prot_L-digitata_M_contig99845.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99845.2.1
Unique Nameprot_L-digitata_M_contig99845.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length229
Homology
BLAST of mRNA_L-digitata_M_contig99845.2.1 vs. uniprot
Match: A0A2D8PQQ7_9PROT (YicC family protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PQQ7_9PROT)

HSP 1 Score: 283 bits (724), Expect = 5.530e-93
Identity = 147/228 (64.47%), Postives = 186/228 (81.58%), Query Frame = 0
Query:    1 LTLQRPDRPPVLDVNRDVLDQMIALAAEYKGGADKVDVETLLGLRGVVEVIESRDEDETEIAQRDAAIAAGFGDLMTALAVARREEGARMGAVVNQHIEEISALTSEAAGLAEMQPASRRDRLAAQLDELLEGENAVAPERLAQELALIVAKGDIREELDRLVAHVSAARDLMAEQGAVGRRLDFLCQEFNREANTLCSKSSDLELTRIGLALKAAIERLREQIQNIE 228
            L++QRP++ PVLDVN++VLD+M+ LAA+Y+GG + V++ET++ LRGVVEV++  DEDE  IA RDAA++   G+L+T LA  R++EG R+  V+  H++EI  LT  A  LA+MQP  R  RL  QLD+LL+GE  V  ERLAQE+A+IVA+GDIREELDRL AHV AAR+ + E GA+GR+LDFLCQEFNREANTLCSKSSDLELTRIGLALKAAIERLREQ+QN+E
Sbjct:   62 LSIQRPEKSPVLDVNQEVLDRMVNLAAKYRGGREHVNIETVMTLRGVVEVVDEADEDEDVIAARDAALSESVGELLTVLAATRKDEGDRLKTVIKDHLDEIVGLTDGARNLADMQPDRRAVRLKEQLDQLLDGETPVPEERLAQEIAMIVARGDIREELDRLEAHVGAAREHLDEGGAIGRQLDFLCQEFNREANTLCSKSSDLELTRIGLALKAAIERLREQVQNVE 289          
BLAST of mRNA_L-digitata_M_contig99845.2.1 vs. uniprot
Match: A0A2S6Q9S9_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q9S9_9PROT)

HSP 1 Score: 257 bits (657), Expect = 9.690e-83
Identity = 132/228 (57.89%), Postives = 176/228 (77.19%), Query Frame = 0
Query:    1 LTLQRPDRPPVLDVNRDVLDQMIALAAEYKGGADKVDVETLLGLRGVVEVIESRDEDETEIAQRDAAIAAGFGDLMTALAVARREEGARMGAVVNQHIEEISALTSEAAGLAEMQPASRRDRLAAQLDELLEGENAVAPERLAQELALIVAKGDIREELDRLVAHVSAARDLMAEQGAVGRRLDFLCQEFNREANTLCSKSSDLELTRIGLALKAAIERLREQIQNIE 228
            L LQRP++PP L++NR VLD++  +AAE +G  D V++E L+ LRGV+EV+E   +D+T+    +AA+ A F DL+  L   R  EGAR+  ++  HI +I+   S+A+GLAE+QP  R+ RL  QL ELL+G+   + ER+AQELALI+A+GD+REELDRL AH++AAR+L+ + GAVGRRLDFLCQE NREANTLCSKSSD+EL R+GL +KAA+ERLREQIQNIE
Sbjct:   68 LVLQRPEKPPALEINRHVLDKLTTVAAEVRGSPDAVNIEALMSLRGVIEVVEEDIDDKTKTIDLEAAVVASFEDLLDGLVNMRSAEGARLLRIIEGHIGDIANFISDASGLAELQPKRRKLRLMEQLGELLDGDTPPSEERIAQELALIIARGDVREELDRLFAHIAAARELLGKGGAVGRRLDFLCQELNREANTLCSKSSDIELIRVGLEIKAAVERLREQIQNIE 295          
BLAST of mRNA_L-digitata_M_contig99845.2.1 vs. uniprot
Match: A0A6N7F673_9PROT (YicC family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F673_9PROT)

