prot_L-digitata_M_contig9965.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9965.1.1
Unique Nameprot_L-digitata_M_contig9965.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length798
Homology
BLAST of mRNA_L-digitata_M_contig9965.1.1 vs. uniprot
Match: D7G7K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K0_ECTSI)

HSP 1 Score: 591 bits (1523), Expect = 1.760e-182
Identity = 442/905 (48.84%), Postives = 496/905 (54.81%), Query Frame = 0
Query:    1 RSYLEHVREAFGDHGPPPAFPAPAGQRMEAFRRRERG------------DGGRLSPSLLRVCVGDVSAGVTPPTCGETLCRGLLERLDQHPPPVGTDFGAIARINFSVRCADVRAGMRQFPRPLFSCETVSAGGAAMGAWARAPLE----LAAVKHAVIADKELR----------NGVASAFPVGSAVAASASRXXXXXXXXXXXXGTVAVVTRDLPAKAYLDLSVCIERPRFEYSPAHTYALVDMANAGKLLMPRGLFVQVASGRTGATGAGSAGGGAGVPPLAWWDTGRCMVHGKFDATVFGGTCHSSHGXXXXXXXXXXXXXXXXXXXVGSVAGP---SPGSASISSSSGTRLSWKPSAATLRRDRGGSGGLHRGXXXXXXXXXXXXXXXSGXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGAGETRGRFRSSS---------SWGHRSGSGSCXXXXXXXXXXX---GVGG-----------------GAGVLNELQEGKVLAVTIAVLRVGWAGAGRVALEVTGFGFEASPSPAPGLPPFLELPTLRRGGGWCTISVSWHTLGGPSPDHWVYVRPP------------------------------------APGF-LKPSPRTDGVDAAGTSAANASPVGGGMGGPAVTAVAGKADRGGEGGAEGEGVGAA---VRASLPNRPTGGAPPPLPPGLPLPQALVSDLSCLPPRMTVSVFGCCLGWAVEWGTCFSKVPPVPVPRLRCRPPSS---------RLVGGNGSSGRGWTGASGGVITRRSSSDASVFSRLMRDAQGSPAKALSEQAAGGGPSIGCDDRHRVARRVSTTPSEGFADLVRGLRLGPLCLSEVDVSVYDKAPADLGKRGVRLSIRGGVAVSLCFSVEKSGAINPFTTGR 798
            RSYLEHVR+ FGDHGPPPAFP P      A R++                GG  SP L+RV VGDVSA VTPP+ GE LCRGLL+RLD+HPPPVGT FG +AR+ FSVRC+++   +RQF +PLFSCE VSAGG AM A ARAP      L  VK  VI ++E             G   A P  S VA    R            G VAVVTRDLP K YLDLSVC+ERPRFE+SPAHTYAL D+A+A  LL+P  LF QVA G  G TG G       VPPLAWWD GRCMVHGKFDATVFG    ++ G                    G+V G    SPGS+S+ +SSG RLSWK S    RRDR GS                                      XXXXXXXXXXX +EG  ++ G  RSSS         S G R  SG    XXXXXXXXX   GVG                  G G L  L++GK L VT  VLRVGWAGAGRVALE TGFG EASP PAPGLPP  ELPTLR     CT  V+WHTLGGPSPDHWVYVRP                                     +PG   +P P T G D         S VGG       TAVAG       GGA  EGVG     VRA+LPNRPTG             ++LVSDLS LPPRM+ SVFGCCLGWAVEWGTCFSKVPPVPVPR +CR P+S             G  ++G G  G+S     R SSSDA+VFSRL R+A+G                       +    +   P + FADLVRG RLGP+ L+E+D S Y+ APAD  KRGVRLSIRGGVA SLCFSVEKSGAINPFTTGR
