prot_L-digitata_M_contig99578.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99578.1.1
Unique Nameprot_L-digitata_M_contig99578.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length221
Homology
BLAST of mRNA_L-digitata_M_contig99578.1.1 vs. uniprot
Match: A0A2E8XSY2_9PROT (Glycine cleavage system protein T n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XSY2_9PROT)

HSP 1 Score: 254 bits (648), Expect = 1.320e-81
Identity = 125/221 (56.56%), Postives = 156/221 (70.59%), Query Frame = 0
Query:    1 MPITYTKLSRDIVEISGTDQRNFLQGLISQDIEKVTSENCVYGTLLTPQGKFLHDFIILQKDDLLVFDCEQGRSADLISRLSRFKLRADVHLESHPETMVYAVFGDGAAERVGIDQTVGATMLVGDVLLSVDPRTEDLGCRLIGPEASIIKFLQDHDIPEVAFDAYDQRRIARGVPDGTRDLEVEKSILLESNIDELHGIDWEKGCYMGQELTARTKYRGL 221
            M  ++  L R +V I G D R FLQGLISQDIE+V+  +  Y  LLTPQGK+LHDF++      L+ DCE GRS DLISRL RFKLRADV LE+  +  V AVFG  A+  +G+ +T GA    GD+++  DPR   LGCR+IGPE     + ++H+I E  F+ YD  RIA  VPDG+RD+E+EKS LLESN + L+GIDW+KGCYMGQELTARTKYRGL
Sbjct:    1 MSASFAILPRYVVAIRGADSRGFLQGLISQDIERVSDTSAAYSALLTPQGKYLHDFLVCASGAELLLDCEAGRSDDLISRLLRFKLRADVTLEARSDLSVLAVFGAHASATLGLSETPGAASNAGDLIIFTDPRLASLGCRIIGPEQQARAYAENHEIRETGFEDYDAHRIALEVPDGSRDMEIEKSTLLESNFEPLNGIDWDKGCYMGQELTARTKYRGL 221          
BLAST of mRNA_L-digitata_M_contig99578.1.1 vs. uniprot
Match: A0A2E7PGR4_9PROT (Glycine cleavage system protein T n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PGR4_9PROT)

HSP 1 Score: 246 bits (629), Expect = 9.400e-79
Identity = 121/221 (54.75%), Postives = 153/221 (69.23%), Query Frame = 0
Query:    1 MPITYTKLSRDIVEISGTDQRNFLQGLISQDIEKVTSENCVYGTLLTPQGKFLHDFIILQKDDLLVFDCEQGRSADLISRLSRFKLRADVHLESHPETMVYAVFGDGAAERVGIDQTVGATMLVGDVLLSVDPRTEDLGCRLIGPEASIIKFLQDHDIPEVAFDAYDQRRIARGVPDGTRDLEVEKSILLESNIDELHGIDWEKGCYMGQELTARTKYRGL 221
            M  +Y +L RD+V ++G D R+FLQGL+SQD+E+V+    VY  LLTPQGK+LHDF ++     L  DCE GR+ DLI RLSRF+LRAD   E+  +  V+AVFG  A + +G+D   G T ++ D L   DPR   LGCRL+G + S+   L    IPE  F  YD  RI+  +PDG+RD+EVEKS LLESN D L+GIDWEKGCY+GQELTARTKYRGL
Sbjct:    1 MSASYVQLPRDVVALNGADCRSFLQGLVSQDMERVSETMSVYSALLTPQGKYLHDFFVMTDGARLWIDCEAGRADDLIQRLSRFRLRADAQFENSEDMAVFAVFGPEAPKAMGLDANPGFTRVIADTLAYTDPRDVALGCRLLGNQLSVEAVLNSRGIPETDFTHYDALRISLEIPDGSRDMEVEKSTLLESNFDRLNGIDWEKGCYIGQELTARTKYRGL 221          
BLAST of mRNA_L-digitata_M_contig99578.1.1 vs. uniprot
Match: A0A2E3XFN7_9PROT (Glycine cleavage system protein T n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3XFN7_9PROT)