HSP 1 Score: 229 bits (583), Expect = 1.310e-71
Identity = 128/230 (55.65%), Postives = 167/230 (72.61%), Query Frame = 0
Query:    1 LTLQRPDRPPVLDVNRDVLDQMIALAAEYKGGADKVD--VETLLGLRGVVEVIESRDEDETEIAQRDAAIAAGFGDLMTALAVARREEGARMGAVVNQHIEEISALTSEAAGLAEMQPASRRDRLAAQLDELLEGENAVAPERLAQELALIVAKGDIREELDRLVAHVSAARDLMAEQGAVGRRLDFLCQEFNREANTLCSKSSDLELTRIGLALKAAIERLREQIQNIE 228
            LT+ RP+RPP L VNRDVLDQ++ALA E  G  +     ++ LL +RGV+E +E+ +E E E A+ D A+ AG  D + AL+VAR EEG R+  ++  H+  I+ L + A    E QPA+  +RL   +  LLE +  ++ ERLAQE+AL+VAK D+REE+DRLVAHV AAR+L+    AVGRRLDFLCQEFNREANTLCSK+  LELTR+GL LKAA+E+LREQIQN+E
Sbjct:   62 LTVARPERPPQLRVNRDVLDQVLALAGELSGRIEAAPPRIDGLLAVRGVLEAVEA-EETEEERARLDEAVTAGCIDALAALSVARGEEGGRLKILIAAHLARIAELAAGAVACGESQPAAVEERLREAVSTLLETDQRLSEERLAQEVALLVAKSDVREEIDRLVAHVEAARELLDSGDAVGRRLDFLCQEFNREANTLCSKAQSLELTRVGLDLKAAVEQLREQIQNVE 290          
BLAST of mRNA_L-digitata_M_contig99845.2.1 vs. uniprot
Match: UPI001A97C4AD (YicC family protein n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001A97C4AD)

HSP 1 Score: 221 bits (563), Expect = 1.340e-68
Identity = 124/217 (57.14%), Postives = 162/217 (74.65%), Query Frame = 0
Query:   14 VNRDVLDQMIALAAEYKG-GADKVDVETLLGLRGVVEVIESRDEDETEIAQR-DAAIAAGFGDLMTALAVARREEGARMGAVVNQHIEEISALTSEAAGLAEMQPASRRDRLAAQLDELLEGENAVAPERLAQELALIVAKGDIREELDRLVAHVSAARDLMAEQGAVGRRLDFLCQEFNREANTLCSKSSDLELTRIGLALKAAIERLREQIQNIE 228
            +NRD+L+Q++ LA E +G GA    +++LL +RG++E +E   EDETE   R +A + A  G L+  LA AR  EG R+ AV++ H++EI+ L   A   A  QP + RD+L AQ+  LL+   A+  ERLAQE AL++AK D+REELDRL AH+ AARD+MAE GA+GRR DFLCQEFNREANTLCSKS+D+ELTRIGL+LKAAIE+LREQ+QNIE
Sbjct:   76 INRDLLNQVLELAREIEGAGAAPPRLDSLLSVRGIIETVE---EDETEARTRIEAPLKADLGRLVGQLAAAREAEGKRLTAVLHAHLDEIARLVDAAGACASTQPQALRDKLRAQVAALLDASPALPEERLAQEAALLIAKADVREELDRLRAHIQAARDMMAEGGAIGRRFDFLCQEFNREANTLCSKSADVELTRIGLSLKAAIEQLREQVQNIE 289          
BLAST of mRNA_L-digitata_M_contig99845.2.1 vs. uniprot
Match: UPI00048B2EA7 (YicC family protein n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI00048B2EA7)

