prot_L-digitata_M_contig99970.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99970.1.1
Unique Nameprot_L-digitata_M_contig99970.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length152
Homology
BLAST of mRNA_L-digitata_M_contig99970.1.1 vs. uniprot
Match: A0A3C1KRN0_9GAMM (DsbE family thiol:disulfide interchange protein n=5 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KRN0_9GAMM)

HSP 1 Score: 317 bits (813), Expect = 1.790e-109
Identity = 148/151 (98.01%), Postives = 150/151 (99.34%), Query Frame = 0
Query:    1 MELPSALIDKPLPAFSLTALADGRVLTRDDVIGDPALFNVWATWCISCRAEHPYLQRLADTGIPIYGINYKDEDQAARRWLQELGDPYRANIVDREGSLGVDLGVYGAPETYLVDADGVIRYRHVGVVDDRVWRDTLEPLWREVLAMAQEP 151
            MELPSALIDKPLPAFSLTALADGR LTRDDVIG+PALFNVWATWCISCRAEHPYLQRLADTGIPIYGINYKDEDQAARRWLQELGDPYRANIVDREGSLGVDLGVYGAPETYLVDADGVIRYRHVGV+DDRVWRDTLEPLWREVLAMAQEP
Sbjct:   30 MELPSALIDKPLPAFSLTALADGRALTRDDVIGEPALFNVWATWCISCRAEHPYLQRLADTGIPIYGINYKDEDQAARRWLQELGDPYRANIVDREGSLGVDLGVYGAPETYLVDADGVIRYRHVGVIDDRVWRDTLEPLWREVLAMAQEP 180          
BLAST of mRNA_L-digitata_M_contig99970.1.1 vs. uniprot
Match: A0A2N5Y4E2_9GAMM (DsbE family thiol:disulfide interchange protein n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y4E2_9GAMM)

HSP 1 Score: 280 bits (716), Expect = 1.100e-94
Identity = 124/151 (82.12%), Postives = 139/151 (92.05%), Query Frame = 0
Query:    1 MELPSALIDKPLPAFSLTALADGRVLTRDDVIGDPALFNVWATWCISCRAEHPYLQRLADTGIPIYGINYKDEDQAARRWLQELGDPYRANIVDREGSLGVDLGVYGAPETYLVDADGVIRYRHVGVVDDRVWRDTLEPLWREVLAMAQEP 151
            M +PSALID+PLP F LT LAD R L RDDVIG+PALFNVWATWCISCR EHPYLQ+LAD+G+PIYGINYKDED+AARRWLQ+LG+PYRANIVDREG+LGVDLGVYGAPETYLVDADG+IRYRHVGV+D+RVWRDTLEPLWRE+ A+   P
Sbjct:   30 MAMPSALIDRPLPEFRLTELADNRPLERDDVIGEPALFNVWATWCISCRVEHPYLQQLADSGVPIYGINYKDEDEAARRWLQDLGNPYRANIVDREGTLGVDLGVYGAPETYLVDADGIIRYRHVGVIDERVWRDTLEPLWREIAALESTP 180          
BLAST of mRNA_L-digitata_M_contig99970.1.1 vs. uniprot
Match: A0A6C0U212_9GAMM (DsbE family thiol:disulfide interchange protein n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0U212_9GAMM)

HSP 1 Score: 261 bits (667), Expect = 3.220e-87
Identity = 117/151 (77.48%), Postives = 134/151 (88.74%), Query Frame = 0
Query:    1 MELPSALIDKPLPAFSLTALADGRVLTRDDVIGDPALFNVWATWCISCRAEHPYLQRLADTGIPIYGINYKDEDQAARRWLQELGDPYRANIVDREGSLGVDLGVYGAPETYLVDADGVIRYRHVGVVDDRVWRDTLEPLWREVLAMAQEP 151
            M +PSALID+PLP+F+LT L+D R L R DV+G+ ALFNVWATWCISCR EHPYLQ+LAD+GIPIYGINYKD+  AARRWL ELGDPYRANIVDREGSLGVDLGVYGAPETYLVDA+GVIRYRHVGV+D+RVW+ TLEPLWR++    + P
Sbjct:   30 MAMPSALIDRPLPSFTLTELSDERPLVRADVVGEAALFNVWATWCISCRVEHPYLQQLADSGIPIYGINYKDDSAAARRWLAELGDPYRANIVDREGSLGVDLGVYGAPETYLVDAEGVIRYRHVGVIDERVWQGTLEPLWRQITRGEEVP 180          
BLAST of mRNA_L-digitata_M_contig99970.1.1 vs. uniprot
Match: A0A2D5FAL5_9GAMM (DsbE family thiol:disulfide interchange protein n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5FAL5_9GAMM)

