAPALADGRVVEKWSFRRSNYFEHVGNEVRNV 505          
BLAST of mRNA_L-digitata_M_contig100424.1.1 vs. uniprot
Match: A0A4U6CA56_9HYPH (FAD-dependent oxidoreductase n=1 Tax=Aquamicrobium sp. LC103 TaxID=1120658 RepID=A0A4U6CA56_9HYPH)

HSP 1 Score: 589 bits (1518), Expect = 3.260e-204
Identity = 274/312 (87.82%), Postives = 290/312 (92.95%), Query Frame = 1
Query:    1 ITCDHIVSCTGNFARKTGAMVGLNVPVIPVEHQYIVTEPHPAIVERKAKGLPEMGVLRESDSSWYMREENGGLLLGPYEHGAPACYVDGPSDDSEYELFQEDLERLMPHVETAIARVPAFGEVGIKKIYNGAIAYTPDGSPAIGPAPGLKNFWLNEGHSFGVTAAGGAGWQIAEWIVEGEPSIDMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEERAAARPLKTTPIYDRLKARGAVFGSVYGWERANWFAPEGYTVPAGELDIGADVLTDHNHAPALEDGLIVERWSFRRSNYHEHVGNEVKTV 936
            I  +H+VS TGNFAR+TGAMVGL+VPVIPVEHQYIVTEPHP IVERK +GLPEMGVLRESDSSWYMREENGGLLLGPYE GAP CYVDGPSDDSEYELFQEDLERLMPH+E AIARVPAFGEVGIKK+YNGAIAYTPDGSP IGPAPGLKNFWLNEGHSFGVTAAGGAGWQ+AEWIV+GEPSIDMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEERAAARPLKTTP+YDRLK  GAVFGSVYGWERANW+AP G+ VP  +L +GADVLT  NHAP LEDG IVE+WSFRRSNY EHVGNEV+ V
Sbjct:  194 IVAEHVVSATGNFARRTGAMVGLDVPVIPVEHQYIVTEPHPVIVERKRQGLPEMGVLRESDSSWYMREENGGLLLGPYEKGAPVCYVDGPSDDSEYELFQEDLERLMPHIEAAIARVPAFGEVGIKKVYNGAIAYTPDGSPIIGPAPGLKNFWLNEGHSFGVTAAGGAGWQLAEWIVDGEPSIDMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEERAAARPLKTTPLYDRLKKLGAVFGSVYGWERANWYAPAGHEVPKEQLGVGADVLTGENHAPPLEDGRIVEKWSFRRSNYFEHVGNEVRNV 505          
BLAST of mRNA_L-digitata_M_contig100424.1.1 vs. uniprot
Match: K2MJN9_9HYPH (Dimethylglycine dehydrogenase-like protein n=2 Tax=Nitratireductor TaxID=245876 RepID=K2MJN9_9HYPH)

HSP 1 Score: 589 bits (1518), Expect = 3.470e-204
Identity = 275/312 (88.14%), Postives = 289/312 (92.63%), Query Frame = 1
Query:    1 ITCDHIVSCTGNFARKTGAMVGLNVPVIPVEHQYIVTEPHPAIVERKAKGLPEMGVLRESDSSWYMREENGGLLLGPYEHGAPACYVDGPSDDSEYELFQEDLERLMPHVETAIARVPAFGEVGIKKIYNGAIAYTPDGSPAIGPAPGLKNFWLNEGHSFGVTAAGGAGWQIAEWIVEGEPSIDMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEERAAARPLKTTPIYDRLKARGAVFGSVYGWERANWFAPEGYTVPAGELDIGADVLTDHNHAPALEDGLIVERWSFRRSNYHEHVGNEVKTV 936
            I C+H+VSCTGNFAR+TGAMVGL+VPVIPVEHQYIVTEPHPAIV R+ +GLPEMGVLRESDSSWYMREENGGLLLGPYE GAP CYVDGPSDDSEYELFQEDLERLMP+VETAIARVPAFGEVGIKKIYNGAIAYTPDGSP IGPAPGLKNFWLNEGHSFGVTAAGGAGWQ+AEWIV GEPSIDMMGVDPRRFGPYATEGYL EKNEEAYANVFT HYPDEER+AARPLKTTP Y R+ A GAVFGSVYGWER NWFAPEGY VP GEL +GADVL DHNHAPAL DG +VE+WSFRRSNY EHVG EV+ V
