prot_L-digitata_M_contig99254.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99254.1.1
Unique Nameprot_L-digitata_M_contig99254.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length284
Homology
BLAST of mRNA_L-digitata_M_contig99254.1.1 vs. uniprot
Match: A0A1V0DHM2_9BACT (UmuC domain-containing protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V0DHM2_9BACT)

HSP 1 Score: 217 bits (553), Expect = 1.080e-64
Identity = 115/279 (41.22%), Postives = 169/279 (60.57%), Query Frame = 0
Query:    1 SVGIGPTKTLSKAANYCSKIEAHRNGVFAPASHEWDQLLDEIPVKRVWGIGYRWAKKMERLKIHTAKTLRDADDLAIKKKFNVVAQRIVLELRGIKCIELDDISQDRKNAACTRSFGTPLTDIKDIRKAVAFFCATLGTRIRADKQLTSQLSVFLSTGRFGKSVRYQRSHSMLLPEPSNHTPMLSKYAFAALDEIFKPGLRYKQAGVFLSGLIDDSGQQFDLFTDRNHVKESSLMEALDSINHRYGRGKIKMAAEGTDPKWVMKQAWRSDKYTTRWDEL 279
            S+G+GPTKTL+K AN  +K  A  +GV    +   D LL  +PV+ VWGIG R+A +++   + TA+ LRDADD  I++   VV  R V ELRG  C+ L+ +   RK   C+RSFGTP  D+  IR+AV  F A +G ++R    + + +SVFL+T   G    Y    +  L  P+++TP L + A A L+ I++PG  Y++AGV ++G+     +Q DLF      ++S+LM+ +D+IN R+GRG +   A G D  W M Q  RS ++TTRW+EL
Sbjct:  134 SIGLGPTKTLAKIANRFAKRHAP-HGVCCLTARNADALLARVPVEDVWGIGPRYAARLQAHGLRTARDLRDADDRWIRQHLTVVGLRTVWELRGRSCLPLEQVRPPRKAILCSRSFGTPQRDLAGIREAVTAFAARVGEKLRRQGSVAAVVSVFLTTKDHGPGPSYSNRATTTLSIPTSYTPDLIRAAHAGLERIYRPGFAYRKAGVMVTGIQPAPDRQGDLFAAPPAPEQSALMDTIDAINRRWGRGTLCFGASGLDRPWQMNQQRRSPRFTTRWNEL 411          
BLAST of mRNA_L-digitata_M_contig99254.1.1 vs. uniprot
Match: A0A7V0X1A7_9SPIR (Y-family DNA polymerase n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A7V0X1A7_9SPIR)

HSP 1 Score: 214 bits (546), Expect = 1.430e-63
Identity = 115/285 (40.35%), Postives = 166/285 (58.25%), Query Frame = 0
Query:    1 SVGIGPTKTLSKAANYCSKIEAHRNGVFAPASHEW-DQLLDEIPVKRVWGIGYRWAKKMERLKIHTAKTLRDADDLAIKKKFNVVAQRIVLELRGIKCIELDDISQDRKNAACTRSFGTPLTDIKDIRKAVAFFCATLGTRIRADKQLTSQLSVFLSTGRFGKS-VRYQRSHSMLLPEPSNHTPMLSKYAFAALDEIFKPGLRYKQAGVFLSGLIDDSGQQFDLF-TDRNHVKESSLMEALDSINHRYGRGKIKMAAEGTDPKWVMKQAWRSDKYTTRWDELKTV 282
            S+G+GP+KTL+K AN  +K +    GVF+  +H + D+LLD + V+ VWGIG ++ K +    I TA+ LRDA D  +KK   +V  R+V ELRGI C+ L++    +K  ACTRSFG  +   +++R+AVAFF      ++RA     + L VF++T RF     +Y  + ++ L  P+ +TP L + A   LD +++PG RY+QAGV LSG+      Q  LF T     K   LME +D +N   GR  ++  AEG    W M+Q   S +YTTRW EL  V
