mRNA_L-digitata_M_contig102347.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig102347.2.1 vs. uniprot
Match: A0A7V6ZIR6_9HYPH (Flagellin n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A7V6ZIR6_9HYPH) HSP 1 Score: 249 bits (637), Expect = 7.710e-80 Identity = 151/212 (71.23%), Postives = 179/212 (84.43%), Query Frame = 1
Query: 1 IVAAREPGVDRAKIQSEIDQLQEQLFSNAEASSFTGENWLAVDSTLPDYSATKSIVSSFTRTST-SVSVETIDINVAGIELFDAADQSGILDSTFTTTGAGAVTXXXXXXXXXXXXXXXXXIDDMISNVDAKLQGLTTAASDLGAIKKRLSMQMDFVSNLMDAIDRGIGTLVDADMSEESTRLQALQTQQQLGVQSLAIANTTSQNILTLFQ 633
+VAA+EPGVD++KIQSEI QLQEQL S A ++SF+GENWL+VDS+ YSATKS+V+SF R S SVSV TIDI+V G +LFDAADQSGILD+ FTTTG GAVT XXXXXXXXXXX +D+MIS VD+ L +TT+ASDLGA KKR+ MQ DFVS LMDAIDRG+GTLVDADM+EESTRLQALQ QQQLG+Q+L+IAN+ SQ IL+LF+
Sbjct: 95 LVAAKEPGVDKSKIQSEISQLQEQLTSIAGSASFSGENWLSVDSSATGYSATKSLVASFNRASDGSVSVSTIDISVTGTKLFDAADQSGILDTEFTTTGGGAVTVXXXXXXXXXXXIDDTDLDEMISAVDSALASMTTSASDLGAAKKRVDMQKDFVSGLMDAIDRGVGTLVDADMNEESTRLQALQVQQQLGIQALSIANSNSQQILSLFR 306
BLAST of mRNA_L-digitata_M_contig102347.2.1 vs. uniprot
Match: A0A2G1QJU5_9HYPH (Flagellin n=1 Tax=Zhengella mangrovi TaxID=1982044 RepID=A0A2G1QJU5_9HYPH) HSP 1 Score: 241 bits (614), Expect = 2.270e-76 Identity = 131/211 (62.09%), Postives = 164/211 (77.73%), Query Frame = 1
Query: 1 IVAAREPGVDRAKIQSEIDQLQEQLFSNAEASSFTGENWLAVDSTLPDYSATKSIVSSFTRTSTSVSVETIDINVAGIELFDAADQSGILDSTFTTTGAGAVTXXXXXXXXXXXXXXXXXIDDMISNVDAKLQGLTTAASDLGAIKKRLSMQMDFVSNLMDAIDRGIGTLVDADMSEESTRLQALQTQQQLGVQSLAIANTTSQNILTLFQ 633
+VAAREPGVD++ IQSEI +LQ QL + A+++SF+GENWL+VDS +Y K +VSSFTR+ V+V TI I+ A +ELFDAADQSG++DSTFTTTG GA+T +DDMIS VDA GLT+AA+DLGA K R+SMQ DFV+ L+DAIDRGIGTLVDADM+EEST+LQALQTQQQLG+Q+L IAN+++QNIL LF+
Sbjct: 95 LVAAREPGVDKSSIQSEITELQAQLRAIAQSASFSGENWLSVDSGAANYVQVKEVVSSFTRSGAGVTVNTIQIDTANLELFDAADQSGMMDSTFTTTGTGALTVSVATLDITDPTMTNQDLDDMISAVDAAHVGLTSAAADLGATKSRISMQTDFVNTLLDAIDRGIGTLVDADMTEESTKLQALQTQQQLGIQALGIANSSAQNILALFK 305
BLAST of mRNA_L-digitata_M_contig102347.2.1 vs. uniprot
