mRNA_L-digitata_M_contig10193.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
|
Overview
Homology
BLAST of mRNA_L-digitata_M_contig10193.2.1 vs. uniprot
Match: A0A6H5JTL5_9PHAE (5-hydroxyisourate hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL5_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 3.410e-13 Identity = 38/56 (67.86%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 1 PITSHALDTATGKPARGLPLKLEQL--GGAVGEGWLALGATATDEDGRAPGLLVPG 162
PIT+HALDT+TGKPA GLPLKLEQ GG G WL LG+ T+EDGRAP LL G
Sbjct: 38 PITAHALDTSTGKPACGLPLKLEQKSGGGRGGGYWLLLGSCETNEDGRAPRLLDAG 93
BLAST of mRNA_L-digitata_M_contig10193.2.1 vs. uniprot
Match: A0A6I9JBB7_CHRAS (5-hydroxyisourate hydrolase n=1 Tax=Chrysochloris asiatica TaxID=185453 RepID=A0A6I9JBB7_CHRAS) HSP 1 Score: 60.1 bits (144), Expect = 7.280e-10 Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 1 PITSHALDTATGKPARGLPLKLEQLGGAVGEGWLALGATATDEDGRAPGLLVPGTVS 171
P+T+H LDTA+GKPA+GL L L +L G G+ W+ L + TD DGR PGLL PG ++
Sbjct: 29 PLTTHVLDTASGKPAQGLHLCLYRLEGP-GQQWMELRKSYTDADGRCPGLLEPGQMN 84
BLAST of mRNA_L-digitata_M_contig10193.2.1 vs. uniprot
Match: A0A5N8VZZ0_9ACTN (5-hydroxyisourate hydrolase n=4 Tax=Streptomyces TaxID=1883 RepID=A0A5N8VZZ0_9ACTN) HSP 1 Score: 56.6 bits (135), Expect = 9.930e-9 Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 1
Query: 4 ITSHALDTATGKPARGLPLKLEQLGGAVGEGWLALGATATDEDGRAPGLLVP--GTVSVVLHCQ 189
+++H LDT+ G+PA+G+P+ L G GW ALGA+ATD DGR L P GT V L +
Sbjct: 6 VSTHILDTSIGRPAQGVPVSLSARGAGTEAGWTALGASATDADGRCKDLPPPPRGTTHVRLRFE 69
BLAST of mRNA_L-digitata_M_contig10193.2.1 vs. uniprot
Match: A0A5P9QDM1_9MICO (Hydroxyisourate hydrolase n=1 Tax=Luteimicrobium xylanilyticum TaxID=1133546 RepID=A0A5P9QDM1_9MICO) HSP 1 Score: 58.2 bits (139), Expect = 2.330e-8 Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 4 ITSHALDTATGKPARGLPLKLEQLGGAVGEGWLALGATATDEDGRA----PGLLVPG 162
+T+H LDTA G+PA G+P++LE LGG +GW +G TD+DGR PG L PG
Sbjct: 211 VTTHVLDTAAGRPAAGVPVRLEALGG---DGWHEVGTGITDDDGRVRNLGPGTLAPG 264
BLAST of mRNA_L-digitata_M_contig10193.2.1 vs. uniprot
Match: A0A356TSG1_9DELT (5-hydroxyisourate hydrolase n=2 Tax=Myxococcales TaxID=29 RepID=A0A356TSG1_9DELT) HSP 1 Score: 55.5 bits (132), Expect = 2.580e-8 Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 1 PITSHALDTATGKPARGLPLKLEQLGGAVGEGWLALGATATDEDGRAPGLLVPGTV 168
PIT+H LDTA+G+PARG+P+ LE+ G+ + +G+ TD+DGR L+ PGT+
Sbjct: 5 PITTHVLDTASGRPARGVPVTLER---KDGDAFREVGSGETDDDGRITDLMEPGTL 57
BLAST of mRNA_L-digitata_M_contig10193.2.1 vs. uniprot
Match: UPI00054B2033 (hydroxyisourate hydrolase n=1 Tax=Streptacidiphilus albus TaxID=105425 RepID=UPI00054B2033) HSP 1 Score: 55.1 bits (131), Expect = 3.130e-8 Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 4 ITSHALDTATGKPARGLPLKLEQLGGAVGEGWLALGATATDEDGRAPGLLVP 159
I++H LDT+TG+PA G+P++L Q A G W LGA+ATD DGR L VP
Sbjct: 4 ISTHVLDTSTGRPAEGVPVELAQRTEAAG--WTVLGASATDADGRCKDLPVP 53
BLAST of mRNA_L-digitata_M_contig10193.2.1 vs. uniprot
