prot_L-digitata_M_contig99926.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99926.1.1
Unique Nameprot_L-digitata_M_contig99926.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length53
Homology
BLAST of mRNA_L-digitata_M_contig99926.1.1 vs. uniprot
Match: D7G8D5_ECTSI (Grx_S14-glutaredoxin subgroup II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D5_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.620e-24
Identity = 43/49 (87.76%), Postives = 47/49 (95.92%), Query Frame = 0
Query:    4 QEYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKSLEDAGCKFVSSE 52
            +E+SSWPTIPQLY+DGEFTGGADIMIESFQSGELKK+LEDAGC FV SE
Sbjct:   57 KEFSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGCTFVPSE 105          
BLAST of mRNA_L-digitata_M_contig99926.1.1 vs. uniprot
Match: A0A6H5KLX0_9PHAE (Glutaredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX0_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.040e-24
Identity = 45/49 (91.84%), Postives = 47/49 (95.92%), Query Frame = 0
Query:    4 QEYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKSLEDAGCKFVSSE 52
            +EYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKK+LEDAGC FV SE
Sbjct:  131 KEYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKTLEDAGCTFVPSE 179          
BLAST of mRNA_L-digitata_M_contig99926.1.1 vs. uniprot
Match: A0A835Z4Q0_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q0_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.640e-15
Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    4 QEYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKSLEDAGCKFV 49
            +EYS WPTIPQLYV GEF GG+DI+IE FQ+GELK +LE  G +FV
Sbjct:  121 KEYSQWPTIPQLYVGGEFVGGSDILIELFQNGELKTTLESGGAEFV 166          
BLAST of mRNA_L-digitata_M_contig99926.1.1 vs. uniprot
Match: A0A7S3I3U2_9SPIT (Glutaredoxin n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3I3U2_9SPIT)

HSP 1 Score: 72.4 bits (176), Expect = 3.220e-15
Identity = 29/44 (65.91%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    4 QEYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKSLEDAGCK 47
            +E+S+WPTIPQLY+DGEF GG D  +E ++SGEL+K+LEDAG K
Sbjct:   61 KEFSNWPTIPQLYIDGEFLGGCDTTVEMYKSGELRKALEDAGIK 104          
BLAST of mRNA_L-digitata_M_contig99926.1.1 vs. uniprot
Match: A0A4Y6KPC8_9RHOO (Glutaredoxin n=2 Tax=Azoarcus TaxID=12960 RepID=A0A4Y6KPC8_9RHOO)

HSP 1 Score: 70.5 bits (171), Expect = 1.990e-14
Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 QTRQ---EYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKSLEDAG 45
            Q RQ   E+SSWPTIPQLYV+GEF GGADIM E +QSGE+++ L+DAG
Sbjct:   57 QVRQGIKEFSSWPTIPQLYVNGEFVGGADIMREMYQSGEMQQLLKDAG 104          
BLAST of mRNA_L-digitata_M_contig99926.1.1 vs. uniprot
Match: A0A0B9A8H8_9SPHN (Glutaredoxin n=3 Tax=Novosphingobium TaxID=165696 RepID=A0A0B9A8H8_9SPHN)

HSP 1 Score: 70.1 bits (170), Expect = 2.620e-14
Identity = 29/44 (65.91%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    4 QEYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKSLEDAGCK 47
            + YS WPTIPQLYV GEF GG+DIM+E FQ+GEL++ +ED+G K
Sbjct:   62 KSYSDWPTIPQLYVKGEFVGGSDIMMEMFQAGELQQLMEDSGVK 105          
BLAST of mRNA_L-digitata_M_contig99926.1.1 vs. uniprot
Match: A0A0N1BJF0_9PROT (Glutaredoxin n=1 Tax=alpha proteobacterium AAP81b TaxID=1523432 RepID=A0A0N1BJF0_9PROT)

HSP 1 Score: 70.1 bits (170), Expect = 2.890e-14
Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    6 YSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKSLEDAG 45
            YS WPTIPQLYVDGEF GG+DIMIE +QSGEL   L DAG
Sbjct:   66 YSDWPTIPQLYVDGEFVGGSDIMIEMYQSGELAALLADAG 105          
BLAST of mRNA_L-digitata_M_contig99926.1.1 vs. uniprot
Match: Q0AHT9_NITEC (Glutaredoxin n=4 Tax=Nitrosomonas TaxID=914 RepID=Q0AHT9_NITEC)