Match: A0A2E1XSU7_9HYPH (Flagellin n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A2E1XSU7_9HYPH) HSP 1 Score: 240 bits (612), Expect = 4.550e-76 Identity = 131/211 (62.09%), Postives = 166/211 (78.67%), Query Frame = 1
Query: 1 IVAAREPGVDRAKIQSEIDQLQEQLFSNAEASSFTGENWLAVDSTLPDYSATKSIVSSFTRTSTSVSVETIDINVAGIELFDAADQSGILDSTFTTTGAGAVTXXXXXXXXXXXXXXXXXIDDMISNVDAKLQGLTTAASDLGAIKKRLSMQMDFVSNLMDAIDRGIGTLVDADMSEESTRLQALQTQQQLGVQSLAIANTTSQNILTLFQ 633
+VAAREPGVD+A IQSEI +LQ QL + A+++SF+GENWL+VDS+ +Y K +VSSFTR T V+V TI I+ A IELFD ADQSG++DSTFTTTGAGA++ +DDMIS VDA LT+AA+DLGA K R+SMQ DFV+ L+DA++RGIGTLVDADM+EESTRLQALQTQQQLG+Q+L+IAN+++Q+IL+LFQ
Sbjct: 95 LVAAREPGVDKASIQSEIVELQAQLRAIADSASFSGENWLSVDSSAANYVQVKEVVSSFTRAGTGVTVNTIQIDTANIELFDDADQSGLMDSTFTTTGAGALSVSVHTLDITAAGMDNTDLDDMISAVDAAHVSLTSAAADLGATKSRISMQRDFVNTLLDAVERGIGTLVDADMTEESTRLQALQTQQQLGIQALSIANSSAQSILSLFQ 305
BLAST of mRNA_L-digitata_M_contig102347.2.1 vs. uniprot
Match: UPI00096BB38D (flagellin n=1 Tax=Salaquimonas pukyongi TaxID=2712698 RepID=UPI00096BB38D) HSP 1 Score: 238 bits (606), Expect = 3.790e-75 Identity = 129/211 (61.14%), Postives = 163/211 (77.25%), Query Frame = 1
Query: 1 IVAAREPGVDRAKIQSEIDQLQEQLFSNAEASSFTGENWLAVDSTLPDYSATKSIVSSFTRTSTSVSVETIDINVAGIELFDAADQSGILDSTFTTTGAGAVTXXXXXXXXXXXXXXXXXIDDMISNVDAKLQGLTTAASDLGAIKKRLSMQMDFVSNLMDAIDRGIGTLVDADMSEESTRLQALQTQQQLGVQSLAIANTTSQNILTLFQ 633
+VAAREPGVDRAKIQSEI +LQ QL NAEA+SF+GENWLAVDS+LP+Y+ATK +VSSF+R+ T V+V TI I++ ++L+D DQSG+LD+ TTTG GAVT ID++IS VD+ L +TT A+ LG+ + R+ +Q FVSNLMDA+DRGIG LVDAD++EESTRLQALQ QQQLG+QSL+IAN SQNIL+LF+
Sbjct: 95 LVAAREPGVDRAKIQSEISELQAQLRGNAEAASFSGENWLAVDSSLPNYTATKEVVSSFSRSDTGVAVSTITIDLTTVKLYDDNDQSGVLDTETTTTGGGAVTVSVSTLDITAANIDNTDIDELISFVDSALLQMTTTATHLGSAQARIELQQSFVSNLMDAVDRGIGQLVDADLNEESTRLQALQVQQQLGIQSLSIANANSQNILSLFR 305
BLAST of mRNA_L-digitata_M_contig102347.2.1 vs. uniprot
Match: A0A2G1QJQ1_9HYPH (Flagellin n=2 Tax=Phyllobacteriaceae TaxID=69277 RepID=A0A2G1QJQ1_9HYPH) HSP 1 Score: 236 bits (602), Expect = 1.530e-74 Identity = 132/212 (62.26%), Postives = 165/212 (77.83%), Query Frame = 1
Query: 1 IVAAREPGVDRAKIQSEIDQLQEQLFSNAEASSFTGENWLAVDSTLPDYSATKSIVSSFTRTST-SVSVETIDINVAGIELFDAADQSGILDSTFTTTGAGAVTXXXXXXXXXXXXXXXXXIDDMISNVDAKLQGLTTAASDLGAIKKRLSMQMDFVSNLMDAIDRGIGTLVDADMSEESTRLQALQTQQQLGVQSLAIANTTSQNILTLFQ 633