Sbjct:  138 SIGLGPSKTLAKLANKIAKRDGQHGGVFSIINHPFADELLDTVKVEDVWGIGRQYGKLLNNAGISTARRLRDAPDRWVKKHLTIVGLRLVWELRGISCVSLEEAPPPKKAIACTRSFGRHVESAEELREAVAFFTTRAAEKLRAQGSAAACLQVFIATDRFRPGDPQYADAVTLKLSRPTAYTPELIRRALRCLDTLYRPGYRYRQAGVILSGITSLGDVQPGLFDTPGRETKRRELMETVDRVNRTMGRDTVRCGAEGVRKPWGMRQRKLSPRYTTRWSELPAV 422          
BLAST of mRNA_L-digitata_M_contig99254.1.1 vs. uniprot
Match: K8P3R9_9BRAD (DNA-directed DNA polymerase n=1 Tax=Afipia clevelandensis ATCC 49720 TaxID=883079 RepID=K8P3R9_9BRAD)

HSP 1 Score: 212 bits (540), Expect = 1.040e-62
Identity = 117/284 (41.20%), Postives = 175/284 (61.62%), Query Frame = 0
Query:    1 SVGIGPTKTLSKAANYCSKIEAHRNGVFAP-ASHEWDQLLDEIPVKRVWGIGYRWAKKMERLKIHTAKTLRDADDLAIKKKFNVVAQRIVLELRGIKCIELDDISQDRKNAACTRSFGTPLTDIKDIRKAVAFFCATLGTRIRADKQLTSQLSVFLSTGRFGKS-VRYQRSHSMLLPEPSNHTPMLSKYAFAALDEIFKPGLRYKQAGVFLSGLIDDSGQQFDLFTDRNHVKESSLMEALDSINHRYGRGKIKMAAEGTDPKWVMKQAWRSDKYTTRWDELKTV 282
            SVGI PTKTL+K AN  +K +A R GV+    + E +  L  + +  +WG+  R A+++E + I +   LRDAD   I+++FNVV QR+VLELRG+ CIEL+D   DRK+   +RSFG P+T ++++++AVA + A    ++R     T+ +SVF+ T RF  +  +Y  S ++ LP  +  T +LSK A   +  I+K G RYK+AGV L  L   S  Q DL+T+ ++ +  SLM+ALD +N  YGRG +  A+ G    W +++   S +YTT WDEL  V
Sbjct:  137 SVGIAPTKTLAKVANRFAKKDADRAGVYVMNEATEIEHTLSRMALTDLWGVAGRMAQRLEEIGITSPLKLRDADPTFIRERFNVVMQRMVLELRGVPCIELEDHIPDRKSIIASRSFGRPVTTLQEMQEAVASYAARAAEKMRRQGLATAHVSVFVETNRFRPTDPQYNVSRAIRLPVATADTAVLSKAANRVIRAIYKSGFRYKKAGVMLLDLAPASRVQGDLWTEPDNARSKSLMKALDGLNAHYGRGTLTYASAGRQQAWKLRRDHISPRYTTSWDELLRV 420          
BLAST of mRNA_L-digitata_M_contig99254.1.1 vs. uniprot
Match: A0A7V7T2G1_9PROT (Y-family DNA polymerase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A7V7T2G1_9PROT)

HSP 1 Score: 208 bits (530), Expect = 3.210e-61
Identity = 114/285 (40.00%), Postives = 170/285 (59.65%), Query Frame = 0
Query:    2 VGIGPTKTLSKAANYCSKIEAHRNGVFAPASHEW--DQLLDEIPVKRVWGIGYRWAKKMERLKIHTAKTLRDADDLAIKKKFNVVAQRIVLELRGIKCIELDDISQDRKNAACTRSFGTPLTDIKDIRKAVAFFCATLGTRIRADKQLTSQLSVFLSTGRFGKSVR-YQRSHSMLLPEPSNHTPMLSKYAFAALDEIFKPGLRYKQAGVFLSGLIDDSGQQFDLFT-DRNHVKESSLMEALDSINHRYGRGKIKMAAEGTDPKWVMKQAWRSDKYTTRWDELKTV 282