HSP 1 Score: 254 bits (648), Expect = 2.440e-84
Identity = 115/145 (79.31%), Postives = 126/145 (86.90%), Query Frame = 0
Query:    2 ELPSALIDKPLPAFSLTALADGRVLTRDDVIGDPALFNVWATWCISCRAEHPYLQRLADTGIPIYGINYKDEDQAARRWLQELGDPYRANIVDREGSLGVDLGVYGAPETYLVDADGVIRYRHVGVVDDRVWRDTLEPLWREVLA 146
            ELPSALIDKP PAF L AL DGR LTR+ V G  ALFNVWATWCISCR EHPYL++LA  GIPIYG+NYKD D+AARRWL +LGDPY  NIVDREG+LG+DLGVYGAPETYLVDA GVIRYRHVGV+D+RVWR TLEPLWRE+ A
Sbjct:   31 ELPSALIDKPFPAFRLAALEDGRELTRESVTGRAALFNVWATWCISCRVEHPYLEQLAGEGIPIYGVNYKDNDEAARRWLADLGDPYVLNIVDREGTLGLDLGVYGAPETYLVDAAGVIRYRHVGVIDERVWRSTLEPLWREITA 175          
BLAST of mRNA_L-digitata_M_contig99970.1.1 vs. uniprot
Match: A0A4V2SC30_9GAMM (Cytochrome c biogenesis protein CcmG/thiol:disulfide interchange protein DsbE n=1 Tax=Chromatocurvus halotolerans TaxID=1132028 RepID=A0A4V2SC30_9GAMM)

HSP 1 Score: 234 bits (596), Expect = 2.030e-76
Identity = 100/143 (69.93%), Postives = 125/143 (87.41%), Query Frame = 0
Query:    2 ELPSALIDKPLPAFSLTALADGRVLTRDDVIGDPALFNVWATWCISCRAEHPYLQRLADTGIPIYGINYKDEDQAARRWLQELGDPYRANIVDREGSLGVDLGVYGAPETYLVDADGVIRYRHVGVVDDRVWRDTLEPLWREV 144
            ELPSALI++PLP FSL AL + R L   DV G+PALFNVWATWC++CR EHPYLQ+LA+ G+ IYGINYKD+  AA++WL++LGDPYR NIVDREG+LG+DLGVYGAPETY VDA+GV+RYRHVGV+D+R+W+  LEP++RE+
Sbjct:   31 ELPSALINRPLPTFSLPALGEERTLRPADVTGEPALFNVWATWCVACRVEHPYLQQLAEEGVAIYGINYKDDSAAAQQWLRDLGDPYRVNIVDREGTLGLDLGVYGAPETYFVDAEGVVRYRHVGVIDERLWKGRLEPIYREM 173          
BLAST of mRNA_L-digitata_M_contig99970.1.1 vs. uniprot
Match: A0A2E0YV68_9GAMM (DsbE family thiol:disulfide interchange protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0YV68_9GAMM)

HSP 1 Score: 234 bits (596), Expect = 2.100e-76
Identity = 105/150 (70.00%), Postives = 123/150 (82.00%), Query Frame = 0
Query:    2 ELPSALIDKPLPAFSLTALADGRVLTRDDVIGDPALFNVWATWCISCRAEHPYLQRLADTGIPIYGINYKDEDQAARRWLQELGDPYRANIVDREGSLGVDLGVYGAPETYLVDADGVIRYRHVGVVDDRVWRDTLEPLWREVLAMAQEP 151
            E+PSALID+PLPAFSL  L     +T+ DV+G  +L NVWATWC+SCR EHPYLQ+LAD G+PI G+NYKDED AA  WL ELGDPYR NI DR+GSLG+DLGVYGAPETYL+DA GVIRYRHVGVVD+RVW+  L+PL+RE+LA    P
Sbjct:   31 EMPSALIDRPLPAFSLPRLDGEGEVTQSDVVGQVSLLNVWATWCVSCRVEHPYLQQLADAGVPIIGLNYKDEDAAALDWLGELGDPYRVNIADRQGSLGLDLGVYGAPETYLLDAQGVIRYRHVGVVDERVWQGVLQPLYRELLAAGGAP 180          
BLAST of mRNA_L-digitata_M_contig99970.1.1 vs. uniprot
Match: UPI0019D3933D (DsbE family thiol:disulfide interchange protein n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3933D)