HSP 1 Score: 220 bits (560), Expect = 3.700e-68
Identity = 124/230 (53.91%), Postives = 168/230 (73.04%), Query Frame = 0
Query:    1 LTLQRPDRPPVLDVNRDVLDQMIALAAEYKG-GADKVDVETLLGLRGVVEVIESRDEDETEIAQR-DAAIAAGFGDLMTALAVARREEGARMGAVVNQHIEEISALTSEAAGLAEMQPASRRDRLAAQLDELLEGENAVAPERLAQELALIVAKGDIREELDRLVAHVSAARDLMAEQGAVGRRLDFLCQEFNREANTLCSKSSDLELTRIGLALKAAIERLREQIQNIE 228
            L L R      L +NR++L +++ LA E +G GA    ++ LL +RG++E +E   EDE E  +R +AA+ A  G L+  LA AR  EGAR+  +++ H++EI  L   AAG A +QP + RD+L AQ++ LL+   A+  ERLAQE AL++AK D+REE+DRL AH+ AARDL+AE GA+GRR DFLCQEFNREANTLCSKS+D+ELTRIGL+LKA+IE+LREQ+QN+E
Sbjct:   62 LALTRTATVSQLRINRELLARVLELAREIEGAGAAPPRLDALLSVRGIIEPVE---EDEAESRERLEAALKADLGVLIDRLAAARAAEGARLTTILSGHLDEIGRLVEAAAGCASLQPQALRDKLKAQVNALLDAVPALPEERLAQEAALLIAKADVREEMDRLRAHIQAARDLLAEGGAIGRRFDFLCQEFNREANTLCSKSADVELTRIGLSLKASIEQLREQVQNVE 288          
BLAST of mRNA_L-digitata_M_contig99845.2.1 vs. uniprot
Match: A0A848W778_9PROT (YicC family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W778_9PROT)

HSP 1 Score: 220 bits (560), Expect = 4.570e-68
Identity = 125/230 (54.35%), Postives = 162/230 (70.43%), Query Frame = 0
Query:    1 LTLQRPDRPPVLDVNRDVLDQMIALAAEYKG--GADKVDVETLLGLRGVVEVIESRDEDETEIAQRDAAIAAGFGDLMTALAVARREEGARMGAVVNQHIEEISALTSEAAGLAEMQPASRRDRLAAQLDELLEGENAVAPERLAQELALIVAKGDIREELDRLVAHVSAARDLMAEQGAVGRRLDFLCQEFNREANTLCSKSSDLELTRIGLALKAAIERLREQIQNIE 228
            L + R    P   +N  +LDQ+ AL  E  G   A+   +E LL +RG++E ++  +++  E A+  A I  G  D++  LA AR EEGARM  +V  HIE I+ LT EA+G A  QP + R+RL + + ELL+ + A+  ERLAQE AL+V K D+REELDRL AH++AA DL+AE  AVGRR DFLCQEFNRE+NTLCSKSSD+ELTRIG+ALKAAIE+LREQIQN+E
Sbjct:   67 LAIDRSGALPTYRLNETLLDQVFALQDELSGRVSAEPPSLEGLLAVRGMLETVDVEEDEAAEAAREKAIIQCGI-DVLAGLASARAEEGARMATLVADHIETITGLTEEASGAAAAQPEALRERLRSLVAELLDADPALPEERLAQEAALLVGKADVREELDRLRAHIAAAHDLIAEGDAVGRRFDFLCQEFNRESNTLCSKSSDVELTRIGMALKAAIEQLREQIQNVE 295          
BLAST of mRNA_L-digitata_M_contig99845.2.1 vs. uniprot
Match: W9H1L6_9PROT (Uncharacterized protein n=5 Tax=Skermanella TaxID=204447 RepID=W9H1L6_9PROT)

HSP 1 Score: 217 bits (553), Expect = 4.220e-67
Identity = 119/215 (55.35%), Postives = 159/215 (73.95%), Query Frame = 0
Query:   14 VNRDVLDQMIALAAEYKGGADKVDVETLLGLRGVVEVIESRDEDETEIAQRDAAIAAGFGDLMTALAVARREEGARMGAVVNQHIEEISALTSEAAGLAEMQPASRRDRLAAQLDELLEGENAVAPERLAQELALIVAKGDIREELDRLVAHVSAARDLMAEQGAVGRRLDFLCQEFNREANTLCSKSSDLELTRIGLALKAAIERLREQIQNIE 228
            +NRD+LDQ+IAL+ E  G  +K  ++ LL +RGVVE +E  D  E    + +AA+AA     +  L+  R  EGAR+  V+NQH++EI+ LT +A+  A +QP + R +L  Q+  LLE   ++  ERLAQE AL++ + D+REELDRL AH++AARD++A+ GA+GR+LDFLCQEFNREANTLCSKSSD+ELTR GLALKAAIE+LREQ QNIE
Sbjct:   75 INRDLLDQLIALSMELGGATEKPRLDALLAVRGVVETVEDADGGEDR-ERLEAAMAATLQQALDHLSTVRLAEGARLVHVLNQHLDEIARLTDQASACASLQPEALRQKLRGQVVALLEAIPSLTEERLAQEAALLITRADVREELDRLRAHIAAARDMLAKGGAIGRQLDFLCQEFNREANTLCSKSSDVELTRTGLALKAAIEQLREQAQNIE 288          
BLAST of mRNA_L-digitata_M_contig99845.2.1 vs. uniprot
Match: A0A2U1WNF6_9PROT (Uncharacterized protein n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1WNF6_9PROT)

