prot_L-digitata_M_contig9917.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9917.1.1
Unique Nameprot_L-digitata_M_contig9917.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length109
Homology
BLAST of mRNA_L-digitata_M_contig9917.1.1 vs. uniprot
Match: D7FNX4_ECTSI (Putative anion:sodium symporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNX4_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 2.640e-50
Identity = 94/105 (89.52%), Postives = 99/105 (94.29%), Query Frame = 0
Query:    1 MTPLLCKLLLGTVVPVDAVGIAFSTIQVVLAPIVVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGLSLQIPIILLHLIGGLMGYAVSAA 105
            MTPLLCKLLLGTVVPVDAVGIAFST+QVVLAPIVVGMMTNKFFP  V AVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGL+LQIPIILLHL+GGL+GY +  A
Sbjct:  202 MTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIVVGMMTNKFFPSVVKAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGLALQIPIILLHLLGGLIGYFLPKA 306          
BLAST of mRNA_L-digitata_M_contig9917.1.1 vs. uniprot
Match: A0A836CI93_9STRA (Putative anion:sodium symporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI93_9STRA)

HSP 1 Score: 162 bits (409), Expect = 8.280e-47
Identity = 86/102 (84.31%), Postives = 95/102 (93.14%), Query Frame = 0
Query:    1 MTPLLCKLLLGTVVPVDAVGIAFSTIQVVLAPIVVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGLSLQIPIILLHLIGGLMGYAV 102
            MTPLLCKLLLG VVPVDA+GIA ST++VVLAPI VGM TNK+FPK V AVLP+TPVVGVLSTCFLVASAVAQVAPTIISAG++LQIPIILLHL+GGL+GY V
Sbjct:  143 MTPLLCKLLLGAVVPVDALGIARSTVEVVLAPIAVGMATNKYFPKLVKAVLPITPVVGVLSTCFLVASAVAQVAPTIISAGIALQIPIILLHLVGGLLGYLV 244          
BLAST of mRNA_L-digitata_M_contig9917.1.1 vs. uniprot
Match: A0A1E7FNI1_9STRA (BASS family transporter: sodium ion/bile acid n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNI1_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.130e-40
Identity = 77/102 (75.49%), Postives = 85/102 (83.33%), Query Frame = 0
Query:    1 MTPLLCKLLLGTVVPVDAVGIAFSTIQVVLAPIVVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGLSLQIPIILLHLIGGLMGYAV 102
            MTPL+CK LLGTVVPVDA GIAFSTIQVVL PI VGM TNKFFP  V  +LP+TPV+GVLSTC LVASAVAQV   I++AGL LQ PI LLHLIGGL+GY +
Sbjct:   95 MTPLICKGLLGTVVPVDAAGIAFSTIQVVLGPIAVGMATNKFFPNFVKKILPITPVIGVLSTCMLVASAVAQVTEPILNAGLQLQAPIFLLHLIGGLVGYGL 196          
BLAST of mRNA_L-digitata_M_contig9917.1.1 vs. uniprot
Match: A0A7S1D1B0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1B0_CYCTE)

HSP 1 Score: 144 bits (364), Expect = 1.430e-40
Identity = 77/100 (77.00%), Postives = 86/100 (86.00%), Query Frame = 0
Query:    1 MTPLLCKLLLGTVVPVDAVGIAFSTIQVVLAPIVVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGLSLQIPIILLHLIGGLMGY 100
            MTPLLCK LLGTVVPVDAVGIA ST+QVVLAPI +GM TNKFFP  V  VLP  PVVGV+STC LVASAVAQVA  I+ AG+SLQIP++LLHL+GGL+GY
Sbjct:  118 MTPLLCKALLGTVVPVDAVGIAMSTLQVVLAPIAIGMTTNKFFPGFVKTVLPFAPVVGVVSTCLLVASAVAQVAAPILDAGVSLQIPVLLLHLVGGLVGY 217          
BLAST of mRNA_L-digitata_M_contig9917.1.1 vs. uniprot
Match: A0A7S1E294_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E294_9STRA)

