mRNA_L-digitata_M_contig102275.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig102275.2.1 vs. uniprot
Match: A0A2E8XTD0_9PROT (Peroxiredoxin n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XTD0_9PROT) HSP 1 Score: 249 bits (635), Expect = 1.670e-79 Identity = 118/142 (83.10%), Postives = 126/142 (88.73%), Query Frame = 1
Query: 1 KWLIEQFETRGNEPSGTLRMSEGKMVHDTSGQNKRRRDHHVVDKDLMEAIGSRIERRVLPEIQRAFHCPIRFVEEFKIVRYDADVGGFFRPHRDNTSVGTAHRRFAMTLNLNAEGHEGGDLRFPEYGYASYRPRTGEAAMFS 426
KWLI QFE RGNE SGTLRM EGKMVH T G+ KRRRDHHVVD DL+EAIGSRIERRVLPEIQ AFHCPIRFVEEFKI RYDADVGGFFRPHRDN+++GTAHRRFAMTLNLN E +EGG+LRFPEYG SY P TGEAA+FS
Sbjct: 176 KWLIAQFEERGNEASGTLRMREGKMVHITDGETKRRRDHHVVDADLLEAIGSRIERRVLPEIQLAFHCPIRFVEEFKIARYDADVGGFFRPHRDNSTIGTAHRRFAMTLNLNTEEYEGGELRFPEYGMTSYSPATGEAAIFS 317
BLAST of mRNA_L-digitata_M_contig102275.2.1 vs. uniprot
Match: A0A848WEC4_9PROT (Redoxin domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848WEC4_9PROT) HSP 1 Score: 223 bits (569), Expect = 1.680e-69 Identity = 109/159 (68.55%), Postives = 128/159 (80.50%), Query Frame = 1
Query: 4 WLIEQFETRGNEPSGTLRMSEGKMVHDTSGQNKRRRDHHVVDKDLMEAIGSRIERRVLPEIQRAFHCPIRFVEEFKIVRYDADVGGFFRPHRDNTSVGTAHRRFAMTLNLNAEGHEGGDLRFPEYGYASYRPRTGEAAMFS*C---HQGKPLCAALLHV 471
+LIEQFE RGNE SGTLRM+EGKMVH + K+RRDHHVVD+DL++ I I+RRVLPEI RAFHCPI+FVEEFKIVRYDAD GG+FRPHRDNTS GTAHRRFAMTLNLNAE ++GG+L FPEY A+Y+P TGEA +FS C H+ + A +V
Sbjct: 178 YLIEQFEKRGNEASGTLRMTEGKMVHASDSDVKQRRDHHVVDQDLLDEIAGYIQRRVLPEIHRAFHCPIKFVEEFKIVRYDADPGGYFRPHRDNTSPGTAHRRFAMTLNLNAEDYDGGELCFPEYNNATYKPATGEAVVFS-CNLLHEATDVTAGQRYV 335
BLAST of mRNA_L-digitata_M_contig102275.2.1 vs. uniprot
Match: A0A848Z2F5_9PROT (Redoxin domain-containing protein n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848Z2F5_9PROT) HSP 1 Score: 153 bits (386), Expect = 9.600e-42 Identity = 78/141 (55.32%), Postives = 95/141 (67.38%), Query Frame = 1
Query: 7 LIEQFETRGNEPSGTLRMSE-GKMVHDTSGQNKRRRDHHVVDKDLMEAIGSRIERRVLPEIQRAFHCPIRFVEEFKIVRYDADVGGFFRPHRDNTSVGTAHRRFAMTLNLNAEGHEGGDLRFPEYGYASYRPRTGEAAMFS 426
LI + RGN SGT+ M + G+ + KRRRDHHV D L I + RR+ PE++RAF + VEEFKIVRYDA+ GGFFRPHRDN+ A RRFAMTLNLN E +EGG+LRFPE+G YRP TG+A +FS