HSP 1 Score: 234 bits (596), Expect = 2.930e-76
Identity = 108/143 (75.52%), Postives = 121/143 (84.62%), Query Frame = 0
Query:    2 ELPSALIDKPLPAFSLTALADGRVLTRDDVIGDPALFNVWATWCISCRAEHPYLQRLADTGIPIYGINYKDEDQAARRWLQELGDPYRANIVDREGSLGVDLGVYGAPETYLVDADGVIRYRHVGVVDDRVWRDTLEPLWREV 144
            ELPSAL+DKP PAFSL +LA G  L RD   G+ +L NVWATWCISCR EHPYLQ+LAD G+ I G+NYKD+ +AARRWL ELGDPYRANIVD  G+LGVDLGVYGAPETYLVDA+GVIRYRHVGVVD+RVW  TL PL+REV
Sbjct:   31 ELPSALVDKPFPAFSLPSLAGGEDLDRDLFSGEVSLVNVWATWCISCRVEHPYLQKLADAGVRIIGVNYKDDPEAARRWLAELGDPYRANIVDGAGNLGVDLGVYGAPETYLVDAEGVIRYRHVGVVDERVWTRTLAPLYREV 173          
BLAST of mRNA_L-digitata_M_contig99970.1.1 vs. uniprot
Match: A0A661H9T6_9GAMM (DsbE family thiol:disulfide interchange protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A661H9T6_9GAMM)

HSP 1 Score: 230 bits (587), Expect = 4.920e-75
Identity = 105/147 (71.43%), Postives = 121/147 (82.31%), Query Frame = 0
Query:    2 ELPSALIDKPLPAFSLTALADGRVLTRDDVIGDPALFNVWATWCISCRAEHPYLQRLADTGIPIYGINYKDEDQAARRWLQELGDPYRANIVDREGSLGVDLGVYGAPETYLVDADGVIRYRHVGVVDDRVWRDTLEPLWREVLAMA 148
            E+PSALID PLP F+L +L   R+++R+DV+G   L NVWATWC+SCR EHPYLQ LAD G PIYG+NYKD+D  A RWL ELG+PY ANI DREG+LG+DLGVYGAPETYLVDA GVIRYRHVGVVDDRVWR  LEPL+ E+ A A
Sbjct:   31 EMPSALIDNPLPEFTLPSLGQDRLISRNDVVGRVVLLNVWATWCVSCRVEHPYLQVLADRGTPIYGVNYKDDDADALRWLAELGNPYVANIADREGTLGLDLGVYGAPETYLVDAAGVIRYRHVGVVDDRVWRTILEPLYMELNAGA 177          
BLAST of mRNA_L-digitata_M_contig99970.1.1 vs. uniprot
Match: A0A095WXQ6_9GAMM (Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase n=1 Tax=Pseudohaliea rubra DSM 19751 TaxID=1265313 RepID=A0A095WXQ6_9GAMM)

HSP 1 Score: 229 bits (585), Expect = 9.930e-75
Identity = 102/143 (71.33%), Postives = 120/143 (83.92%), Query Frame = 0
Query:    2 ELPSALIDKPLPAFSLTALADGRVLTRDDVIGDPALFNVWATWCISCRAEHPYLQRLADTGIPIYGINYKDEDQAARRWLQELGDPYRANIVDREGSLGVDLGVYGAPETYLVDADGVIRYRHVGVVDDRVWRDTLEPLWREV 144
            ELPSALID+PLP FSL AL  G +LT   V G+ ALFNVWATWCI+CR EHPYL++LA  G+PIYGINYKD+  AARRWL ELG+PYRANIVD EG+LG+DLGVYGAPETYLVD  G++RYRHVG V+DR+W  TL PL+R++
Sbjct:   31 ELPSALIDRPLPNFSLPALESGDMLTNATVTGEVALFNVWATWCITCRVEHPYLEKLAAAGVPIYGINYKDDSSAARRWLAELGNPYRANIVDAEGTLGLDLGVYGAPETYLVDGAGIVRYRHVGEVNDRIWESTLGPLYRQL 173          
BLAST of mRNA_L-digitata_M_contig99970.1.1 vs. uniprot
Match: A0A5B0WMF0_9GAMM (DsbE family thiol:disulfide interchange protein n=1 Tax=Pseudohalioglobus sp. NY5 TaxID=2606449 RepID=A0A5B0WMF0_9GAMM)