HSP 1 Score: 241 bits (616), Expect = 1.120e-76
Identity = 121/222 (54.50%), Postives = 158/222 (71.17%), Query Frame = 0
Query:    1 MPIT-YTKLSRDIVEISGTDQRNFLQGLISQDIEKVTSENCVYGTLLTPQGKFLHDFIILQKDDLLVFDCEQGRSADLISRLSRFKLRADVHLESHPETMVYAVFGDGAAERVGIDQTVGATMLVGDVLLSVDPRTEDLGCRLIGPEASIIKFLQDHDIPEVAFDAYDQRRIARGVPDGTRDLEVEKSILLESNIDELHGIDWEKGCYMGQELTARTKYRGL 221
            MP T YTKL R +V ISG+D   FLQGLISQ++ KVT +   Y  LLTPQGKFLHDF I +  + L+ DCEQGR  +LIS +S+FKLRA V L+   E  V++VFGD A++ + +   +GA+  + + +  VDPR   LGCR+I PE+  I+ L+D  I E  F  YD  R++  +PDGT+DL V KS+LLE+N DELHGIDWEKGCY+GQE+TAR+K+RGL
Sbjct:    1 MPNTKYTKLPRGLVVISGSDSNTFLQGLISQNVNKVTQKKAAYSALLTPQGKFLHDFCISKIGNNLILDCEQGREEELISNISKFKLRAKVELKHEKELSVFSVFGDEASQSLHLSNILGASREIKNGIAFVDPRKIGLGCRIIAPESDTIELLEDLSIKEGTFIEYDTIRLSLCIPDGTKDLLVNKSVLLEANFDELHGIDWEKGCYIGQEVTARSKFRGL 222          
BLAST of mRNA_L-digitata_M_contig99578.1.1 vs. uniprot
Match: A0A2E7I591_9PROT (GCV_T domain-containing protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I591_9PROT)

HSP 1 Score: 232 bits (591), Expect = 1.180e-72
Identity = 113/221 (51.13%), Postives = 149/221 (67.42%), Query Frame = 0
Query:    1 MPITYTKLSRDIVEISGTDQRNFLQGLISQDIEKVTSENCVYGTLLTPQGKFLHDFIILQKDDLLVFDCEQGRSADLISRLSRFKLRADVHLESHPETMVYAVFGDGAAERVGIDQTVGATMLVGDVLLSVDPRTEDLGCRLIGPEASIIKFLQDHDIPEVAFDAYDQRRIARGVPDGTRDLEVEKSILLESNIDELHGIDWEKGCYMGQELTARTKYRGL 221
            MP  Y  L RD++ + G D ++FLQGL+SQD+E+VT    VY  LLTPQGKFLHDF +++  D +  DCE  R  DLI RLS F+LR+DV  E   +  V AV G  A   +G+  T G T    ++L   DPR   +GCR++GP ++I   + +++I    F+ YD  RI+  +PDG+RD+E+EKS LLESN  +L+GIDWEKGCYMGQELTARTKYRGL
Sbjct:   17 MPNFYVPLPRDVIALDGIDAQSFLQGLVSQDMEQVTKTRSVYTALLTPQGKFLHDFFVMRSGDRMWLDCEAKRGPDLIERLSAFRLRSDVQFEILHKHAVCAVIGPTANSTLGLTTTAGDTRPATEMLAYTDPRNPAIGCRVVGPNSTIKALMAEYEISAGGFETYDTLRISLEIPDGSRDMEIEKSTLLESNFADLNGIDWEKGCYMGQELTARTKYRGL 237          
BLAST of mRNA_L-digitata_M_contig99578.1.1 vs. uniprot
Match: A0A4R3JC12_9PROT (GCV_T domain-containing protein n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3JC12_9PROT)