Match: UPI0019844DE4 (Hydroxyisourate hydrolase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI0019844DE4) HSP 1 Score: 54.7 bits (130), Expect = 5.160e-8 Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 1
Query: 1 PITSHALDTATGKPARGLPLKLEQLGGAVGEGWLALGATATDEDGRAPGLLVPGTVSVVLH 183
P+T+H LDT+TG+PARG+ ++LE V GW L TD+DGR GLL G + ++
Sbjct: 3 PLTTHVLDTSTGRPARGVEVRLEL---QVPGGWHELARARTDDDGRVRGLLEAGALETAVY 60
BLAST of mRNA_L-digitata_M_contig10193.2.1 vs. uniprot
Match: A0A2X0IF90_9ACTN (5-hydroxyisourate hydrolase n=7 Tax=Streptacidiphilus TaxID=228398 RepID=A0A2X0IF90_9ACTN) HSP 1 Score: 53.9 bits (128), Expect = 8.690e-8 Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 4 ITSHALDTATGKPARGLPLKLEQLGGAVGEGWLALGATATDEDGRAPGLLVPG-TVSVVLHCQ 189
I++H LDT+ GKPA G+P++L Q GE W ALGA+ATD DGR L VP +V VL +
Sbjct: 4 ISTHVLDTSLGKPAAGIPVELAQQ--VAGE-WKALGASATDADGRCKDLPVPDLSVGTVLRLR 63
BLAST of mRNA_L-digitata_M_contig10193.2.1 vs. uniprot
Match: A0A5N0UN16_9PSEU (5-hydroxyisourate hydrolase n=1 Tax=Amycolatopsis acidicola TaxID=2596893 RepID=A0A5N0UN16_9PSEU) HSP 1 Score: 53.5 bits (127), Expect = 1.230e-7 Identity = 30/66 (45.45%), Postives = 37/66 (56.06%), Query Frame = 1
Query: 4 ITSHALDTATGKPARGLPLKLEQLGGAVGEGWLALGATATDEDGRA----PGLLVPGTVSVVLHCQ 189
+T+H LDTA GKPARG+P++LE G V EG TDEDGR P L PG +V +
Sbjct: 4 VTTHVLDTAAGKPARGVPVRLESAAGPVAEG-------VTDEDGRVRELGPERLEPGVYRLVFDTE 62
BLAST of mRNA_L-digitata_M_contig10193.2.1 vs. uniprot
Match: A0A7J8FNN5_ROUAE (TR_THY domain-containing protein n=2 Tax=Rousettus aegyptiacus TaxID=9407 RepID=A0A7J8FNN5_ROUAE) HSP 1 Score: 53.1 bits (126), Expect = 1.520e-7 Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 1 PITSHALDTATGKPARGLPLKLEQLGGAVGEGWLALGATATDEDGRAPGLLVPG 162
P+T+HALDTA+G P +GL L+L +L G+ W L + TD DGR PGLL G
Sbjct: 7 PLTTHALDTASGLPTQGLGLRLSRLEDH-GQQWTKLRTSYTDHDGRCPGLLPAG 59 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10193.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig10193.2.1 >prot_L-digitata_M_contig10193.2.1 ID=prot_L-digitata_M_contig10193.2.1|Name=mRNA_L-digitata_M_contig10193.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=64bp PITSHALDTATGKPARGLPLKLEQLGGAVGEGWLALGATATDEDGRAPGLback to top mRNA from alignment at L-digitata_M_contig10193:7598..7789+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig10193.2.1 ID=mRNA_L-digitata_M_contig10193.2.1|Name=mRNA_L-digitata_M_contig10193.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=192bp|location=Sequence derived from alignment at L-digitata_M_contig10193:7598..7789+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig10193:7598..7789+ >mRNA_L-digitata_M_contig10193.2.1 ID=mRNA_L-digitata_M_contig10193.2.1|Name=mRNA_L-digitata_M_contig10193.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=192bp|location=Sequence derived from alignment at L-digitata_M_contig10193:7598..7789+ (Laminaria digitata LdigPH10_18mv male)back to top |