Sbjct: 1892 RSYLEHVRDTFGDHGPPPAFPLPGAATATAARKKAAAAASPRPGVWGCEGGGTWSPRLVRVRVGDVSADVTPPSGGEGLCRGLLDRLDRHPPPVGTGFGVLARLGFSVRCSNIVTSLRQFDQPLFSCERVSAGGVAMVACARAPPHSGGSLTGVKVVVIDEREAXXXXXXXXXXXRGRQHAAP--SEVAGGGGR------------GKVAVVTRDLPPKVYLDLSVCVERPRFEFSPAHTYALADLASAATLLLPPNLFPQVAPGSRG-TGTGR----DVVPPLAWWDAGRCMVHGKFDATVFGAPATTAPGGGRPAGQS------------GTVPGSGNASPGSSSLPTSSGHRLSWK-SGGVWRRDRRGS--------------------------------------XXXXXXXXXXXVDEG--DSFGSMRSSSPPFPEVVGISGGGRRHSGPVGVXXXXXXXXXXAFGVGDXXXXXXXXXXXXXXXSRGEG-LEGLEKGKTLMVTCVVLRVGWAGAGRVALETTGFGVEASPPPAPGLPPLFELPTLR-----CTFVVAWHTLGGPSPDHWVYVRPTVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGTRAEPDPSTIGQDL--------SAVGG-------TAVAG-------GGAREEGVGGGAQQVRATLPNRPTGXXXXXXXXXXXXXESLVSDLSGLPPRMSASVFGCCLGWAVEWGTCFSKVPPVPVPRRKCRVPTSLGWPSPGTQTSATGGSTAGVGAVGSST-ARKRASSSDATVFSRLRREAEGXXXXXXXXXXXXXXXXXXXXXXXQTPAVIVQPPCDSFADLVRGFRLGPVFLAEMDASAYNTAPADPHKRGVRLSIRGGVAASLCFSVEKSGAINPFTTGR 2695          
BLAST of mRNA_L-digitata_M_contig9965.1.1 vs. uniprot
Match: A0A6H5KJB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB8_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.650e-17
Identity = 48/60 (80.00%), Postives = 52/60 (86.67%), Query Frame = 0
Query:  739 VRGLRLGPLCLSEVDVSVYDKAPADLGKRGVRLSIRGGVAVSLCFSVEKSGAINPFTTGR 798
            VRG RLGP+ L+E+D S Y+ APAD  KRGVRLSIRGGVA SLCFSVEKSGAINPFTTGR
Sbjct:    8 VRGFRLGPVFLAEMDASAYNTAPADPHKRGVRLSIRGGVAASLCFSVEKSGAINPFTTGR 67          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9965.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7K0_ECTSI1.760e-18248.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJB8_9PHAE2.650e-1780.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 567..597
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..330

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9965contigL-digitata_M_contig9965:355..9016 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9965.1.1mRNA_L-digitata_M_contig9965.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9965 355..9016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9965.1.1 ID=prot_L-digitata_M_contig9965.1.1|Name=mRNA_L-digitata_M_contig9965.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=798bp
RSYLEHVREAFGDHGPPPAFPAPAGQRMEAFRRRERGDGGRLSPSLLRVC
VGDVSAGVTPPTCGETLCRGLLERLDQHPPPVGTDFGAIARINFSVRCAD
VRAGMRQFPRPLFSCETVSAGGAAMGAWARAPLELAAVKHAVIADKELRN
GVASAFPVGSAVAASASRRGGGSGEGGDGGGTVAVVTRDLPAKAYLDLSV
CIERPRFEYSPAHTYALVDMANAGKLLMPRGLFVQVASGRTGATGAGSAG
GGAGVPPLAWWDTGRCMVHGKFDATVFGGTCHSSHGGGDGGGGGGTTAAA
FAAAAVGSVAGPSPGSASISSSSGTRLSWKPSAATLRRDRGGSGGLHRGG
GGGGSGGGGSGGGGSGGGGGGSGGGGNGGGGSGGGSGGLSGSAEEGAGET
RGRFRSSSSWGHRSGSGSCGGSRHRAPGSSGVGGGAGVLNELQEGKVLAV
TIAVLRVGWAGAGRVALEVTGFGFEASPSPAPGLPPFLELPTLRRGGGWC
TISVSWHTLGGPSPDHWVYVRPPAPGFLKPSPRTDGVDAAGTSAANASPV
GGGMGGPAVTAVAGKADRGGEGGAEGEGVGAAVRASLPNRPTGGAPPPLP
PGLPLPQALVSDLSCLPPRMTVSVFGCCLGWAVEWGTCFSKVPPVPVPRL
RCRPPSSRLVGGNGSSGRGWTGASGGVITRRSSSDASVFSRLMRDAQGSP
AKALSEQAAGGGPSIGCDDRHRVARRVSTTPSEGFADLVRGLRLGPLCLS
EVDVSVYDKAPADLGKRGVRLSIRGGVAVSLCFSVEKSGAINPFTTGR
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