HSP 1 Score: 224 bits (570), Expect = 1.510e-69
Identity = 110/213 (51.64%), Postives = 143/213 (67.14%), Query Frame = 0
Query:   10 RDIVEISGTDQRNFLQGLISQDIEKVTSENCVYGTLLTPQGKFLHDFIILQKDDLLVFDCEQGRSADLISRLSRFKLRADVHLESHPETMVYAV-FGDGAAERVGIDQTVGATMLVGDVLLSVDPRTEDLGCRLIGPEASIIKFLQDHDIPEVAFDAYDQRRIARGVPDGTRDLEVEKSILLESNIDELHGIDWEKGCYMGQELTARTKYRGL 221
            R ++ + G D  +FLQGL+S D+  V+ +N ++   LTPQGK+LHDF I Q D  L+ DC+ GR  DL+ RLS +KLRADV L    +     V  G  A+  + +++ VGAT+ + D +  VDPR   LGCR+I P+ ++   L D  IP   FD Y+  RI+ G+PDG RDL VEKSILLE+  DELHGIDW+KGCYMGQELTARTKYRGL
Sbjct:   25 RGVIGLEGPDAADFLQGLVSNDVSHVSPQNAIWAAFLTPQGKYLHDFFIAQNDARLLIDCDAGRLGDLLRRLSMYKLRADVTLSDLSDRFAVGVGIGAAASAILNLNEDVGATIAMNDAIAFVDPRHRQLGCRIIAPKTNL-NILNDAGIPSGKFDDYETLRISLGIPDGPRDLRVEKSILLENGFDELHGIDWDKGCYMGQELTARTKYRGL 236          
BLAST of mRNA_L-digitata_M_contig99578.1.1 vs. uniprot
Match: A0A848W880_9PROT (Folate-binding protein YgfZ n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W880_9PROT)

HSP 1 Score: 221 bits (563), Expect = 9.720e-69
Identity = 110/217 (50.69%), Postives = 143/217 (65.90%), Query Frame = 0
Query:    5 YTKLSRDIVEISGTDQRNFLQGLISQDIEKVTSENCVYGTLLTPQGKFLHDFIILQKDDLLVFDCEQGRSADLISRLSRFKLRADVHLESHPETMVYAVFGDGAAERVGIDQTVGATMLVGDVLLSVDPRTEDLGCRLIGPEASIIKFLQDHDIPEVAFDAYDQRRIARGVPDGTRDLEVEKSILLESNIDELHGIDWEKGCYMGQELTARTKYRGL 221
            + +L R +V ++G D R FLQGLISQ+I+ V+     YG  LTPQGK+LHDF + +  D ++ D E  R  +LI+RL RFKLRA V L S  +  V+AVFG  A   + +  T GA   +G+ +  VDPR+  LGCRLI P A     L +  I E   + Y+  RI   +PDGTRD++VEKS LLESN + L+GIDWEKGCY+GQE+TARTKYRGL
Sbjct:    6 FVRLDRGLVSVTGADSRTFLQGLISQNIDAVSPTQAAYGAFLTPQGKYLHDFCLAEIGDRIILDGEHARDDELIARLKRFKLRAKVELVSADDLAVFAVFGQDATNALELPDTPGAARQIGNGVAFVDPRSAALGCRLILPTADAAAILAELSITEAPLEDYETLRIRYAIPDGTRDMDVEKSTLLESNFEALNGIDWEKGCYIGQEVTARTKYRGL 222          
BLAST of mRNA_L-digitata_M_contig99578.1.1 vs. uniprot
Match: A0A2S6TMT4_9PROT (tRNA-modifying protein YgfZ n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6TMT4_9PROT)

HSP 1 Score: 215 bits (548), Expect = 2.900e-66
Identity = 111/222 (50.00%), Postives = 144/222 (64.86%), Query Frame = 0
Query:    2 PITYTKLS-RDIVEISGTDQRNFLQGLISQDIEKVTSENCVYGTLLTPQGKFLHDFIILQKDDLLVFDCEQGRSADLISRLSRFKLRADVHLESHP-ETMVYAVFGDGAAERVGIDQTVGATMLVGDVLLSVDPRTEDLGCRLIGPEASIIKFLQDHDIPEVAFDAYDQRRIARGVPDGTRDLEVEKSILLESNIDELHGIDWEKGCYMGQELTARTKYRGL 221
            P  YT L  R ++ + G D+  FLQGL+S DIEKV ++  VY  LLTPQGK+LHDF +++ DD L+ DCE+ R  +L  RLS FKLRADV L+    E  V  ++GDGA + +G+    G+    G  +  +DPR +D G R + P     K L+D          YD+ R+  G+PDG+RDL VEKS LLES  DEL+G+DW+KGCYMGQELTARTKYRGL
Sbjct:    4 PPRYTLLEDRGLLSVGGVDRVTFLQGLVSNDIEKVGAKRAVYAALLTPQGKYLHDFFVVRLDDALLLDCERARLDNLKKRLSMFKLRADVTLDDRSGELRVATLYGDGAGDALGLSGDAGSAGAFGGGIAFIDPRLKDAGARAVLPLEGAAKTLEDAGFKATDAPEYDRLRLQLGLPDGSRDLVVEKSTLLESGFDELNGVDWDKGCYMGQELTARTKYRGL 225          
BLAST of mRNA_L-digitata_M_contig99578.1.1 vs. uniprot
Match: A0A2E4Y130_9PROT (Glycine cleavage system protein T n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4Y130_9PROT)