HSP 1 Score: 143 bits (361), Expect = 5.370e-40
Identity = 75/105 (71.43%), Postives = 92/105 (87.62%), Query Frame = 0
Query:    1 MTPLLCKLLLGTVVPVDAVGIAFSTIQVVLAPIVVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGLSLQIPIILLHLIGGLMGYAVSAA 105
            MTPLLCK +LGTVVPVDAVGIA ST+QVVLAPI +GM  N+FFPK V A+LP+TPVVGVLSTC LVASAVAQV+  I++AGL+LQ+P++LLH++GGL+GY +  A
Sbjct:  130 MTPLLCKAVLGTVVPVDAVGIAKSTLQVVLAPIALGMTANQFFPKFVKAILPITPVVGVLSTCMLVASAVAQVSEPIMNAGLTLQLPLLLLHVVGGLVGYFLPKA 234          
BLAST of mRNA_L-digitata_M_contig9917.1.1 vs. uniprot
Match: A0A448ZNR0_9STRA (Uncharacterized protein n=3 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZNR0_9STRA)

HSP 1 Score: 143 bits (361), Expect = 3.840e-39
Identity = 75/100 (75.00%), Postives = 86/100 (86.00%), Query Frame = 0
Query:    1 MTPLLCKLLLGTVVPVDAVGIAFSTIQVVLAPIVVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGLSLQIPIILLHLIGGLMGY 100
            MTPL+CK +LGTVVPVDAVGIA STIQVVLAPI +GM TNKFFP  V  +LP+TPVVGVLSTC LVASAVAQV+  I++AGL LQ P+ LLHL+GGL+GY
Sbjct:  223 MTPLICKAVLGTVVPVDAVGIAMSTIQVVLAPIAIGMTTNKFFPNFVKXILPITPVVGVLSTCLLVASAVAQVSEPIMNAGLQLQTPVFLLHLLGGLVGY 322          
BLAST of mRNA_L-digitata_M_contig9917.1.1 vs. uniprot
Match: A0A7S2RGT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RGT9_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.720e-38
Identity = 74/102 (72.55%), Postives = 84/102 (82.35%), Query Frame = 0
Query:    1 MTPLLCKLLLGTVVPVDAVGIAFSTIQVVLAPIVVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGLSLQIPIILLHLIGGLMGYAV 102
            MTP LCKL LG VVPVDA GIA ST+QVVLAPI +GM    FFPK V+ +LP  PVVGV+STC LVASAVAQVA  I+SAGLSLQ+P +LLHLIGGL+GYA+
Sbjct:   21 MTPFLCKLALGAVVPVDATGIAISTLQVVLAPIALGMSFKSFFPKFVDKILPFAPVVGVVSTCLLVASAVAQVADPIMSAGLSLQLPCLLLHLIGGLVGYAL 122          
BLAST of mRNA_L-digitata_M_contig9917.1.1 vs. uniprot
Match: B8CAH3_THAPS (Sodium dependent bile acid symporter n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAH3_THAPS)