Sbjct: 202 LIAIWHERGNRESGTITMGKSGRQAKEIRHDVKRRRDHHVQDPALFAEISDTVFRRIQPEVERAFDTKLSRVEEFKIVRYDAEEGGFFRPHRDNSIPDKAQRRFAMTLNLNTEEYEGGELRFPEFGPNLYRPGTGDAVVFS 342
BLAST of mRNA_L-digitata_M_contig102275.2.1 vs. uniprot
Match: UPI001999C96F (2OG-Fe(II) oxygenase n=1 Tax=Sphingomonadaceae bacterium TaxID=1930536 RepID=UPI001999C96F) HSP 1 Score: 150 bits (378), Expect = 6.630e-41 Identity = 72/140 (51.43%), Postives = 96/140 (68.57%), Query Frame = 1
Query: 7 LIEQFETRGNEPSGTLRMSEGKMVHDTSGQNKRRRDHHVVDKDLMEAIGSRIERRVLPEIQRAFHCPIRFVEEFKIVRYDADVGGFFRPHRDNTSVGTAHRRFAMTLNLNAEGHEGGDLRFPEYGYASYRPRTGEAAMFS 426
L+E ++ G E SG +R +GK V +K+R D + D L + RIERR++PEI++AF P+ +E + + RYD D GG+FRPHRDNT+ GTAHRRFA T+NLNAE ++GGDLRFPEYG +YR TG A +FS
Sbjct: 173 LVELYDANGGEDSGFMREVDGKTVGLIDHSHKKRSDWVIDDDALRADLRRRIERRLVPEIRKAFQFPVSRMERYIVARYDGDTGGYFRPHRDNTTSGTAHRRFACTINLNAEEYDGGDLRFPEYGKRTYRAPTGGAVVFS 312
BLAST of mRNA_L-digitata_M_contig102275.2.1 vs. uniprot
Match: A0A328BBJ4_9CAUL (2OG-Fe(II) oxygenase n=1 Tax=Phenylobacterium kunshanense TaxID=1445034 RepID=A0A328BBJ4_9CAUL) HSP 1 Score: 149 bits (375), Expect = 1.730e-40 Identity = 72/140 (51.43%), Postives = 99/140 (70.71%), Query Frame = 1
Query: 7 LIEQFETRGNEPSGTLRMSEGKMVHDTSGQNKRRRDHHVVDKDLMEAIGSRIERRVLPEIQRAFHCPIRFVEEFKIVRYDADVGGFFRPHRDNTSVGTAHRRFAMTLNLNAEGHEGGDLRFPEYGYASYRPRTGEAAMFS 426
L++ +E G +PSGT+ +GK V S K RRD + D DL+ A +RI R+LPEI++AF ++E + + RYDA+ GG+F+PHRDNT+ GTAHR+FA+++NLNAE EGGDLRFPE+G +YRP TG A +FS
Sbjct: 170 LMDHYEQTGGQPSGTMIERDGKTVGVLS-DFKSRRDSTISDPDLVAACRARISHRLLPEIEKAFQFRATYIERYIVARYDAEDGGWFKPHRDNTTPGTAHRKFAVSINLNAEAFEGGDLRFPEFGSRTYRPPTGGAVVFS 308
BLAST of mRNA_L-digitata_M_contig102275.2.1 vs. uniprot
Match: A0A2D7ZNJ7_9CAUL (Peroxiredoxin n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A2D7ZNJ7_9CAUL) HSP 1 Score: 147 bits (371), Expect = 2.690e-40 Identity = 75/153 (49.02%), Postives = 102/153 (66.67%), Query Frame = 1
Query: 7 LIEQFETRGNEPSGTLRMSEGKMVHDTSGQNKRRRDHHVVDKDLMEAIGSRIERRVLPEIQRAFHCPIRFVEEFKIVRYDADVGGFFRPHRDNTSVGTAHRRFAMTLNLNAEGHEGGDLRFPEYGYASYRPRTGEAAMFS*C---HQGKPLCA 456
LI ++ G PSG +R GK V G KRRRD + D+ L+ I R+E R+LPEI++AF + +E + + Y++D GG+F+PHRDNT+ GTAHRRFA ++NLNAE HEGG+LRFPE+G +YRP TG A +FS C H+ P+ A