            VG+ P+KTL+K AN+ +K + + +G     SHE+   Q L+ +PV  +WGIG R ++++  + IHTA  LR+AD   ++K+F+VV +R +LELRG+ CI+ D     +K   CTRSF    +D + I++AVA+        +R  + +   L+VF+ T RF  + R Y  S ++ LP+ S+ T      A  AL +I+KPG  YK+AG+ L+ L D    Q DLF+ D N  K S LM  LD IN R+G+GK++ A EG   +W MK   +S  +TTRWD L  +
Sbjct:  136 VGLAPSKTLAKVANHYAK-KLNIDGRVLNLSHEYYIKQALEHLPVNELWGIGRRLSEQLRHMGIHTALELRNADIKTMRKRFSVVMERTILELRGVSCIDFDADPDKKKQLICTRSFANKSSDFELIKQAVAYHVTRACVSLRQQESVAQCLTVFIKTNRFCPNDRQYSNSITIQLPQASDFTGHFLTAASHALKKIYKPGYLYKKAGIMLTNLSDKGALQTDLFSPDINSPKNSQLMHTLDDINERFGKGKLRSAREGFTQQWAMKSERKSKAFTTRWDNLLNI 419          
BLAST of mRNA_L-digitata_M_contig99254.1.1 vs. uniprot
Match: UPI0003B5B243 (Y-family DNA polymerase n=1 Tax=Leucothrix mucor TaxID=45248 RepID=UPI0003B5B243)

HSP 1 Score: 206 bits (525), Expect = 2.400e-60
Identity = 116/287 (40.42%), Postives = 169/287 (58.89%), Query Frame = 0
Query:    1 SVGIGPTKTLSKAANYCSKIEAHRNGVFAPA-SHEWDQLLDEIPVKRVWGIGYRWAKKMERLKIHTAKTLRDADDLAIKKKFNVVAQRIVLELRGIKCIELDDISQDRKNAACTRSFGTPLTDIKDIRKAVAFFCATLGTRIRADKQLTSQLSVFLSTGRFGKSVR-YQRSHSMLLPEPSNHTPMLSKYAFAALDEIFKPGLRYKQAGVFLSGLIDDSGQQFDLFTDRNHVKESS-LMEALDSINHRYGRGKIKMAAEGTDPK--WVMKQAWRSDKYTTRWDELKTV 282
            S+G G TKTL+K AN  SK +A  NGVF  A + + D +L ++ V  VWG+G RWA+K+E+  I+TA  L+  D   I+K+FNVV  R V EL+ + CIEL+++  DR+   C+RSFG  +T+ +D+R A+  F      ++RA   L S +SV LST  F +    Y  + +  L  P + T  L+  A   L  I+  G  Y++AGV L  L+     Q DLF +    + S+ LM+ LD+IN + G+G ++ A EG D K  W MKQ  RS +YTT++ EL+ V
Sbjct:  145 SIGFGSTKTLAKLANRVSKKQADLNGVFNFADAQDQDAVLSQVAVGEVWGVGRRWAQKLEQQGIYTALDLKRCDAGMIRKRFNVVLARTVQELQSVSCIELEEVRADRQQVLCSRSFGVRVTEFQDMRSAITHFVTRAAEKLRAQSLLASAISVHLSTSPFDERGEFYSNAATQRLTTPCDATHELTAVAQELLKRIYVSGHSYQRAGVLLMNLVSPRFAQADLFAETAQAQHSAALMKTLDAINSKMGKGALRFAGEGVDEKAGWRMKQQLRSPRYTTQYSELRVV 431          
BLAST of mRNA_L-digitata_M_contig99254.1.1 vs. uniprot
Match: UPI001ACFAFBA (Protein UmuC n=1 Tax=Methylococcales bacterium TaxID=2304002 RepID=UPI001ACFAFBA)

HSP 1 Score: 205 bits (522), Expect = 5.780e-60
