prot_L-digitata_M_contig99495.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99495.1.1
Unique Nameprot_L-digitata_M_contig99495.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length67
Homology
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BLAST of mRNA_L-digitata_M_contig99495.1.1 vs. uniprot
Match: D7FV23_ECTSI (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV23_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 8.150e-14
Identity = 38/54 (70.37%), Postives = 39/54 (72.22%), Query Frame = 0 
Query:    4 SNFDCDYAFTLGGAVATLMSRRMNGYLATVTGLKMPAADWKVRARMHTSSLTND 57
            SNFDCDYAFTLGGAVA LM RRM+GYLATVTGLK P   WK      TS L  D
Sbjct:  977 SNFDCDYAFTLGGAVAILMHRRMSGYLATVTGLKEPVEGWKGGGVPLTSLLGAD 1030
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BLAST of mRNA_L-digitata_M_contig99495.1.1 vs. uniprot
Match: A0A835YX68_9STRA (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX68_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.790e-9
Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 0 
Query:    4 SNFDCDYAFTLGGAVATLMSRRMNGYLATVTGLKMPAADWKVRARMHTSSLTNDGL 59
            SNFDCDYAF+LGG  A+L+     GYLAT+TGLK  A+ W+      TS L +D +
Sbjct: 1017 SNFDCDYAFSLGGLAASLVHSGATGYLATLTGLKGDASTWQAGGVPFTSMLVDDNM 1072
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BLAST of mRNA_L-digitata_M_contig99495.1.1 vs. uniprot
Match: A0A836C8A1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8A1_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.860e-7
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0 
Query:    4 SNFDCDYAFTLGGAVATLMSRRMNGYLATVTGLK 37
            SNFDCDYAF+LGG  A L+  R +GYLAT+TGLK
Sbjct:   21 SNFDCDYAFSLGGLAAALVHSRASGYLATLTGLK 54
[Close]
BLAST of mRNA_L-digitata_M_contig99495.1.1 vs. uniprot
Match: A0A7S0A747_9DINO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase n=2 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A747_9DINO)

HSP 1 Score: 48.5 bits (114), Expect = 7.500e-5
Identity = 22/51 (43.14%), Postives = 31/51 (60.78%), Query Frame = 0 
Query:    4 SNFDCDYAFTLGGAVATLMSRRMNGYLATVTGLKMPAADWKVRARMHTSSL 54
            S+FD DYA++LGGA A L +    GY+A V+ L  P  +W+V     T+ L
Sbjct: 1018 SDFDSDYAYSLGGAAAVLATTGRTGYMAVVSDLSRPVREWRVGGAPLTAML 1068
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99495.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FV23_ECTSI8.150e-1470.37Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
A0A835YX68_9STRA1.790e-951.79Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
A0A836C8A1_9STRA2.860e-770.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0A747_9DINO7.500e-543.14Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.450coord: 1..56
e-value: 1.1E-6
score: 29.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99495contigL-digitata_M_contig99495:99..299 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99495.1.1mRNA_L-digitata_M_contig99495.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99495 99..299 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99495.1.1 ID=prot_L-digitata_M_contig99495.1.1|Name=mRNA_L-digitata_M_contig99495.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=67bp
MVCSNFDCDYAFTLGGAVATLMSRRMNGYLATVTGLKMPAADWKVRARMH
TSSLTNDGLVFFLSSL*
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