Sbjct:  194 IACEHVVSCTGNFARRTGAMVGLDVPVIPVEHQYIVTEPHPAIVARRKEGLPEMGVLRESDSSWYMREENGGLLLGPYEVGAPCCYVDGPSDDSEYELFQEDLERLMPYVETAIARVPAFGEVGIKKIYNGAIAYTPDGSPIIGPAPGLKNFWLNEGHSFGVTAAGGAGWQLAEWIVGGEPSIDMMGVDPRRFGPYATEGYLREKNEEAYANVFTPHYPDEERSAARPLKTTPCYGRMAALGAVFGSVYGWERPNWFAPEGYAVPEGELGVGADVLLDHNHAPALPDGRVVEKWSFRRSNYFEHVGREVRNV 505          
BLAST of mRNA_L-digitata_M_contig100424.1.1 vs. uniprot
Match: A0A8J6PIT5_9HYPH (GcvT family protein n=1 Tax=Oryzicola mucosus TaxID=2767425 RepID=A0A8J6PIT5_9HYPH)

HSP 1 Score: 587 bits (1514), Expect = 1.270e-203
Identity = 269/312 (86.22%), Postives = 292/312 (93.59%), Query Frame = 1
Query:    1 ITCDHIVSCTGNFARKTGAMVGLNVPVIPVEHQYIVTEPHPAIVERKAKGLPEMGVLRESDSSWYMREENGGLLLGPYEHGAPACYVDGPSDDSEYELFQEDLERLMPHVETAIARVPAFGEVGIKKIYNGAIAYTPDGSPAIGPAPGLKNFWLNEGHSFGVTAAGGAGWQIAEWIVEGEPSIDMMGVDPRRFGPYATEGYLIEKNEEAYANVFTMHYPDEERAAARPLKTTPIYDRLKARGAVFGSVYGWERANWFAPEGYTVPAGELDIGADVLTDHNHAPALEDGLIVERWSFRRSNYHEHVGNEVKTV 936
            IT +H++S TGNFARKTG MVG+++PVIPVEHQYIVTEPHPAIVERK KGLPEMGVLRESDSSWYMREENGGLLLGPYE GAP CYVD PSDDSEYELFQEDLERL P++ETAIARVPAFGEVGIKK+YNGAIAYTPDGSP IGPAPGLKNFWLNEGHSFGVTAAGGAGWQ+AEWIV+GEP+IDMMGVDPRRFGPYATEGYLI KNEEAYANVFTMHYPDEER+AARPLKTTP+YDR+K+ GAVFGSVYGWER NWFAP+GY+VP  +L +GADVLT  NHAPALEDG +VE+WSFRRSNY EHVGNEV+ V
Sbjct:  194 ITAEHVISATGNFARKTGKMVGIDIPVIPVEHQYIVTEPHPAIVERKKKGLPEMGVLRESDSSWYMREENGGLLLGPYEKGAPVCYVDAPSDDSEYELFQEDLERLEPYIETAIARVPAFGEVGIKKVYNGAIAYTPDGSPIIGPAPGLKNFWLNEGHSFGVTAAGGAGWQLAEWIVDGEPTIDMMGVDPRRFGPYATEGYLIAKNEEAYANVFTMHYPDEERSAARPLKTTPVYDRMKSLGAVFGSVYGWERPNWFAPDGYSVPEDQLGVGADVLTSENHAPALEDGRVVEKWSFRRSNYFEHVGNEVRNV 505          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100424.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00145D502D4.760e-21290.38FAD-dependent oxidoreductase n=1 Tax=Chelativorans... [more]
A0A562CVR1_9HYPH3.820e-20889.10Dimethylglycine dehydrogenase n=2 Tax=Phyllobacter... [more]
W6VXB0_RHIS81.240e-20686.86Dimethylglycine dehydrogenase n=22 Tax=Rhizobium/A... [more]
A0A3Q8XNK7_9HYPH2.760e-20587.50FAD-dependent oxidoreductase n=1 Tax=Georhizobium ... [more]
UPI000C17C4997.850e-20587.18FAD-dependent oxidoreductase n=1 Tax=Pararhizobium... [more]
A0A7W6MSE8_9HYPH1.220e-20485.26Dimethylglycine dehydrogenase n=50 Tax=Rhizobium/A... [more]
A0A2E0J7S8_9HYPH1.730e-20487.82Dimethylglycine dehydrogenase n=11 Tax=Proteobacte... [more]