HSP 1 Score: 137 bits (345), Expect = 5.730e-38
Identity = 71/100 (71.00%), Postives = 84/100 (84.00%), Query Frame = 0
Query:    1 MTPLLCKLLLGTVVPVDAVGIAFSTIQVVLAPIVVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGLSLQIPIILLHLIGGLMGY 100
            MTP LCK +LG VVPVDA GIA STIQVVLAPI +GM  NKFFPK V A+LP  PVVGV+STC LVASAVAQV+  I++AG+ LQIP++LLHL+GG++GY
Sbjct:   95 MTPFLCKSMLGAVVPVDARGIAMSTIQVVLAPIAIGMTANKFFPKIVKAILPFAPVVGVVSTCLLVASAVAQVSEPILNAGIGLQIPVLLLHLLGGIVGY 194          
BLAST of mRNA_L-digitata_M_contig9917.1.1 vs. uniprot
Match: A0A6U2HAE6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2HAE6_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.170e-37
Identity = 74/102 (72.55%), Postives = 86/102 (84.31%), Query Frame = 0
Query:    1 MTPLLCKLLLGTVVPVDAVGIAFSTIQVVLAPIVVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGLSLQIPIILLHLIGGLMGYAV 102
            MTPLLCK LLG VVPVDA GIA STIQVVLAPI +GM+TN +FP  V  +LP  PVVGV+STC LVASAVAQVA  I++AGL LQIP++LLHL+GGL+GYA+
Sbjct:  178 MTPLLCKGLLGAVVPVDARGIAISTIQVVLAPIAIGMLTNSYFPAFVEKILPFAPVVGVVSTCLLVASAVAQVAEPILAAGLGLQIPVLLLHLVGGLIGYAL 279          
BLAST of mRNA_L-digitata_M_contig9917.1.1 vs. uniprot
Match: A0A7S1XKP9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKP9_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.180e-37
Identity = 72/101 (71.29%), Postives = 88/101 (87.13%), Query Frame = 0
Query:    2 TPLLCKLLLGTVVPVDAVGIAFSTIQVVLAPIVVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGLSLQIPIILLHLIGGLMGYAV 102
            TPLLCK+LLG VVPV+AVGIA STIQVVLAPI +GM  NKFFPKAV +VLP+TPV+G  STC LVA++VAQ AP I++AGL LQ P++LLHL+GGL+GY++
Sbjct:  226 TPLLCKVLLGAVVPVNAVGIAVSTIQVVLAPIFLGMTLNKFFPKAVKSVLPLTPVIGTFSTCLLVAASVAQCAPDIMNAGLKLQFPVLLLHLVGGLIGYSL 326          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9917.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNX4_ECTSI2.640e-5089.52Putative anion:sodium symporter n=2 Tax=Ectocarpus... [more]
A0A836CI93_9STRA8.280e-4784.31Putative anion:sodium symporter n=1 Tax=Tribonema ... [more]
A0A1E7FNI1_9STRA1.130e-4075.49BASS family transporter: sodium ion/bile acid n=1 ... [more]
A0A7S1D1B0_CYCTE1.430e-4077.00Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1E294_9STRA5.370e-4071.43Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A448ZNR0_9STRA3.840e-3975.00Uncharacterized protein n=3 Tax=Pseudo-nitzschia T... [more]
A0A7S2RGT9_9STRA1.720e-3872.55Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
B8CAH3_THAPS5.730e-3871.00Sodium dependent bile acid symporter n=1 Tax=Thala... [more]
A0A6U2HAE6_9STRA1.170e-3772.55Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1XKP9_9STRA1.180e-3771.29Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002657Bile acid:sodium symporter/arsenical resistance protein Acr3PFAMPF01758SBFcoord: 1..77
e-value: 2.7E-8
score: 33.7
IPR038770Sodium/solute symporter superfamilyGENE3D1.20.1530.20coord: 1..106
e-value: 6.7E-20
score: 73.3
NoneNo IPR availablePANTHERPTHR10361:SF62SODIUM/PYRUVATE COTRANSPORTER BASS2, CHLOROPLASTICcoord: 1..105
IPR004710Bile acid:sodium symporterPANTHERPTHR10361SODIUM-BILE ACID COTRANSPORTERcoord: 1..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9917contigL-digitata_M_contig9917:1846..3722 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9917.1.1mRNA_L-digitata_M_contig9917.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9917 1846..3722 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9917.1.1 ID=prot_L-digitata_M_contig9917.1.1|Name=mRNA_L-digitata_M_contig9917.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=109bp
MTPLLCKLLLGTVVPVDAVGIAFSTIQVVLAPIVVGMMTNKFFPKAVNAV
LPVTPVVGVLSTCFLVASAVAQVAPTIISAGLSLQIPIILLHLIGGLMGY
AVSAAEWA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002657BilAc:Na_symport/Acr3
IPR038770Na+/solute_symporter_sf
IPR004710Bilac:Na_transpt