HSP 1 Score: 217 bits (552), Expect = 5.980e-67
Identity = 123/230 (53.48%), Postives = 169/230 (73.48%), Query Frame = 0
Query:    1 LTLQRPDRPPVLDVNRDVLDQMIALAAEYKG-GADKVDVETLLGLRGVVEVIESRDEDETEIAQR-DAAIAAGFGDLMTALAVARREEGARMGAVVNQHIEEISALTSEAAGLAEMQPASRRDRLAAQLDELLEGENAVAPERLAQELALIVAKGDIREELDRLVAHVSAARDLMAEQGAVGRRLDFLCQEFNREANTLCSKSSDLELTRIGLALKAAIERLREQIQNIE 228
            L + R      + +NR++L Q++ LA E +G GA    ++ LL +RG++E +E   EDETE  +R DAA+    G ++  LA AR  EGAR+  ++N H++EI+ LT  +A  + +QP   +++L AQ+  LL+   A++ +RLAQE ALI+AKGD+REE+DRL AHV AARDL+AE GA+GRR DFLCQEFNREANTLCSKS+D+ELTRIGL+LKA+IE+LREQ+QNIE
Sbjct:   62 LNVTRTSTVSQIRINRELLAQVLELAREIEGEGAAPPRLDALLTVRGIIEPVE---EDETEARERLDAALKKDLGAVVGRLASARAAEGARLVTILNGHLDEIARLTEASAACSSVQPEVLKEKLRAQVAALLDAVPALSEDRLAQEAALIIAKGDVREEMDRLRAHVQAARDLLAEGGAIGRRFDFLCQEFNREANTLCSKSADVELTRIGLSLKASIEQLREQVQNIE 288          
BLAST of mRNA_L-digitata_M_contig99845.2.1 vs. uniprot
Match: A0A154WEK9_9PROT (Uncharacterized protein n=2 Tax=Oceanibaculum pacificum TaxID=580166 RepID=A0A154WEK9_9PROT)

HSP 1 Score: 216 bits (549), Expect = 2.160e-66
Identity = 121/230 (52.61%), Postives = 159/230 (69.13%), Query Frame = 0
Query:    1 LTLQRPDRPPVLDVNRDVLDQMIALAAEYKGGADKVD--VETLLGLRGVVEVIESRDEDETEIAQRDAAIAAGFGDLMTALAVARREEGARMGAVVNQHIEEISALTSEAAGLAEMQPASRRDRLAAQLDELLEGENAVAPERLAQELALIVAKGDIREELDRLVAHVSAARDLMAEQGAVGRRLDFLCQEFNREANTLCSKSSDLELTRIGLALKAAIERLREQIQNIE 228
            LT++R      + +NR VLDQ++AL A+  G  D     +E LL +RG+VE  E   + +   A R+AA+A G  + +  LA AR EEG R+ A++  H+E I+ALT +A  +A  QP + + RL  Q+ ELLE   A+  E+LAQE AL+ A+ DIREELDRL AHV+AA DLM E   +GRR DFLCQEFNREANTLCSKSSD+ELTRIGL LKA I++L+EQ+QN+E
Sbjct:   67 LTIERKATDTGIRINRAVLDQVLALQADLAGKVDSAPPRLEALLSVRGIVEAGEEEADTQEARAAREAALAKGLHEAVAKLAAARLEEGGRLAAILTGHLERIAALTVQAGTIAAAQPEALKARLRQQVTELLEASPALPEEKLAQEAALLAARADIREELDRLAAHVAAAGDLMKEGALIGRRFDFLCQEFNREANTLCSKSSDVELTRIGLELKAVIDQLKEQVQNVE 296          
BLAST of mRNA_L-digitata_M_contig99845.2.1 vs. uniprot
Match: A0A848ZFZ3_9PROT (YicC family protein n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848ZFZ3_9PROT)