A0A4U6CA56_9HYPH3.260e-20487.82FAD-dependent oxidoreductase n=1 Tax=Aquamicrobium... [more]
K2MJN9_9HYPH3.470e-20488.14Dimethylglycine dehydrogenase-like protein n=2 Tax... [more]
A0A8J6PIT5_9HYPH1.270e-20386.22GcvT family protein n=1 Tax=Oryzicola mucosus TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100424contigL-digitata_M_contig100424:6..941 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1381123.AYOD01000002_gene699
Preferred namedmgdh2
PFAMsDAO,FAO_M,GCV_T,GCV_T_C
Model size936
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00181
KEGG koko:K00315
KEGG ReactionR01565
KEGG Pathwayko00260,ko01100,map00260,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.44e-209
EggNOG OGsCOG0404@1|root,COG0665@1|root,COG0404@2|Bacteria,COG0665@2|Bacteria,1MUXJ@1224|Proteobacteria,2TRGS@28211|Alphaproteobacteria,43HUP@69277|Phyllobacteriaceae
EC1.5.8.4
DescriptionBelongs to the GcvT family
Cds size936
COG categoryE
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406607.1266046-CDS-L-digitata_M_contig100424:5..9411682406607.1266046-CDS-L-digitata_M_contig100424:5..941Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig100424 6..941 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100424.1.1prot_L-digitata_M_contig100424.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig100424 6..941 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig100424.1.1

>prot_L-digitata_M_contig100424.1.1 ID=prot_L-digitata_M_contig100424.1.1|Name=mRNA_L-digitata_M_contig100424.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=312bp
ITCDHIVSCTGNFARKTGAMVGLNVPVIPVEHQYIVTEPHPAIVERKAKG
LPEMGVLRESDSSWYMREENGGLLLGPYEHGAPACYVDGPSDDSEYELFQ
EDLERLMPHVETAIARVPAFGEVGIKKIYNGAIAYTPDGSPAIGPAPGLK
NFWLNEGHSFGVTAAGGAGWQIAEWIVEGEPSIDMMGVDPRRFGPYATEG
YLIEKNEEAYANVFTMHYPDEERAAARPLKTTPIYDRLKARGAVFGSVYG
WERANWFAPEGYTVPAGELDIGADVLTDHNHAPALEDGLIVERWSFRRSN
YHEHVGNEVKTV
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mRNA from alignment at L-digitata_M_contig100424:6..941+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig100424.1.1 ID=mRNA_L-digitata_M_contig100424.1.1|Name=mRNA_L-digitata_M_contig100424.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=936bp|location=Sequence derived from alignment at L-digitata_M_contig100424:6..941+ (Laminaria digitata LdigPH10_18mv male)