HSP 1 Score: 69.7 bits (169), Expect = 3.280e-14
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    4 QEYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKSLE 42
            ++YSSWPTIPQLYV+GEF GG+DIM E FQ+GELKK LE
Sbjct:   63 KDYSSWPTIPQLYVNGEFVGGSDIMAEMFQNGELKKLLE 101          
BLAST of mRNA_L-digitata_M_contig99926.1.1 vs. uniprot
Match: A0A7X8NUS1_9SPHN (Glutaredoxin n=5 Tax=Novosphingobium TaxID=165696 RepID=A0A7X8NUS1_9SPHN)

HSP 1 Score: 69.7 bits (169), Expect = 3.710e-14
Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    6 YSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKSLEDAGCK 47
            YS WPTIPQLYV GEF GG+DIM+E FQ+GEL++ +ED+G K
Sbjct:   64 YSDWPTIPQLYVKGEFVGGSDIMMEMFQAGELQQLMEDSGVK 105          
BLAST of mRNA_L-digitata_M_contig99926.1.1 vs. uniprot
Match: A0A162B0C8_DAUCS (Glutaredoxin domain-containing protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162B0C8_DAUCS)

HSP 1 Score: 68.9 bits (167), Expect = 4.390e-14
Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 QTRQEYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKSLEDA 44
            Q  +EYSSWPT PQLY+DGEF GG DI+IE++QSGEL++ LE A
Sbjct:   40 QGLKEYSSWPTFPQLYIDGEFFGGCDIVIEAYQSGELQELLERA 83          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99926.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8D5_ECTSI1.620e-2487.76Grx_S14-glutaredoxin subgroup II n=1 Tax=Ectocarpu... [more]
A0A6H5KLX0_9PHAE2.040e-2491.84Glutaredoxin domain-containing protein n=1 Tax=Ect... [more]
A0A835Z4Q0_9STRA1.640e-1569.57Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S3I3U2_9SPIT3.220e-1565.91Glutaredoxin n=1 Tax=Favella ehrenbergii TaxID=182... [more]
A0A4Y6KPC8_9RHOO1.990e-1468.75Glutaredoxin n=2 Tax=Azoarcus TaxID=12960 RepID=A0... [more]
A0A0B9A8H8_9SPHN2.620e-1465.91Glutaredoxin n=3 Tax=Novosphingobium TaxID=165696 ... [more]
A0A0N1BJF0_9PROT2.890e-1477.50Glutaredoxin n=1 Tax=alpha proteobacterium AAP81b ... [more]
Q0AHT9_NITEC3.280e-1476.92Glutaredoxin n=4 Tax=Nitrosomonas TaxID=914 RepID=... [more]
A0A7X8NUS1_9SPHN3.710e-1469.05Glutaredoxin n=5 Tax=Novosphingobium TaxID=165696 ... [more]
A0A162B0C8_DAUCS4.390e-1468.18Glutaredoxin domain-containing protein n=2 Tax=Dau... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..51
e-value: 4.9E-12
score: 47.5
NoneNo IPR availablePANTHERPTHR10293:SF16GLUTAREDOXIN-RELATED PROTEIN 5, MITOCHONDRIALcoord: 4..41
NoneNo IPR availablePROSITEPS51354GLUTAREDOXIN_2coord: 1..48
score: 13.52142
IPR004480Monothiol glutaredoxin-relatedPANTHERPTHR10293GLUTAREDOXIN FAMILY MEMBERcoord: 4..41
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 4..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99926contigL-digitata_M_contig99926:136..294 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99926.1.1mRNA_L-digitata_M_contig99926.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99926 136..294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99926.1.1 ID=prot_L-digitata_M_contig99926.1.1|Name=mRNA_L-digitata_M_contig99926.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=53bp
QTRQEYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKSLEDAGCKFVS
SE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004480Monothiol_GRX-rel
IPR036249Thioredoxin-like_sf