prot_L-digitata_M_contig99724.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99724.1.1
Unique Nameprot_L-digitata_M_contig99724.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length212
Homology
BLAST of mRNA_L-digitata_M_contig99724.1.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 1.180e-74
Identity = 103/188 (54.79%), Postives = 135/188 (71.81%), Query Frame = 0
Query:   24 PYPFGDKFKGDGTYYGDVSPGEGNCAIEHPIPSMYDGMIPMAVSLYGMYDDSVVCGACIEGTGTGNGAGKNPIKGKFKGFVSDSCEECAKGDLDFAKNGDGRWDIEWKFVECPSGGDPSFIFEGSNEWYWKIQARETKSPVTQLWVDGKKATMTQDNFFTAQGGPFYGEQVVKTKTLFGDEKKTKVSL 211
            P P+ ++F GD TYYG    G+GNCAI  P+P MYDGMIP+A++    Y DS +CGACIEG G G G G++P++G FK +V+D C EC  GDLDFA +GDGRWDI W FV C  G D +F+FEGSNE+YWKIQ R  +SPV +LW++G +A  ++DNFF  +GGPF GEQ V TKT+    ++  V++
Sbjct:   34 PPPYDEQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDE-QYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILEGGPFDGEQEVHTKTVLNKRRRQSVAM 220          
BLAST of mRNA_L-digitata_M_contig99724.1.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 1.380e-57
Identity = 91/187 (48.66%), Postives = 124/187 (66.31%), Query Frame = 0
Query:   27 FGDKFKGDGTYYGDVSPGEGNCAIEHPIPSMYDGMIPMAVSLYGMYDDSVVCGACIEGTGTGNGAGKNPIKGKFKGFVSDSCEECAKGDLDFAKNGDGRWDIEWKFVECPSGGDPSFIFEGSNEWYWKIQARETKSPVTQLWVDGKKATMTQDNFFTAQ--GGPFYGEQVVKTKTLFGDEKKTKVSL 211
            +G+++ G+GTYYG  +   G C+    +P MYDGMIP+A++    Y DS++CGAC+EGT +G+G+G NPI   FK F++D C EC KGDLDF+ +GDGRWDIEWKFV CP G + SF+   +N +YWK+Q R T +PV  L VDG+ A  T DN F     G  + G Q V T T+ G  +  +VS+
Sbjct:  104 YGEEYSGEGTYYGHTT--AGMCSFFDDVPEMYDGMIPVALNAE-QYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACP-GEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTVSGVTETAEVSV 286          
BLAST of mRNA_L-digitata_M_contig99724.1.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 1.020e-53
Identity = 92/188 (48.94%), Postives = 123/188 (65.43%), Query Frame = 0
Query:   27 FGDKFKGDGTYYGDVSPGEGNCAIEHPIPSMYDGMIPMAVSLYGMYDDSVVCGACIEGTGTGNGAGKNPIKGKFKGFVSDSCEECAKGDLDFAKNGDGRWDIEWKFVECPSGGDPSFIFEGSNEWYWKIQARETKSPVTQLWVDGKKATMTQDNFFTAQ---GGPFYGEQVVKTKTLFGDEKKTKVSL 211
            +G  F G+GTYY   S   GNC      PS+YDGM P+A++    Y DS++CGAC+EG GTG G+G +P+ G FKGF+ D C EC++GDLDF    DGRWDI+WKFVECP+G + SF  E   E+YWKIQ R T +PV  L + G+ A  T DN F  +   G P+Y  Q+V T T+ G  ++T++S+
Sbjct:  311 YGITFNGEGTYYTGTS--AGNCGFFDDFPSIYDGMTPVALN-EPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGDPWYEPQMVVTTTVGGVVEETEMSV 494          
BLAST of mRNA_L-digitata_M_contig99724.1.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR)

HSP 1 Score: 180 bits (457), Expect = 6.420e-53
Identity = 92/204 (45.10%), Postives = 131/204 (64.22%), Query Frame = 0
Query:    1 MNNILVLAAVVGTSLIVSPASAAPYPFGDKFKGDGTYYGDVSPGEGNCAIEHPIPSMYDGMIPMAVSLYGMYDDSVVCGACIEGTGTGNGAGKNPIKGKFKGFVSDSCEECAKGDLDFAKNGDGRWDIEWKFVECPSGGDPSFIFEGSNEWYWKIQARETKSPVTQLWVDGKKATMTQDNFFTAQ-GGPFYGEQVVKTKTLFGD 203
            MN+ ++LA  +  +++ +  S  P  +   F G+GTYYG  +   GNCAI  P+PSMY+GM+P+A++    Y++S  CGAC++ TG G G+G NPI+G FK +V D C EC  GD+D +K GDGRW + WKF+ CP G    F+FEGSN +Y K+Q R  K+PV+ L V G+  T TQDNF+  Q GG F     V+ +T+  +
Sbjct:    1 MNSPVILALALLLAVVANAMS--PNDYYRVFHGEGTYYGYTT--RGNCAIRSPMPSMYNGMLPVAIN-NAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCP-GEFVFFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIVQNGGGFRFPITVQMRTVLNE 198          
BLAST of mRNA_L-digitata_M_contig99724.1.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 2.550e-49
Identity = 93/197 (47.21%), Postives = 121/197 (61.42%), Query Frame = 0
Query:   18 SPASAAPYPFGDKFKGDGTYYGDVSPGEGNCAIEHPIPSMYDGMIPMAVSLYGMYDDSVVCGACIEGTGTGNGAGKNPIKGKFKGFVSDSCEECAKGDLDFAKNGDGRWDIEWKFVECPSGGDPSFIFEGSNEWYWKIQARETKSPVTQLWVDGKKATMTQDNFFTAQ---GGPFYGEQVVKTKTLFGDEKKTKVSL 211
            +P S   Y  G  F+GDGTYY  +S   GNC      PS+Y GM P+A++    Y DS++CG+C+EG GTG G G NPI G FKGF+ D C EC +GDLDF    DGRWDIEW+FV CP G + SF       +YWKIQ R T +PV  L + G+ A  T DN F  +   G P+Y  Q+V T T+ G  ++T++S+
Sbjct:  341 TPISGGVY--GTTFEGDGTYYTGIS--AGNCGFFDDFPSIYSGMTPVALNA-AQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACP-GEEVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTVGGVVEETEMSV 530          
BLAST of mRNA_L-digitata_M_contig99724.1.1 vs. uniprot
Match: A0A1X6NJE1_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJE1_PORUM)

HSP 1 Score: 155 bits (393), Expect = 3.620e-44
Identity = 85/187 (45.45%), Postives = 110/187 (58.82%), Query Frame = 0
Query:   11 VGTSLIVSP-ASAAPYPFGDKFK------GDGTYYGDVSPGEGNCAIEHPIPSMYDGMIPMAVSLYGMYDDSVVCGACIEGTGTGNGAGKNPIKGKFKGFVSDSCEECAKGDLDFAKNGDGRWDIEWKFVECPS-GGDPSFIFEGSNEWYWKIQARETKSPVTQLWVDGKKATMTQDNFF-TAQGGP 188
            V T+L+ +  A+AA  P G   +      G+GTY+G  +   GNCA++ P+P+ Y G++ +AVS    Y  S  CGAC+  TG+G+GAG NPI G F  +V D C ECA GDLD A  GDGRW + W  V CP+ GG P F+ EGSN  Y K+Q R   +P   + V G     TQDNFF  A  GP
Sbjct:   21 VATALLAATVAAAAAAPLGAALRAGQTGAGEGTYFGPTT--RGNCALD-PLPAQYGGLVGVAVSTAD-YAGSAACGACLRVTGSGDGAGANPITGTFSAYVMDRCPECAAGDLDLATPGDGRWAVSWTVVPCPTAGGAPEFLLEGSNPHYLKVQVRGLPAPAASVSVGGAACARTQDNFFIVATAGP 203          
BLAST of mRNA_L-digitata_M_contig99724.1.1 vs. uniprot
Match: A0A2P6NBD6_9EUKA (Endochitinase-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBD6_9EUKA)

HSP 1 Score: 151 bits (381), Expect = 1.520e-38
Identity = 82/184 (44.57%), Postives = 105/184 (57.07%), Query Frame = 0
Query:   15 LIVSPASAAPYPFGDKFK---GDGTYYGDVSPGEGNCAIEHPIPSMYDGMIPMAVSLYGMY-DDSVVCGACIEGTGTGNGAGKNPIKGKFKGFVSDSCEECAKGDLDFAKNGDGRWDIEWKFVECPSGGDPSFI-FEGSNEWYWKIQARETKSPVTQLWVDG------KKATMTQDNFFTAQGG 187
            L+   A+AA   F D F    G  TYYGD   G GNC I +P+P      I ++V++   Y   S  CG+CI+ TG+G GAG NP+KG F  FV+D C  C  G LDFAKNGDG WDI WK V+CP G    +  F+GSNEWY K+QAR  ++P+  + +        +K   T DNFF    G
Sbjct:  318 LLFLAAAAAAQQFSDLFNTQNGKATYYGDDGTG-GNCQI-YPVPQNIKSNIDVSVAMVSAYWFGSAACGSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIYYAFQGSNEWYMKVQARNHRTPLNFISIQDPNTKQYRKMKRTGDNFFELPDG 499          
BLAST of mRNA_L-digitata_M_contig99724.1.1 vs. uniprot
Match: A0A2P6NBF0_9EUKA (MAP/microtubule affinity-regulating kinase 3-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBF0_9EUKA)

HSP 1 Score: 151 bits (381), Expect = 1.580e-38
Identity = 82/184 (44.57%), Postives = 105/184 (57.07%), Query Frame = 0
Query:   15 LIVSPASAAPYPFGDKFK---GDGTYYGDVSPGEGNCAIEHPIPSMYDGMIPMAVSLYGMY-DDSVVCGACIEGTGTGNGAGKNPIKGKFKGFVSDSCEECAKGDLDFAKNGDGRWDIEWKFVECPSGGDPSFI-FEGSNEWYWKIQARETKSPVTQLWVDG------KKATMTQDNFFTAQGG 187
            L+   A+AA   F D F    G  TYYGD   G GNC I +P+P      I ++V++   Y   S  CG+CI+ TG+G GAG NP+KG F  FV+D C  C  G LDFAKNGDG WDI WK V+CP G    +  F+GSNEWY K+QAR  ++P+  + +        +K   T DNFF    G
Sbjct:  711 LLFLAAAAAAQQFSDLFNTQNGKATYYGDDGTG-GNCQI-YPVPQNIKSNIDVSVAMVSAYWFGSAACGSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIYYAFQGSNEWYMKVQARNHRTPLNFISIQDPNTKQYRKMKRTGDNFFELPDG 892          
BLAST of mRNA_L-digitata_M_contig99724.1.1 vs. uniprot
Match: A0A2V0PJ07_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PJ07_9CHLO)

HSP 1 Score: 135 bits (339), Expect = 8.970e-36
Identity = 74/196 (37.76%), Postives = 111/196 (56.63%), Query Frame = 0
Query:   22 AAPYPFGDKFKGDGTYYGDVSPGEGNCAIE---HPIPSMYDGMIPMAVSLYGMYDDSVVCGACIEGTGTGNGAGKNPIKGKFK-GFVSDSCEECAKGDLDFAKNGDGRWDIEWKFVECPSGGDP-SFIFEGSNEWYWKIQARETKSPVTQLWVDG----KKATMTQDNFFTAQG--GPFYGE---QVVKTKTLFGD 203
            AA  PFG KF GDGTYYG+   G G+C+     H     Y G  P+A++    Y  + +CG C+   GTG GAG NPI   ++ GF+ D C ECA G +D  KNGDGRW +EW+ V+CP G    ++ ++G N++Y K+Q    ++P+++L +      ++A  T DN+F   G    F+G      ++  ++ GD
Sbjct:   18 AAGNPFGSKFAGDGTYYGNRDRGFGHCSFHFHGHGNKPGYLGT-PLAINA-AQYTGTSICGLCVRFRGTGGGAGGNPISSDWQPGFICDECPECAFGSIDLQKNGDGRWKVEWEPVQCPVGSSNFAYGYQGGNDYYKKVQVANARAPISKLEIKRNGAWQQAVATIDNYFEVHGYVADFWGSGGCASIRVTSILGD 211          
BLAST of mRNA_L-digitata_M_contig99724.1.1 vs. uniprot
Match: A0A7S4IRK7_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IRK7_9EUKA)

HSP 1 Score: 132 bits (333), Expect = 1.540e-33
Identity = 76/189 (40.21%), Postives = 111/189 (58.73%), Query Frame = 0