HSP 1 Score: 215 bits (547), Expect = 3.400e-66
Identity = 123/229 (53.71%), Postives = 160/229 (69.87%), Query Frame = 0
Query:    1 LTLQRPDRPPVLDVNRDVLDQMIALAAEYKG-GADKVDVETLLGLRGVVEVIESRDEDETEIAQRDAAIAAGFGDLMTALAVARREEGARMGAVVNQHIEEISALTSEAAGLAEMQPASRRDRLAAQLDELLEGENAVAPERLAQELALIVAKGDIREELDRLVAHVSAARDLMAEQGAVGRRLDFLCQEFNREANTLCSKSSDLELTRIGLALKAAIERLREQIQNIE 228
            L LQ  DRP  + +NR++LD ++ +AAE +G GA K  ++ LL +RG++E +E  DE E E A+  AA+    G  +  LA AR EEG R+  V+  H++ I  L + A   A  QP +  +RL  Q+ ELL+    +  ERLAQE ALI AK DIREELDRL AHV+ AR+++A  GAVGRRLDFLCQEFNREANTLCSK++D++LTRIGL LKA +E+LREQIQNIE
Sbjct:   62 LVLQAADRPLRMRINRELLDDVLRVAAELEGAGAAKPRLDALLAVRGIIEPVEEEDEAEREAAE--AAMLTVLGQALDGLAAARAEEGGRLLPVLTGHLDRIEELVAAARASAGAQPQALAERLRTQVAELLQASAGLPEERLAQEAALIAAKADIREELDRLSAHVAQAREMLAAAGAVGRRLDFLCQEFNREANTLCSKAADVDLTRIGLDLKATVEQLREQIQNIE 288          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99845.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8PQQ7_9PROT5.530e-9364.47YicC family protein n=1 Tax=Rhodospirillaceae bact... [more]
A0A2S6Q9S9_9PROT9.690e-8357.89Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A6N7F673_9PROT1.310e-7155.65YicC family protein n=1 Tax=Alphaproteobacteria ba... [more]
UPI001A97C4AD1.340e-6857.14YicC family protein n=1 Tax=Azospirillum sp. SYSU ... [more]
UPI00048B2EA73.700e-6853.91YicC family protein n=1 Tax=Azospirillum halopraef... [more]
A0A848W778_9PROT4.570e-6854.35YicC family protein n=1 Tax=Alphaproteobacteria ba... [more]
W9H1L6_9PROT4.220e-6755.35Uncharacterized protein n=5 Tax=Skermanella TaxID=... [more]
A0A2U1WNF6_9PROT5.980e-6753.48Uncharacterized protein n=1 Tax=Azospirillum sp. T... [more]
A0A154WEK9_9PROT2.160e-6652.61Uncharacterized protein n=2 Tax=Oceanibaculum paci... [more]
A0A848ZFZ3_9PROT3.400e-6653.71YicC family protein n=1 Tax=Inquilinus sp. TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 217..228
IPR013527YicC-like, N-terminalPFAMPF03755YicC_Ncoord: 8..90
e-value: 6.8E-6
score: 26.6
IPR013551Domain of unknown function DUF1732PFAMPF08340DUF1732coord: 144..228
e-value: 1.7E-32
score: 111.3
IPR005229Conserved hypothetical protein CHP00255PANTHERPTHR30636UNCHARACTERIZEDcoord: 4..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99845contigL-digitata_M_contig99845:261..947 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99845.2.1mRNA_L-digitata_M_contig99845.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99845 261..947 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99845.2.1 ID=prot_L-digitata_M_contig99845.2.1|Name=mRNA_L-digitata_M_contig99845.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=229bp
LTLQRPDRPPVLDVNRDVLDQMIALAAEYKGGADKVDVETLLGLRGVVEV
IESRDEDETEIAQRDAAIAAGFGDLMTALAVARREEGARMGAVVNQHIEE
ISALTSEAAGLAEMQPASRRDRLAAQLDELLEGENAVAPERLAQELALIV
AKGDIREELDRLVAHVSAARDLMAEQGAVGRRLDFLCQEFNREANTLCSK
SSDLELTRIGLALKAAIERLREQIQNIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013527YicC-like_N
IPR013551DUF1732
IPR005229CHP00255