Identity = 113/285 (39.65%), Postives = 170/285 (59.65%), Query Frame = 0
Query:    2 VGIGPTKTLSKAANYCSKIEAHRNGVF---APASHEWDQLLDEIPVKRVWGIGYRWAKKMERLKIHTAKTLRDADDLAIKKKFNVVAQRIVLELRGIKCIELDDISQDRKNAACTRSFGTPLTDIKDIRKAVAFFCATLGTRIRADKQLTSQLSVFLSTGRFGKSV-RYQRSHSMLLPEPSNHTPMLSKYAFAALDEIFKPGLRYKQAGVFLSGLIDDSGQQFDLFT---DRNHVKESSLMEALDSINHRYGRGKIKMAAEGTDPKWVMKQAWRSDKYTTRWDEL 279
            VG G +KTL+K +N+ +K      GVF     ++ E D+LL  I    VWGIG R A+++ R  I T K LRDAD  A+++ F+VV +R VLELRG+ C+ L++++  +K    +RSFG  +TD+ ++R+AVA + A    ++R    + S L VFL T    +   +Y     + L EP++ T +L+  A   L++I+KPG RY++AGV L GL D    QFDLF+   +R       LM+ LD IN + GRG +++AAEG    W  + ++ S +YTTRW +L
Sbjct:  136 VGFGLSKTLAKLSNHVAKKRPQYQGVFDFSRLSAEEQDELLASIEAGEVWGIGRRLAERLARRGIVTVKDLRDADPKALRRGFSVVVERTVLELRGVSCLSLEEVASPKKEIISSRSFGQLVTDLGELRQAVASYTARAAEKLRRQHSVASALQVFLQTNPHKEGEPQYHPGIVVPLVEPTDDTRLLASQAVRGLEKIYKPGYRYQKAGVMLMGLADPQTAQFDLFSRSSERMAGPSKHLMQTLDQINAKLGRGTLRLAAEGLKQNWRPRASYPSPRYTTRWTDL 420          
BLAST of mRNA_L-digitata_M_contig99254.1.1 vs. uniprot
Match: A0A1H2EPT1_9PROT (DNA polymerase V n=3 Tax=Nitrosomonas ureae TaxID=44577 RepID=A0A1H2EPT1_9PROT)

HSP 1 Score: 205 bits (521), Expect = 7.750e-60
Identity = 113/288 (39.24%), Postives = 171/288 (59.38%), Query Frame = 0
Query:    2 VGIGPTKTLSKAANYCSKIEAHRNGV-----FAPASHEWDQLLDEIPVKRVWGIGYRWAKKMERLKIHTAKTLRDADDLAIKKKFNVVAQRIVLELRGIKCIELDDISQDRKNAACTRSFGTPLTDIKDIRKAVAFFCATLGTRIRADKQLTSQLSVFLSTGRFGK-SVRYQRSHSMLLPEPSNHTPMLSKYAFAALDEIFKPGLRYKQAGVFLSGLIDDSGQQFDLFTDR-NHVKESSLMEALDSINHRYGRGKIKMAAEGTDPKWVMKQAWRSDKYTTRWDELKTV 282
            VGIG TKTLSK AN+ +K  A+ NGV     F+P  H  D+ L  I V  VWGIG + A K+ +  I TA  L++++   ++++F+VV ++ + EL G+ CIEL++IS  +K    +RSFG  + D+K + ++V+   A    ++R  +     + VF++T RF K    Y  ++ + LP  S  T +L+K A   L +I++ G +Y +AGV LS  + +  +Q D+F  R    K   LM+ +D IN R G+G IK+A+EGTD  W MKQ  RS  YTT+WDEL  +
Sbjct:  137 VGIGGTKTLSKLANHVAKKNANFNGVCDLNAFSPTLH--DEWLSRIEVGEVWGIGRKLAPKLNKHGIKTALDLKNSNSKRLREEFSVVMEKTIRELNGVPCIELEEISPPKKQIISSRSFGITVKDLKSLEESVSSHIAKAAEKLRRQQSYAGAVHVFITTSRFNKPEENYHNTYKIKLPTQSADTILLTKAALWGLHKIYRSGYKYNKAGVMLSDFVTNENRQNDMFGLRLEDNKSKRLMKVMDQINARMGKGTIKLASEGTDQHWKMKQGSRSPGYTTQWDELVQI 422          