+VA+REPGVD++KIQSEI +LQ QL S AE++SF+GENWL+VDS+ Y ATK IV SF R S SVSV I+++ ELFDA DQSGILDSTFTTTGAGA T IDDMISNVD+ L +TTAA++LGA K R+++Q +FVSNLMD+IDRG+G LVDADM+EESTRLQALQTQQQLG+Q+L++AN++S +IL+LF+
Sbjct: 95 LVASREPGVDKSKIQSEIGELQNQLVSIAESASFSGENWLSVDSSAAGYIATKEIVGSFNRASDGSVSVGLINVDTTTTELFDANDQSGILDSTFTTTGAGAATVSVSDLDITAAGIDDTDIDDMISNVDSALSSMTTAAANLGAAKSRINIQTNFVSNLMDSIDRGVGQLVDADMTEESTRLQALQTQQQLGIQALSMANSSSSSILSLFR 306
BLAST of mRNA_L-digitata_M_contig102347.2.1 vs. uniprot
Match: A0A2E0IM92_9HYPH (Flagellin n=2 Tax=Ahrensia sp. TaxID=1872419 RepID=A0A2E0IM92_9HYPH) HSP 1 Score: 229 bits (584), Expect = 8.050e-72 Identity = 141/212 (66.51%), Postives = 175/212 (82.55%), Query Frame = 1
Query: 1 IVAAREPGVDRAKIQSEIDQLQEQLFSNAEASSFTGENWLAVDSTLPDYSATKSIVSSFTRTST-SVSVETIDINVAGIELFDAADQSGILDSTFTTTGAGAVTXXXXXXXXXXXXXXXXXIDDMISNVDAKLQGLTTAASDLGAIKKRLSMQMDFVSNLMDAIDRGIGTLVDADMSEESTRLQALQTQQQLGVQSLAIANTTSQNILTLFQ 633
+VAA+EP D+AKIQSEI +LQ QL S AE++SF GENWL+VDS+ YSATKS+V+SF+R S +VSV TID+++ ELFDA DQSGILDSTFTTTG GAV XXXXXXXXXXXXXXX +D+MI+ VD +T AAS LG+ KR+ MQ +FV NLMDA+DRG+G L+DA+M EESTRLQALQTQQQLG+QSL+IAN+++Q+IL+LF+
Sbjct: 95 LVAAKEPSADKAKIQSEISELQNQLTSIAESASFNGENWLSVDSSAGTYSATKSVVASFSRASDGTVSVSTIDVDITATELFDANDQSGILDSTFTTTGTGAVXXXXXXXXXXXXXXXXTDLDEMIAAVDTAFSSMTDAASTLGSSSKRIDMQNEFVKNLMDAVDRGVGQLIDANMEEESTRLQALQTQQQLGIQSLSIANSSAQSILSLFR 306
BLAST of mRNA_L-digitata_M_contig102347.2.1 vs. uniprot
Match: A0A7V7C201_9HYPH (Flagellin n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A7V7C201_9HYPH) HSP 1 Score: 228 bits (581), Expect = 2.510e-71 Identity = 129/214 (60.28%), Postives = 162/214 (75.70%), Query Frame = 1
Query: 1 IVAAREPGVDRAKIQSEIDQLQEQLFSNAEASSFTGENWLAVDSTLPDYSATKSIVSSFTRTST-SVSVETIDINVAGIELFDAADQSGILDSTFTTTGAGAV--TXXXXXXXXXXXXXXXXXIDDMISNVDAKLQGLTTAASDLGAIKKRLSMQMDFVSNLMDAIDRGIGTLVDADMSEESTRLQALQTQQQLGVQSLAIANTTSQNILTLFQ 633
+VAAREPGVDRAK+Q+EI Q+Q+QL A ++SF+GENWL+VDS+ PDY+ TK+IVSSF R S +VS+ TI I+V +LFDAADQSG+LDS TTT G +D+MIS VDA LQ +T +ASDLGA K R+S+Q+DFV+NLMDAIDRG+GTLVDADM+EESTRLQALQ QQQLG+Q L+IAN++ Q IL+LF+