Sbjct: 122 LIAHYDRHGGAPSGVMREIGGKTVPVMDGM-KRRRDALIKDEALLGLIRKRLETRLLPEIRKAFQFQVSRIERYIVACYESDGGGYFKPHRDNTTKGTAHRRFACSINLNAEAHEGGELRFPEFGSKTYRPPTGGAVIFS-CSLLHEATPVTA 272
BLAST of mRNA_L-digitata_M_contig102275.2.1 vs. uniprot
Match: A0A4P6FX09_9SPHN (Redoxin domain-containing protein n=2 Tax=Sphingosinicella sp. BN140058 TaxID=1892855 RepID=A0A4P6FX09_9SPHN) HSP 1 Score: 148 bits (373), Expect = 3.350e-40 Identity = 76/153 (49.67%), Postives = 101/153 (66.01%), Query Frame = 1
Query: 1 KWLIEQFETRGNEPSGTLRMSEGKMVHDTSGQNKRRRDHHVVDKDLMEAIGSRIERRVLPEIQRAFHCPIRFVEEFKIVRYDADVGGFFRPHRDNTSVGTAHRRFAMTLNLNAEGHEGGDLRFPEYGYASYRPRTGEAAMFS*C---HQGKPL 450
++LI +E G E SG +R +GK V T Q+KRRRD+ + D+ L + RI RR++P I RAF +E + + YDA+ GG FR HRDNT+ GTAHRRFA+T+NLNAE +EGG+LRFPEYG +YR TG A +FS C H+ P+
Sbjct: 168 RYLISLYEKEGGEESGFMREVDGKTVLVTDPQHKRRRDYTIADQQLQGQLALRIRRRLVPMIARAFQFEATRMERYIVACYDAEAGGHFRAHRDNTTKGTAHRRFAVTINLNAEEYEGGELRFPEYGRRTYRAPTGGAVVFS-CSLLHEATPV 319
BLAST of mRNA_L-digitata_M_contig102275.2.1 vs. uniprot
Match: W0AFH1_9SPHN (Fe2OG dioxygenase domain-containing protein n=1 Tax=Sphingomonas sanxanigenens DSM 19645 = NX02 TaxID=1123269 RepID=W0AFH1_9SPHN) HSP 1 Score: 147 bits (372), Expect = 6.610e-40 Identity = 75/151 (49.67%), Postives = 100/151 (66.23%), Query Frame = 1
Query: 7 LIEQFETRGNEPSGTLRMSEGKMVHDTSGQNKRRRDHHVVDKDLMEAIGSRIERRVLPEIQRAFHCPIRFVEEFKIVRYDADVGGFFRPHRDNTSVGTAHRRFAMTLNLNAEGHEGGDLRFPEYGYASYRPRTGEAAMFS*C---HQGKPL 450
LI+ ++ G SG +R +G V +KRR D +VD+DL + I RI R ++P IQRAF + +E + + YD+ VGG+FRPHRDNT+ GTAHRRFA T+NLNAE +EGG+LRFPE+G ASYR TG A +FS C H+ P+
Sbjct: 176 LIQLYDAGGGTESGFMREEDGMTVLRRDYTHKRRSDFEIVDEDLRKTINRRIIRTLVPAIQRAFQFHVTRIERWTVACYDSSVGGYFRPHRDNTTKGTAHRRFACTINLNAEEYEGGELRFPEFGRASYRAETGGAVVFS-CSLLHEATPV 325
BLAST of mRNA_L-digitata_M_contig102275.2.1 vs. uniprot
Match: A8TIV2_9PROT (Fe2OG dioxygenase domain-containing protein n=1 Tax=alpha proteobacterium BAL199 TaxID=331869 RepID=A8TIV2_9PROT) HSP 1 Score: 145 bits (367), Expect = 1.750e-39 Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 1
Query: 1 KWLIEQFETRGNEPSGTLRMSEGKMVHDTSGQNKRRRDHHVVDKDLMEA-IGSRIERRVLPEIQRAFHCPIRFVEEFKIVRYDADVGGFFRPHRDNTSVGTAHRRFAMTLNLNAEGHEGGDLRFPEYGYASYRPRTGEAAMFS*C---HQGKPLCAALLHV 471