BLAST of mRNA_L-digitata_M_contig99254.1.1 vs. uniprot
Match: A0A7V7X3Z9_9BACT (Y-family DNA polymerase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V7X3Z9_9BACT)

HSP 1 Score: 205 bits (521), Expect = 8.140e-60
Identity = 105/284 (36.97%), Postives = 172/284 (60.56%), Query Frame = 0
Query:    1 SVGIGPTKTLSKAANYCSKIEAHRNGVFAPASH-EWDQLLDEIPVKRVWGIGYRWAKKMERLKIHTAKTLRDADDLAIKKKFNVVAQRIVLELRGIKCIELDDISQDRKNAACTRSFGTPLTDIKDIRKAVAFFCATLGTRIRADKQLTSQLSVFLSTGRFGKSVRYQRSHSMLLPEPSNHTPMLSKYAFAALDEIFKPGLRYKQAGVFLSGLIDDSGQQFDLFT-DRNHVKESSLMEALDSINHRYGRGKIKMAAEGTDPKWVMKQAWRSDKYTTRWDELKTV 282
            S+GIG TKTL+K AN  +K  +    VF   ++   D++L+++ V+ VWGIG   +K + R  +  A  L++  D  I+K   VV  R+V ELRGI C+ LD +   +K   C+RSFG P+T +  +++A++ +      ++RA   L   + V+++T  F     Y  + +  LP PS +T +L ++A   +++I+K G  YK+ GVFLSG++ D+  Q D+F  + + V+E  L+ A+D+IN+++G   I+ A+ G    W MKQA+RS ++TTRWDE+ TV
Sbjct:  141 SIGIGATKTLAKVANKTAKKNSALQSVFDLVNYPSVDEVLEKMQVENVWGIGRSLSKMLNRHGVLNALQLKNLPDTWIRKNMTVVGHRLVWELRGISCLPLDMVVPPKKGIMCSRSFGKPVTKLDGLKEALSTYTTRAAEKLRAQNSLAGLIMVYITTNPFNDMPYYSNAVTFSLPFPSANTAVLIRHAHQIMEKIYKDGYAYKKTGVFLSGIVPDNQMQRDMFVKEPDLVREKKLLRAVDAINYQFGSDTIQYASSGMIKPWRMKQAYRSPRFTTRWDEILTV 424          
BLAST of mRNA_L-digitata_M_contig99254.1.1 vs. uniprot
Match: A0A5C7KFT6_9GAMM (Y-family DNA polymerase n=1 Tax=Sinobacteraceae bacterium TaxID=1969813 RepID=A0A5C7KFT6_9GAMM)

HSP 1 Score: 203 bits (516), Expect = 4.290e-59
Identity = 114/286 (39.86%), Postives = 166/286 (58.04%), Query Frame = 0
Query:    2 VGIGPTKTLSKAANYCSKIEAHRNGVF---APASHEWDQLLDEIPVKRVWGIGYRWAKKMERLKIHTAKTLRDADDLAIKKKFNVVAQRIVLELRGIKCIELDDISQDRKNAACTRSFGTPLTDIKDIRKAVAFFCATLGTRIRADKQLTSQLSVFLSTGRFGKSVRY-QRSHSMLLPEPSNHTPMLSKYAFAALDEIFKPGLRYKQAGVFLSGLIDDSGQQFDLFTDRN-HVKESSLMEALDSINHRYGRGKIKMAAEGTDPKWVMKQAWRSDKYTTRWDELKTV 282
            VG G TK  +K AN+ +K      GVF   A    + D LL +IPV  VWG+G R A +++ + I +   LRDAD   I+ +F VV +RIVLELRG+ C+ L++    RK   C+RSFG+ +    ++R+AV  + A   T++RA K L   + VF++T  FG   RY  RS+++  P P++ T  L++ A AAL+ IF+ G RYK+AG  L  L     +Q  LF   +   +   L +A+DS+N RYGRG   +A  G   +W MK+   S  YTTRW+++ TV