Sbjct: 95 LVAAREPGVDRAKVQAEISQMQQQLIGIASSASFSGENWLSVDSSDPDYNDTKAIVSSFARASDGTVSIGTIAISVNSAKLFDAADQSGLLDSETTTTNGGVTYSVSTLDISTLASSDLDLADLDEMISYVDAALQAMTNSASDLGAAKSRISLQVDFVNNLMDAIDRGVGTLVDADMNEESTRLQALQVQQQLGIQGLSIANSSVQGILSLFK 308
BLAST of mRNA_L-digitata_M_contig102347.2.1 vs. uniprot
Match: A0A4R0PEH7_9HYPH (Flagellin n=1 Tax=Oricola cellulosilytica TaxID=1429082 RepID=A0A4R0PEH7_9HYPH) HSP 1 Score: 224 bits (572), Expect = 5.410e-70 Identity = 127/212 (59.91%), Postives = 158/212 (74.53%), Query Frame = 1
Query: 1 IVAAREPGVDRAKIQSEIDQLQEQLFSNAEASSFTGENWLAVDSTLPDYSATKSIVSSFTRTST-SVSVETIDINVAGIELFDAADQSGILDSTFTTTGAGAVTXXXXXXXXXXXXXXXXXIDDMISNVDAKLQGLTTAASDLGAIKKRLSMQMDFVSNLMDAIDRGIGTLVDADMSEESTRLQALQTQQQLGVQSLAIANTTSQNILTLFQ 633
+VA+REPGVDR+KIQSEI+QLQ QL S ++++SF+GENWL+VDS+ Y+ K IV SFTR + SVSV TI +++ +LFDAADQSG+LDS FTTTG GAVT +D MI+ VD QG+T +AS+LGA KR+ Q FVSNLMDAIDRGIG LVDADM+EESTRLQALQ QQQLGVQ+L+IAN +Q I++LF+
Sbjct: 95 LVASREPGVDRSKIQSEINQLQNQLVSISKSASFSGENWLSVDSSAATYTPMKHIVESFTRVNDGSVSVSTITVDINKTKLFDAADQSGLLDSVFTTTGGGAVTVSVSTLDVTAAGVDETDLDQMITFVDTVFQGMTKSASNLGAYTKRIDTQSSFVSNLMDAIDRGIGQLVDADMNEESTRLQALQVQQQLGVQALSIANANAQTIMSLFK 306
BLAST of mRNA_L-digitata_M_contig102347.2.1 vs. uniprot
Match: A0A2E0IK71_9HYPH (Flagellin n=2 Tax=Ahrensia sp. TaxID=1872419 RepID=A0A2E0IK71_9HYPH) HSP 1 Score: 224 bits (570), Expect = 1.050e-69 Identity = 144/212 (67.92%), Postives = 169/212 (79.72%), Query Frame = 1
Query: 1 IVAAREPGVDRAKIQSEIDQLQEQLFSNAEASSFTGENWLAVDSTLPDYSATKSIVSSFTRTST-SVSVETIDINVAGIELFDAADQSGILDSTFTTTGAGAVTXXXXXXXXXXXXXXXXXIDDMISNVDAKLQGLTTAASDLGAIKKRLSMQMDFVSNLMDAIDRGIGTLVDADMSEESTRLQALQTQQQLGVQSLAIANTTSQNILTLFQ 633
+VAAREPGVDR KIQSEI +LQ QL S AE++SF+GENWLAVDS DY+ATK++VSSF+R S SV+V TI I++ +EL+DA DQSGILDSTF XXXXXXXXXXXXXXX IDDMIS VD Q +TT AS+LGA K R+ MQ FV NLMDAIDRG+G LVDA+M EEST+LQALQTQQQLG+QSL+IAN+ +Q IL+LFQ
Sbjct: 95 LVAAREPGVDRTKIQSEIAELQNQLSSIAESASFSGENWLAVDSAAADYTATKNVVSSFSRASDGSVAVSTIAIDITTLELYDANDQSGILDSTFXXXXXXXXXXXXXXXXXXXXXXXXADIDDMISAVDGAFQQMTTVASNLGATKSRIDMQTSFVDNLMDAIDRGVGQLVDANMEEESTKLQALQTQQQLGIQSLSIANSNAQTILSLFQ 306
