prot_L-digitata_M_contig9920.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9920.1.1
Unique Nameprot_L-digitata_M_contig9920.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length127
Homology
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BLAST of mRNA_L-digitata_M_contig9920.1.1 vs. uniprot
Match: A0A6H5JRQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ9_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.950e-26
Identity = 68/94 (72.34%), Postives = 76/94 (80.85%), Query Frame = 0 
Query:   34 EVKWEETAGARRAAKQMERRATEEAEALAEQRKAVALARVRLHEQQMEMTLQMSEIRKALDLMKHVQRLEDQGARRLALELGTVACERGEQQAR 127
            EVKW+E   ARRA KQMER    EAE LAEQRKA+ALARVRLHE QMEM LQMSEIRKAL++MK V  +ED  ARRLALELGT+AC+RG+  AR
Sbjct:  585 EVKWKEITTARRAIKQMERGVVNEAEGLAEQRKALALARVRLHEHQMEMVLQMSEIRKALEVMKRVDSIEDAPARRLALELGTLACDRGQSAAR 678
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BLAST of mRNA_L-digitata_M_contig9920.1.1 vs. uniprot
Match: D8LEG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG2_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 3.820e-20
Identity = 55/79 (69.62%), Postives = 65/79 (82.28%), Query Frame = 0 
Query:   49 QMERRATEEAEALAEQRKAVALARVRLHEQQMEMTLQMSEIRKALDLMKHVQRLEDQGARRLALELGTVACERGEQQAR 127
            +ME+   +EAE LAEQRKA+ LARVRLHE QMEM LQMSEIRKAL++MK V  +ED  ARRLALELGT+AC+RG+  AR
Sbjct:  320 EMEKGVVDEAEGLAEQRKALVLARVRLHEHQMEMVLQMSEIRKALEVMKRVDSIEDAPARRLALELGTLACDRGQSAAR 398
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9920.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRQ9_9PHAE1.950e-2672.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEG2_ECTSI3.820e-2069.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9920contigL-digitata_M_contig9920:407..6449 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9920.1.1mRNA_L-digitata_M_contig9920.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9920 407..6449 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9920.1.1 ID=prot_L-digitata_M_contig9920.1.1|Name=mRNA_L-digitata_M_contig9920.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=127bp
FLHEAREEGRRARDEACQAREMEAGVVEREAKVEVKWEETAGARRAAKQM
ERRATEEAEALAEQRKAVALARVRLHEQQMEMTLQMSEIRKALDLMKHVQ
RLEDQGARRLALELGTVACERGEQQAR
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