Sbjct:  137 VGCGQTKVRAKLANHIAKTTPAHAGVFNLEALPDLQQDVLLGQIPVGEVWGVGPRTAPRLQSMGITSVAALRDADPKHIRSQFGVVLERIVLELRGVPCLSLEETRAPRKQILCSRSFGSDVVSKTELREAVLSYVANAATKLRAQKSLAGAVMVFIATSPFGAKDRYYSRSYTVAFPSPTDDTLALTRAAAAALEHIFRDGYRYKRAGAMLLDLSPAERRQATLFDGPDGDDRRERLNQAMDSVNARYGRGTAVVAVAGIHHRWGMKRTNLSPCYTTRWEDIVTV 422          
BLAST of mRNA_L-digitata_M_contig99254.1.1 vs. uniprot
Match: A0A6H9XTT5_9PROT (Y-family DNA polymerase n=1 Tax=Betaproteobacteria bacterium SCN2 TaxID=2651628 RepID=A0A6H9XTT5_9PROT)

HSP 1 Score: 202 bits (515), Expect = 5.620e-59
Identity = 109/286 (38.11%), Postives = 170/286 (59.44%), Query Frame = 0
Query:    2 VGIGPTKTLSKAANYCSKIE-AHRNGVF---APASHEWDQLLDEIPVKRVWGIGYRWAKKMERLKIHTAKTLRDADDLAIKKKFNVVAQRIVLELRGIKCIELDDISQDRKNAACTRSFGTPLTDIKDIRKAVAFFCATLGTRIRADKQLTSQLSVFLSTGRFG-KSVRYQRSHSMLLPEPSNHTPMLSKYAFAALDEIFKPGLRYKQAGVFLSGLIDDSGQQFDLFTDRNHVKESSLMEALDSINHRYGRGKIKMAAEGTDPKWVMKQAWRSDKYTTRWDELKTV 282
            VGI PTKTL+K AN+C+K + A  +GV    A +  E++ LL+ +PV  +WG+G +   ++  + I T K LRDAD   +++ F+VV +R +LELRG+ C+EL++++  +K    +RSFGT +T +  + +AVA + A    ++RA   +   + V++ T  F  K  +YQR+ ++ L E +N T  L++ A   L  IFKPG  Y++AGV L  +      Q  LF      + S LME +D  N  +G G +K+AAEG +  W MK+  +S  YT++WDEL  V
Sbjct:  136 VGIAPTKTLAKLANHCAKKDFAGSDGVCDFGALSKSEYEALLNSLPVAEIWGVGRKLTARLHDMGIRTVKALRDADARTLRENFSVVMERTILELRGVSCLELEEVAPAKKQIISSRSFGTYVTTLAGLEEAVATYIARAAEKLRAQDSVAGAVEVYIRTNPFSEKQPQYQRAIAVPLTEATNDTMRLTRAALWGLKRIFKPGYAYQKAGVMLMEIAPTGQVQGVLFGPSTSAR-SRLMEVIDEANALWGSGTLKLAAEGVEKSWQMKRGLKSPSYTSQWDELPRV 420          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99254.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1V0DHM2_9BACT1.080e-6441.22UmuC domain-containing protein n=2 Tax=Bacteroidet... [more]
A0A7V0X1A7_9SPIR1.430e-6340.35Y-family DNA polymerase n=1 Tax=Spirochaetes bacte... [more]
K8P3R9_9BRAD1.040e-6241.20DNA-directed DNA polymerase n=1 Tax=Afipia clevela... [more]
A0A7V7T2G1_9PROT3.210e-6140.00Y-family DNA polymerase n=2 Tax=Proteobacteria Tax... [more]
UPI0003B5B2432.400e-6040.42Y-family DNA polymerase n=1 Tax=Leucothrix mucor T... [more]
UPI001ACFAFBA5.780e-6039.65Protein UmuC n=1 Tax=Methylococcales bacterium Tax... [more]
