prot_L-digitata_M_contig10034.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10034.1.1
Unique Nameprot_L-digitata_M_contig10034.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length156
Homology
BLAST of mRNA_L-digitata_M_contig10034.1.1 vs. uniprot
Match: D7FJP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP5_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 2.100e-31
Identity = 91/193 (47.15%), Postives = 110/193 (56.99%), Query Frame = 0
Query:    1 MPALAPYAKAALAGRQTVAKFRGDAPPEAIRLYLVNVRLPNVGTDILITVNAPYPDEDTAATSMADADTFTADRP--------------PIVEQTHTSQRGNGPGEEALAAEVEGGAE---------------DGVGVA--PEGLPEVAEAGGVGGRRGSVQGSAG--------VSALRSLLRSFKILDWSLF 154
            MP LA Y K+ALAGRQTVAKFR DAPP+A+RLYLVNVRLPNVGTD+LITVN P PD+DTA  +MA A+ F +                 P+++   TS+  +G    A A     G +               DGVG    PEG  E+ EAG VG  +G    S G        V+ALR+LL+SF ILDWSLF
Sbjct:  105 MPKLASYTKSALAGRQTVAKFRQDAPPDAVRLYLVNVRLPNVGTDLLITVNVPCPDQDTAVRTMAGAECFCSGPSRHTAGANEEISTGAPLIDANKTSETASGA--HAAADGTAAGTDKPFKSAADFSPEATVDGVGGVDKPEGSGEI-EAG-VGEGKGEKHSSPGGGDDVDLGVAALRTLLQSFAILDWSLF 293          
BLAST of mRNA_L-digitata_M_contig10034.1.1 vs. uniprot
Match: W7TBW4_9STRA (Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBW4_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.070e-5
Identity = 32/65 (49.23%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    1 MPALAPYAKAALAGRQTVAKFRG-DAPPEAIRLYLVNVRLPNVGTDILITVNAPYPDEDTAATSM 64
            +P LA Y   AL G QTV+KF   DA    +R+YLVNVRL   GTD+L+T+N P   +  AA S 
Sbjct:  102 VPNLAAYPTYALVGTQTVSKFHAADAALLPVRIYLVNVRLQQTGTDVLLTLNLPALAQAPAAASF 166          
BLAST of mRNA_L-digitata_M_contig10034.1.1 vs. uniprot
Match: A0A4D9D6F2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6F2_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 5.890e-5
Identity = 31/65 (47.69%), Postives = 38/65 (58.46%), Query Frame = 0
Query:    1 MPALAPYAKAALAGRQTVAKFRG-DAPPEAIRLYLVNVRLPNVGTDILITVNAPYPDEDTAATSM 64
            +P LA Y   AL G Q V KF   DA    +R+YLVNVRL   GTD+L+T+N P   +  AA S 
Sbjct:   86 VPNLAAYPTYALIGTQNVTKFHAADAALLPVRIYLVNVRLQQTGTDVLLTLNLPALAQAPAAASF 150          
BLAST of mRNA_L-digitata_M_contig10034.1.1 vs. uniprot
Match: A0A7S0SXI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXI9_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 9.260e-5
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    7 YAKAALAGRQTVAKFRGDA--PPEAIRLYLVNVRLPNVGTDILITVNAP 53
            YAK  L G+Q+V KFR  A  P + I ++LV +RL N+GTD+LIT NAP
Sbjct:   26 YAKCMLIGKQSVVKFRKKAGSPLDDIIIFLVVIRLANMGTDLLITYNAP 74          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10034.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FJP5_ECTSI2.100e-3147.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TBW4_9STRA1.070e-549.23Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich n=1 T... [more]
A0A4D9D6F2_9STRA5.890e-547.69Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0SXI9_9STRA9.260e-555.10Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 2..101
e-value: 4.2E-9
score: 38.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..102
IPR007681Ran-interacting Mog1 proteinPFAMPF04603Mog1coord: 8..53
e-value: 1.4E-6
score: 28.7
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 11..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10034contigL-digitata_M_contig10034:1372..2744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10034.1.1mRNA_L-digitata_M_contig10034.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10034 164..2744 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10034.1.1 ID=prot_L-digitata_M_contig10034.1.1|Name=mRNA_L-digitata_M_contig10034.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=156bp
MPALAPYAKAALAGRQTVAKFRGDAPPEAIRLYLVNVRLPNVGTDILITV
NAPYPDEDTAATSMADADTFTADRPPIVEQTHTSQRGNGPGEEALAAEVE
GGAEDGVGVAPEGLPEVAEAGGVGGRRGSVQGSAGVSALRSLLRSFKILD
WSLFC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007681Mog1
IPR016123Mog1/PsbP_a/b/a-sand