HSP 1 Score: 213 bits (543), Expect = 1.550e-65
Identity = 104/212 (49.06%), Postives = 143/212 (67.45%), Query Frame = 0
Query:   10 RDIVEISGTDQRNFLQGLISQDIEKVTSENCVYGTLLTPQGKFLHDFIILQKDDLLVFDCEQGRSADLISRLSRFKLRADVHLESHPETMVYAVFGDGAAERVGIDQTVGATMLVGDVLLSVDPRTEDLGCRLIGPEASIIKFLQDHDIPEVAFDAYDQRRIARGVPDGTRDLEVEKSILLESNIDELHGIDWEKGCYMGQELTARTKYRGL 221
            R ++ + G D+R+FLQGLIS DIE+      ++  LLT QGK+LHDF I++ DD+   DCE  R  DL  RLSRFKLRA++ L    +  V+A++G  A   +G+D   G      D ++  DPRT ++GCR I P+ S ++ L+  D+       YD++RIA G PDG+RD+ +EK+ILLE+N D L+G+DWEKGCY+GQELTARTKYRGL
Sbjct:   12 RGLITVGGPDRRDFLQGLISNDIEQAGPGQAIWAALLTAQGKYLHDFFIIEIDDVFYIDCEAARLMDLGQRLSRFKLRAEIDLGIAEDYGVWALYGTDAGAAMGLDVQPGRGTAWNDGVVYYDPRTTEVGCRAILPKTSAVETLESADLASGHLAEYDKQRIALGAPDGSRDMVIEKAILLENNFDPLNGVDWEKGCYVGQELTARTKYRGL 223          
BLAST of mRNA_L-digitata_M_contig99578.1.1 vs. uniprot
Match: A0A2E6QC00_9PROT (Glycine cleavage system protein T n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QC00_9PROT)

HSP 1 Score: 212 bits (539), Expect = 5.220e-65
Identity = 103/212 (48.58%), Postives = 139/212 (65.57%), Query Frame = 0
Query:   10 RDIVEISGTDQRNFLQGLISQDIEKVTSENCVYGTLLTPQGKFLHDFIILQKDDLLVFDCEQGRSADLISRLSRFKLRADVHLESHPETMVYAVFGDGAAERVGIDQTVGATMLVGDVLLSVDPRTEDLGCRLIGPEASIIKFLQDHDIPEVAFDAYDQRRIARGVPDGTRDLEVEKSILLESNIDELHGIDWEKGCYMGQELTARTKYRGL 221
            R ++ + G D+  FLQGLIS DI  V S+  ++  LLTPQGK+LHDF + + D   + DCE  R  DL  RLS +KLRA++ L       V A++GDG  E +G+    GA +  G  +  +DPR   +G R + P+ +  + L D  +   + +AYD  R+A G+PDG+RDL +EKSILLESN DEL+G+DW+KGCYMGQELTARTKYRGL
Sbjct:   10 RGLITVGGPDRAEFLQGLISNDINHVASDRVIWAALLTPQGKYLHDFFVTESDGSYLLDCEAERLMDLGQRLSHYKLRAEIDLGMSDSQSVAAIYGDGIEELLGLPAKAGAAVPFGGGVAYMDPRLIQMGARAVLPKETAEEALSDAGLSADSLEAYDAHRLALGLPDGSRDLVIEKSILLESNFDELNGVDWDKGCYMGQELTARTKYRGL 221          
BLAST of mRNA_L-digitata_M_contig99578.1.1 vs. uniprot
Match: A0A537S9E7_9PROT (Folate-binding protein YgfZ n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S9E7_9PROT)