ATCACCTGCGATCACATCGTCTCCTGCACCGGCAATTTCGCTCGCAAGAC AGGCGCGATGGTCGGTCTCAATGTGCCGGTGATTCCCGTTGAGCATCAAT ACATCGTCACTGAGCCGCATCCGGCGATTGTCGAGCGTAAGGCCAAGGGT CTGCCTGAAATGGGCGTGCTGCGCGAAAGCGATTCCTCCTGGTATATGCG CGAGGAAAATGGCGGCCTGCTGCTTGGCCCCTATGAGCATGGTGCGCCGG CCTGCTATGTTGATGGACCATCCGACGACAGCGAATATGAGCTGTTTCAG GAGGATCTGGAGCGTCTGATGCCGCATGTGGAGACGGCAATTGCCCGCGT TCCGGCCTTTGGCGAGGTTGGTATCAAGAAAATCTATAATGGCGCGATTG CCTATACGCCGGACGGTTCGCCGGCAATCGGGCCTGCGCCGGGCCTCAAA AACTTCTGGTTGAATGAGGGCCATTCCTTTGGCGTTACCGCTGCCGGCGG CGCAGGCTGGCAAATCGCCGAATGGATCGTCGAGGGTGAACCGTCCATCG ACATGATGGGTGTCGATCCGCGCCGTTTCGGCCCTTACGCCACAGAAGGT TATCTCATTGAGAAAAATGAGGAAGCCTATGCCAATGTCTTCACCATGCA TTATCCCGACGAAGAGCGGGCTGCGGCGCGTCCGCTCAAGACCACGCCCA TCTATGATCGCCTCAAGGCGCGTGGCGCGGTGTTCGGCTCGGTCTATGGC TGGGAGCGTGCCAACTGGTTCGCACCGGAGGGTTACACGGTGCCTGCGGG TGAGCTTGATATCGGCGCTGATGTGCTGACCGATCATAATCATGCGCCGG CCCTCGAAGACGGTCTTATCGTCGAGAGGTGGTCGTTCCGCCGCTCCAAC TATCATGAGCATGTCGGCAACGAAGTGAAGACGGTT
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Coding sequence (CDS) from alignment at L-digitata_M_contig100424:6..941+

>mRNA_L-digitata_M_contig100424.1.1 ID=mRNA_L-digitata_M_contig100424.1.1|Name=mRNA_L-digitata_M_contig100424.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=936bp|location=Sequence derived from alignment at L-digitata_M_contig100424:6..941+ (Laminaria digitata LdigPH10_18mv male)
ATCACCTGCGATCACATCGTCTCCTGCACCGGCAATTTCGCTCGCAAGAC
AGGCGCGATGGTCGGTCTCAATGTGCCGGTGATTCCCGTTGAGCATCAAT
ACATCGTCACTGAGCCGCATCCGGCGATTGTCGAGCGTAAGGCCAAGGGT
CTGCCTGAAATGGGCGTGCTGCGCGAAAGCGATTCCTCCTGGTATATGCG
CGAGGAAAATGGCGGCCTGCTGCTTGGCCCCTATGAGCATGGTGCGCCGG
CCTGCTATGTTGATGGACCATCCGACGACAGCGAATATGAGCTGTTTCAG
GAGGATCTGGAGCGTCTGATGCCGCATGTGGAGACGGCAATTGCCCGCGT
TCCGGCCTTTGGCGAGGTTGGTATCAAGAAAATCTATAATGGCGCGATTG
CCTATACGCCGGACGGTTCGCCGGCAATCGGGCCTGCGCCGGGCCTCAAA
AACTTCTGGTTGAATGAGGGCCATTCCTTTGGCGTTACCGCTGCCGGCGG
CGCAGGCTGGCAAATCGCCGAATGGATCGTCGAGGGTGAACCGTCCATCG
ACATGATGGGTGTCGATCCGCGCCGTTTCGGCCCTTACGCCACAGAAGGT
TATCTCATTGAGAAAAATGAGGAAGCCTATGCCAATGTCTTCACCATGCA
TTATCCCGACGAAGAGCGGGCTGCGGCGCGTCCGCTCAAGACCACGCCCA
TCTATGATCGCCTCAAGGCGCGTGGCGCGGTGTTCGGCTCGGTCTATGGC
TGGGAGCGTGCCAACTGGTTCGCACCGGAGGGTTACACGGTGCCTGCGGG
TGAGCTTGATATCGGCGCTGATGTGCTGACCGATCATAATCATGCGCCGG
CCCTCGAAGACGGTCTTATCGTCGAGAGGTGGTCGTTCCGCCGCTCCAAC
TATCATGAGCATGTCGGCAACGAAGTGAAGACGGTT
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