HSP 1 Score: 227 bits (579), Expect = 7.870e-74
Identity = 102/140 (72.86%), Postives = 115/140 (82.14%), Query Frame = 0
Query:    2 ELPSALIDKPLPAFSLTALADGRVLTRDDVIGDPALFNVWATWCISCRAEHPYLQRLADTGIPIYGINYKDEDQAARRWLQELGDPYRANIVDREGSLGVDLGVYGAPETYLVDADGVIRYRHVGVVDDRVWRDTLEPLW 141
            ELPSALIDKP PAF+L AL     L R  V G+ ALFNVWATWC+SCR EHPYL  LA  G+ IYGINYKDED AA RWLQ+LGDPY ANI DREG+LG+DLGVYGAPETYLVDA+GV+RYRHVGVVD+RVW   L+P++
Sbjct:   31 ELPSALIDKPFPAFTLPALGSDETLDRQAVTGEVALFNVWATWCVSCRVEHPYLTELAQQGVAIYGINYKDEDAAALRWLQQLGDPYIANIADREGTLGLDLGVYGAPETYLVDAEGVVRYRHVGVVDERVWTTVLQPIY 170          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99970.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C1KRN0_9GAMM1.790e-10998.01DsbE family thiol:disulfide interchange protein n=... [more]
A0A2N5Y4E2_9GAMM1.100e-9482.12DsbE family thiol:disulfide interchange protein n=... [more]
A0A6C0U212_9GAMM3.220e-8777.48DsbE family thiol:disulfide interchange protein n=... [more]
A0A2D5FAL5_9GAMM2.440e-8479.31DsbE family thiol:disulfide interchange protein n=... [more]
A0A4V2SC30_9GAMM2.030e-7669.93Cytochrome c biogenesis protein CcmG/thiol:disulfi... [more]
A0A2E0YV68_9GAMM2.100e-7670.00DsbE family thiol:disulfide interchange protein n=... [more]
UPI0019D3933D2.930e-7675.52DsbE family thiol:disulfide interchange protein n=... [more]
A0A661H9T6_9GAMM4.920e-7571.43DsbE family thiol:disulfide interchange protein n=... [more]
A0A095WXQ6_9GAMM9.930e-7571.33Cytochrome c-type biogenesis protein CcmG/DsbE, th... [more]
A0A5B0WMF0_9GAMM7.870e-7472.86DsbE family thiol:disulfide interchange protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..149
e-value: 1.8E-39
score: 136.9
NoneNo IPR availablePIRSRPIRSR000077-4PIRSR000077-4coord: 35..60
e-value: 0.0032
score: 15.4
NoneNo IPR availablePANTHERPTHR42852THIOL:DISULFIDE INTERCHANGE PROTEIN DSBEcoord: 4..143
IPR013740RedoxinPFAMPF08534Redoxincoord: 10..129
e-value: 4.6E-16
score: 58.9
IPR004799Periplasmic protein thiol:disulphide oxidoreductase DsbETIGRFAMTIGR00385TIGR00385coord: 2..141
e-value: 7.1E-57
score: 189.7
IPR004799Periplasmic protein thiol:disulphide oxidoreductase DsbECDDcd03010TlpA_like_DsbEcoord: 10..134
e-value: 6.47436E-65
score: 192.407
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 6..150
score: 14.917579
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 13..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99970contigL-digitata_M_contig99970:387..842 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99970.1.1mRNA_L-digitata_M_contig99970.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99970 1..929 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99970.1.1 ID=prot_L-digitata_M_contig99970.1.1|Name=mRNA_L-digitata_M_contig99970.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=152bp
MELPSALIDKPLPAFSLTALADGRVLTRDDVIGDPALFNVWATWCISCRA
EHPYLQRLADTGIPIYGINYKDEDQAARRWLQELGDPYRANIVDREGSLG
VDLGVYGAPETYLVDADGVIRYRHVGVVDDRVWRDTLEPLWREVLAMAQE
P*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013740Redoxin
IPR004799Periplasmic_diS_OxRdtase_DsbE
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf