prot_L-digitata_M_contig99708.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99708.1.1
Unique Nameprot_L-digitata_M_contig99708.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length215
Homology
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BLAST of mRNA_L-digitata_M_contig99708.1.1 vs. uniprot
Match: A0A0R5QMD6_SACJA (Mannose-6-phosphate isomerase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QMD6_SACJA)

HSP 1 Score: 246 bits (627), Expect = 1.230e-74
Identity = 168/214 (78.50%), Postives = 173/214 (80.84%), Query Frame = 0 
Query:    1 QVAALVSRLVKNAPVVNPGRPVSPPPSENPERAPEPIREVLIAHKAAVKSQAADDASQGPTXXXXXXXXXXXXXXXXXXADGCAIPAVPEGHVVGGGKLTRNASMHLGGHLGGSMRGG--GKHAMVGTLPSAKLSHDSLDRMLDVXXXXXXXXXXXXXXXXXXXXXSSPVRAEPGAPCARDTLADETASEEIFGKAFRGGPEAATRLAARLQRE 212
            QVAALVSRL KNAPVVNPGRPVSPPPS+NPERAPEPIRE LIAHKAAV+S           XXXXXXXXXXXXXXXXX ADGC IPAVPEG V+GGG LTRNASMHL    GGSMRGG  G+ AMVGTLPSAKLSHDSLDRMLDV   XXXXXX            SSP+RAEPG  CARDTLADETASEEIFGKAFRGGPEAATRLAARLQRE
Sbjct:  203 QVAALVSRLEKNAPVVNPGRPVSPPPSKNPERAPEPIREALIAHKAAVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADGCVIPAVPEGCVIGGGSLTRNASMHL----GGSMRGGAGGRQAMVGTLPSAKLSHDSLDRMLDVDVGXXXXXXAVSVSGDGSE--SSPIRAEPGDKCARDTLADETASEEIFGKAFRGGPEAATRLAARLQRE 410
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BLAST of mRNA_L-digitata_M_contig99708.1.1 vs. uniprot
Match: D7FPP3_ECTSI (Mannose-6-phosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPP3_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 2.710e-7
Identity = 49/117 (41.88%), Postives = 57/117 (48.72%), Query Frame = 0 
Query:   99 LTRNASMHLGGHL-GGSMRGGGKHA--MVGTLPSAKLSHDSLDRMLDVXXXXXXXXXXXXXXXXXXXXXSSPVRAEPGAPCARDTLADETASEEIFGKAFRGGPEAATRLAARLQRE 212
            L +N SMHLGG++  G  +GG       +GT+PS  +   S D                          SSP  AE     A D LAD   SEEIFGKAFRGGP+AA  L ARLQRE
Sbjct:  265 LNKNPSMHLGGYVFKGGEQGGAPSPPPTLGTVPSFSVGSPSRD------------------GADCDASVSSPPGAEERKR-AEDVLADVDKSEEIFGKAFRGGPKAAAGLMARLQRE 362
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99708.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0R5QMD6_SACJA1.230e-7478.50Mannose-6-phosphate isomerase n=2 Tax=Saccharina j... [more]
D7FPP3_ECTSI2.710e-741.88Mannose-6-phosphate isomerase n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99708contigL-digitata_M_contig99708:138..782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99708.1.1mRNA_L-digitata_M_contig99708.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99708 138..782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99708.1.1 ID=prot_L-digitata_M_contig99708.1.1|Name=mRNA_L-digitata_M_contig99708.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=215bp
QVAALVSRLVKNAPVVNPGRPVSPPPSENPERAPEPIREVLIAHKAAVKS
QAADDASQGPTPTLTPSTSLSASTSSSSSADGCAIPAVPEGHVVGGGKLT
RNASMHLGGHLGGSMRGGGKHAMVGTLPSAKLSHDSLDRMLDVDVGVGVG
VDVEAVGVNGDGSGSSPVRAEPGAPCARDTLADETASEEIFGKAFRGGPE
AATRLAARLQREVG*
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