Query:   33 GDGTYYGDVSPGEGNCAIEHPIPSMYD-GMIPMAVSLYG-MYDDSVVCGACIEGTGTGNGAGKNPIKGKFKGFVSDSCEECAKGDLDFAKNGDGRWDIEWKFVECPSG-GDPSFIFEGSNEWYWKIQARETKSPVTQLWV---DGKKA---TMTQDNFFTAQGGP-FYGEQVVKTKTLFGDEKKTKVSL 211
            G+GTYYG  S   G+C ++  +P +     I   V++    Y  S+ CG CI+ TG G G+G +PI G F  +VSD C ECA GDLD A++GDGRW+IEW  V+CP   GD  ++ +GSN+++ K+Q R  + PV+QL++   DG+     T T DNFFT Q      G   V+ +++ G      V++
Sbjct:   21 GEGTYYGPSS--SGSCTLDFNLPPVAQTSEIFSTVAMNSPQYYGSLTCGMCIQMTGEGVGSGADPIDGTFIVYVSDLCPECASGDLDVAQSGDGRWEIEWTAVDCPGNYGDLQYLGQGSNDFFLKVQVRNHRVPVSQLYLLDADGQSRITMTPTSDNFFTYQSSSSLSGSYTVQVESVDGQAVDDVVTI 207          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99724.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHU1_ECTSI1.180e-7454.79Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879... [more]
D8LRN1_ECTSI1.380e-5748.66Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D8LGP4_ECTSI1.020e-5348.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2V3ISL2_9FLOR6.420e-5345.10Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=... [more]
A0A6H5KBW3_9PHAE2.550e-4947.21Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A1X6NJE1_PORUM3.620e-4445.45Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A2P6NBD6_9EUKA1.520e-3844.57Endochitinase-like n=1 Tax=Planoprotostelium fungi... [more]
A0A2P6NBF0_9EUKA1.580e-3844.57MAP/microtubule affinity-regulating kinase 3-like ... [more]
A0A2V0PJ07_9CHLO8.970e-3637.76Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A7S4IRK7_9EUKA1.540e-3340.21Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 27..135
e-value: 1.1E-12
score: 50.0
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 23..156
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3D2.60.40.760coord: 136..211
e-value: 2.5E-6
score: 29.6
NoneNo IPR availablePANTHERPTHR31836FAMILY NOT NAMEDcoord: 15..182
NoneNo IPR availablePANTHERPTHR31836:SF21EXPANSIN-LIKE PROTEIN 2coord: 15..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99724contigL-digitata_M_contig99724:261..896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99724.1.1mRNA_L-digitata_M_contig99724.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99724 242..896 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99724.1.1 ID=prot_L-digitata_M_contig99724.1.1|Name=mRNA_L-digitata_M_contig99724.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=212bp
MNNILVLAAVVGTSLIVSPASAAPYPFGDKFKGDGTYYGDVSPGEGNCAI
EHPIPSMYDGMIPMAVSLYGMYDDSVVCGACIEGTGTGNGAGKNPIKGKF
KGFVSDSCEECAKGDLDFAKNGDGRWDIEWKFVECPSGGDPSFIFEGSNE
WYWKIQARETKSPVTQLWVDGKKATMTQDNFFTAQGGPFYGEQVVKTKTL
FGDEKKTKVSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036908RlpA-like_sf
IPR036749Expansin_CBD_sf