+WLI +++GNEPSG L+ +G+ V + + K RRDH V + +EA I +RR++PEI RA H PI+ E FKIVRY+A+ GG FRPHRDNTS RRFA+TLNLN ++GG L FPEYG YRP GEA +FS C H+ +P+ +V
Sbjct: 173 RWLIHVHDSQGNEPSGFLQQVKGESVLLSDAEVKVRRDHVVPEGSPLEAEIRHIFQRRLIPEIARATHSPIQRHELFKIVRYEAEEGGHFRPHRDNTSTAGRTRRFAVTLNLNTGAYDGGHLVFPEYGDIGYRPAAGEAVVFS-CSLLHEARPVTRGTRYV 332
BLAST of mRNA_L-digitata_M_contig102275.2.1 vs. uniprot
Match: A0A328APE1_9CAUL (2OG-Fe(II) oxygenase n=1 Tax=Phenylobacterium deserti TaxID=1914756 RepID=A0A328APE1_9CAUL) HSP 1 Score: 145 bits (366), Expect = 3.650e-39 Identity = 76/158 (48.10%), Postives = 102/158 (64.56%), Query Frame = 1
Query: 7 LIEQFETRGNEPSGTLRMSEGKMVHDTSGQNKRRRDHHVVDKDLMEAIGSRIERRVLPEIQRAFHCPIRFVEEFKIVRYDADVGGFFRPHRDNTSVGTAHRRFAMTLNLNAEGHEGGDLRFPEYGYASYRPRTGEAAMFS*C---HQGKPLCAALLHV 471
LI+ ++ G E SGT+R G+ V S K RRD + D L +A+ +RI RR+LPEI +AF +E + + YDA GGFFRPHRDNT+ GTAHR+FA+++NLN+E EGGDLRFPEYG +YRP TG A +FS C H+ P+ + +
Sbjct: 170 LIDLYQAHGGEQSGTMRTINGRTVGVLSNM-KDRRDAPIEDPALQDALRARITRRLLPEIAKAFCYKATRIERYIVACYDASSGGFFRPHRDNTTAGTAHRQFAVSINLNSEEFEGGDLRFPEYGTRTYRPPTGGAVVFS-CSLLHEATPVTKGVRYA 325 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102275.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig102275.2.1 >prot_L-digitata_M_contig102275.2.1 ID=prot_L-digitata_M_contig102275.2.1|Name=mRNA_L-digitata_M_contig102275.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=124bp MSEGKMVHDTSGQNKRRRDHHVVDKDLMEAIGSRIERRVLPEIQRAFHCPback to top mRNA from alignment at L-digitata_M_contig102275:395..914- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig102275.2.1 ID=mRNA_L-digitata_M_contig102275.2.1|Name=mRNA_L-digitata_M_contig102275.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=520bp|location=Sequence derived from alignment at L-digitata_M_contig102275:395..914- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig102275:395..914- >mRNA_L-digitata_M_contig102275.2.1 ID=mRNA_L-digitata_M_contig102275.2.1|Name=mRNA_L-digitata_M_contig102275.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=372bp|location=Sequence derived from alignment at L-digitata_M_contig102275:395..914- (Laminaria digitata LdigPH10_18mv male)back to top |