BLAST of mRNA_L-digitata_M_contig102347.2.1 vs. uniprot
Match: A0A2E2RWS0_9HYPH (Flagellin n=2 Tax=Ahrensia sp. TaxID=1872419 RepID=A0A2E2RWS0_9HYPH) HSP 1 Score: 223 bits (567), Expect = 2.990e-69 Identity = 139/212 (65.57%), Postives = 168/212 (79.25%), Query Frame = 1
Query: 1 IVAAREPGVDRAKIQSEIDQLQEQLFSNAEASSFTGENWLAVDSTLPDYSATKSIVSSFTRTST-SVSVETIDINVAGIELFDAADQSGILDSTFTTTGAGAVTXXXXXXXXXXXXXXXXXIDDMISNVDAKLQGLTTAASDLGAIKKRLSMQMDFVSNLMDAIDRGIGTLVDADMSEESTRLQALQTQQQLGVQSLAIANTTSQNILTLFQ 633
IVAA+EPG+DR+KIQSEI +LQ QL S A ++SF+GENWL+VDS+ Y+ATK++V+SFTR S SVSVET+ I++ ELFDA DQSGILDSTFTT G XXXXXXXXXXX +DDM+S VDA +T AAS LGA KR+ Q +FV LMDAI+RG+G LVDADM EESTRLQALQTQQQLG+Q+L+IANT++QNIL+LFQ
Sbjct: 95 IVAAKEPGIDRSKIQSEISELQNQLSSIATSASFSGENWLSVDSSDAAYTATKNVVASFTRASDGSVSVETLSIDITTTELFDANDQSGILDSTFTTGGXXXXXXXXXXXXXXXXNVDDTDLDDMLSAVDAAFGLMTDAASALGATSKRIDTQSEFVDTLMDAIERGVGQLVDADMEEESTRLQALQTQQQLGIQALSIANTSAQNILSLFQ 306 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102347.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig102347.2.1 >prot_L-digitata_M_contig102347.2.1 ID=prot_L-digitata_M_contig102347.2.1|Name=mRNA_L-digitata_M_contig102347.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=212bp IVAAREPGVDRAKIQSEIDQLQEQLFSNAEASSFTGENWLAVDSTLPDYSback to top mRNA from alignment at L-digitata_M_contig102347:278..913- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig102347.2.1 ID=mRNA_L-digitata_M_contig102347.2.1|Name=mRNA_L-digitata_M_contig102347.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=636bp|location=Sequence derived from alignment at L-digitata_M_contig102347:278..913- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig102347:278..913- >mRNA_L-digitata_M_contig102347.2.1 ID=mRNA_L-digitata_M_contig102347.2.1|Name=mRNA_L-digitata_M_contig102347.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=636bp|location=Sequence derived from alignment at L-digitata_M_contig102347:278..913- (Laminaria digitata LdigPH10_18mv male)back to top |