HSP 1 Score: 212 bits (539), Expect = 5.700e-65
Identity = 109/212 (51.42%), Postives = 141/212 (66.51%), Query Frame = 0
Query:   10 RDIVEISGTDQRNFLQGLISQDIEKVTSENCVYGTLLTPQGKFLHDFIILQKDDLLVFDCEQGRSADLISRLSRFKLRADVHLESHPETMVYAVFGDGAAERVGIDQTVGATMLVGDVLLSVDPRTEDLGCRLIGPEASIIKFLQDHDIPEVAFDAYDQRRIARGVPDGTRDLEVEKSILLESNIDELHGIDWEKGCYMGQELTARTKYRGL 221
            R I+ +SG D+  FLQGL+S D+EKV  +  VY  LLT QGK+LHDFI+    D +  D E  R ADL  RLS ++LRA V ++   +  V AVFG+GA E +G+ +  GA     + L  VDPR   LG R+I P   I   L++  + E  F  YD+ R+A G+PDG+RDL +EKSILLES  DEL+G+DW+KGCY+GQELTARTKYRGL
Sbjct:   12 RGILAVSGPDRLIFLQGLVSNDVEKVAPDRAVYAALLTAQGKYLHDFIMAAAGDAIWLDAEAARLADLKRRLSMYRLRAKVAIDDLADLAVAAVFGEGAREALGLPEQAGAARPFREGLAFVDPRLAALGARVILPRDQIRGSLENAGLAETDFAGYDRHRLALGIPDGSRDLVLEKSILLESGFDELNGVDWQKGCYVGQELTARTKYRGL 223          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99578.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8XSY2_9PROT1.320e-8156.56Glycine cleavage system protein T n=1 Tax=Alphapro... [more]
A0A2E7PGR4_9PROT9.400e-7954.75Glycine cleavage system protein T n=1 Tax=Rhodospi... [more]
A0A2E3XFN7_9PROT1.120e-7654.50Glycine cleavage system protein T n=1 Tax=Rhodospi... [more]
A0A2E7I591_9PROT1.180e-7251.13GCV_T domain-containing protein n=2 Tax=Alphaprote... [more]
A0A4R3JC12_9PROT1.510e-6951.64GCV_T domain-containing protein n=1 Tax=Varunaivib... [more]
A0A848W880_9PROT9.720e-6950.69Folate-binding protein YgfZ n=1 Tax=Alphaproteobac... [more]
A0A2S6TMT4_9PROT2.900e-6650.00tRNA-modifying protein YgfZ n=2 Tax=Alphaproteobac... [more]
A0A2E4Y130_9PROT1.550e-6549.06Glycine cleavage system protein T n=1 Tax=Rhodospi... [more]
A0A2E6QC00_9PROT5.220e-6548.58Glycine cleavage system protein T n=1 Tax=Rhodospi... [more]
A0A537S9E7_9PROT5.700e-6551.42Folate-binding protein YgfZ n=1 Tax=Alphaproteobac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027266GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1GENE3D3.30.1360.120Probable tRNA modification gtpase trme; domain 1coord: 1..221
e-value: 7.3E-43
score: 149.0
IPR017703YgfZ/GcvT conserved siteTIGRFAMTIGR03317TIGR03317coord: 165..220
e-value: 6.3E-20
score: 68.9
IPR006222Aminomethyltransferase, folate-binding domainPFAMPF01571GCV_Tcoord: 12..110
e-value: 4.7E-7
score: 29.3
IPR045179YgfZ/GcvTPANTHERPTHR22602UNCHARACTERIZEDcoord: 9..220
NoneNo IPR availableSUPERFAMILY103025Folate-binding domaincoord: 9..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99578contigL-digitata_M_contig99578:1..663 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99578.1.1mRNA_L-digitata_M_contig99578.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99578 1..681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99578.1.1 ID=prot_L-digitata_M_contig99578.1.1|Name=mRNA_L-digitata_M_contig99578.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=221bp
MPITYTKLSRDIVEISGTDQRNFLQGLISQDIEKVTSENCVYGTLLTPQG
KFLHDFIILQKDDLLVFDCEQGRSADLISRLSRFKLRADVHLESHPETMV
YAVFGDGAAERVGIDQTVGATMLVGDVLLSVDPRTEDLGCRLIGPEASII
KFLQDHDIPEVAFDAYDQRRIARGVPDGTRDLEVEKSILLESNIDELHGI
DWEKGCYMGQELTARTKYRGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027266TrmE/GcvT_dom1
IPR017703YgfZ/GcvT_CS
IPR006222GCV_T_N
IPR045179YgfZ/GcvT