A0A1H2EPT1_9PROT7.750e-6039.24DNA polymerase V n=3 Tax=Nitrosomonas ureae TaxID=... [more]
A0A7V7X3Z9_9BACT8.140e-6036.97Y-family DNA polymerase n=1 Tax=bacterium TaxID=18... [more]
A0A5C7KFT6_9GAMM4.290e-5939.86Y-family DNA polymerase n=1 Tax=Sinobacteraceae ba... [more]
A0A6H9XTT5_9PROT5.620e-5938.11Y-family DNA polymerase n=1 Tax=Betaproteobacteria... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036775DNA polymerase, Y-family, little finger domain superfamilyGENE3D3.30.1490.100coord: 104..220
e-value: 9.9E-6
score: 27.7
IPR036775DNA polymerase, Y-family, little finger domain superfamilySUPERFAMILY100879Lesion bypass DNA polymerase (Y-family), little finger domaincoord: 106..210
NoneNo IPR availableGENE3D1.10.150.20coord: 32..95
e-value: 1.9E-7
score: 32.9
NoneNo IPR availablePANTHERPTHR11076DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBERcoord: 1..273
NoneNo IPR availablePANTHERPTHR11076:SF34PROTEIN UMUCcoord: 1..273
IPR025188Domain of unknown function DUF4113PFAMPF13438DUF4113coord: 233..282
e-value: 2.8E-21
score: 75.3
IPR017961DNA polymerase, Y-family, little finger domainPFAMPF11799IMS_Ccoord: 108..222
e-value: 3.4E-14
score: 53.3
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 1..51
score: 13.257918
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99254contigL-digitata_M_contig99254:3..854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99254.1.1mRNA_L-digitata_M_contig99254.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99254 3..854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99254.1.1 ID=prot_L-digitata_M_contig99254.1.1|Name=mRNA_L-digitata_M_contig99254.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=284bp
SVGIGPTKTLSKAANYCSKIEAHRNGVFAPASHEWDQLLDEIPVKRVWGI
GYRWAKKMERLKIHTAKTLRDADDLAIKKKFNVVAQRIVLELRGIKCIEL
DDISQDRKNAACTRSFGTPLTDIKDIRKAVAFFCATLGTRIRADKQLTSQ
LSVFLSTGRFGKSVRYQRSHSMLLPEPSNHTPMLSKYAFAALDEIFKPGL
RYKQAGVFLSGLIDDSGQQFDLFTDRNHVKESSLMEALDSINHRYGRGKI
KMAAEGTDPKWVMKQAWRSDKYTTRWDELKTVC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036775DNA_pol_Y-fam_lit_finger_sf
IPR025188DUF4113
IPR017961DNA_pol_Y-fam_little_finger
IPR001126UmuC
IPR043502DNA/RNA_pol_sf