prot_L-digitata_M_contig99749.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99749.1.1
Unique Nameprot_L-digitata_M_contig99749.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length311
Homology
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BLAST of mRNA_L-digitata_M_contig99749.1.1 vs. uniprot
Match: A0A2W5TIB3_9DELT (Uncharacterized protein n=1 Tax=Archangium gephyra TaxID=48 RepID=A0A2W5TIB3_9DELT)

HSP 1 Score: 108 bits (270), Expect = 1.570e-22
Identity = 118/242 (48.76%), Postives = 147/242 (60.74%), Query Frame = 0 
Query:    1 VVARNVTGSAT-LAGFVVQGWDASPSLNSGADGRNSVAILISNSGPGLTITNNLIRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXCQSASCAGESQTGGPPGVNSSCTGANARPGATARGNQSNQDYQPPLGSDGLGGTNARYSSANNPQFAEFCKYDCTILGE-LEGQDADDGSVGXXXXXXXGCNSTQGRLSGDTWTSASAXXXXXXXXXXXXXXXXXXXSVINTNPTSCRVGNRVGDL 240
            V A ++ G+AT ++GF ++G+D       G   RNS A+ + +SG GL I NN I GGR   XXXXXXXXXXXXXXXXXXXX    C +  C  E+Q GG PG N SC  A    GA        Q Y    G +G GG+NA Y  ++ P   +FCKYDCT+ G+ L G  A +G+ G       GC+ T+G + G  W +A+   XXXXXXXXXXXXXXXXX V NTNP +C +G RVGDL
Sbjct:  817 VNAESLGGTATVISGFTIRGYDVISRPAVGTAARNSYAVYVRDSG-GLVIQNNHIVGGRGGDXXXXXXXXXXXXXXXXXXXXNARECNTPDCTNETQAGGAPGTNPSCM-ATGNFGAGTNLELDPQQYGSFGGVNGRGGSNAVYRHSD-PSQTQFCKYDCTVPGDGLAGGAAQNGADGTPTGRGLGCSMTRGFIMGGDWATAAGTSXXXXXXXXXXXXXXXXXCVRNTNPATCTIGRRVGDL 1055
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99749.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2W5TIB3_9DELT1.570e-2248.76Uncharacterized protein n=1 Tax=Archangium gephyra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99749contigL-digitata_M_contig99749:17..949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99749.1.1mRNA_L-digitata_M_contig99749.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99749 17..949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99749.1.1 ID=prot_L-digitata_M_contig99749.1.1|Name=mRNA_L-digitata_M_contig99749.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=311bp
VVARNVTGSATLAGFVVQGWDASPSLNSGADGRNSVAILISNSGPGLTIT
NNLIRGGRGGDGAPGNAGTSGGNGPAGSDGRDARECQSASCAGESQTGGP
PGVNSSCTGANARPGATARGNQSNQDYQPPLGSDGLGGTNARYSSANNPQ
FAEFCKYDCTILGELEGQDADDGSVGSDGRGGQGCNSTQGRLSGDTWTSA
SASAGAAGLVGRGGGGGGAGGSVINTNPTSCRVGNRVGDLGSTGGGGGAG
GCGGAGGGPGGGGGGSFGILLISSPAGAPQILANRVVRGAGGDGGSGGTG
GDGGQGGQGGQ
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