prot_L-digitata_M_contig99145.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99145.1.1
Unique Nameprot_L-digitata_M_contig99145.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length169
Homology
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BLAST of mRNA_L-digitata_M_contig99145.1.1 vs. uniprot
Match: A0A2E6VS64_9DELT (PpiC domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6VS64_9DELT)

HSP 1 Score: 60.1 bits (144), Expect = 1.760e-7
Identity = 56/181 (30.94%), Postives = 97/181 (53.59%), Query Frame = 0 
Query:    1 VNEIKEPVRKKLDDVKDEIARVLAQDG----KAGTIAKAKADEI---AALAKTKA-----NLAEVADELKETVTFELKVEETGPFASQAQFLPKLGAAKDVAKAAWDLTEAAPVGG-PIETDRAWVVIRLKEKLEPKDEDFKTQRLGIAYRMIISKQNALQDKWFKMLKAREKVEVDPIAI 168
            V EIKE   KK+++V+ EIA  L +D     KA  +A+    ++   AA+A  K        AE A + K    F  ++E TG FA  A+++PK+G +++V KAA++L+  AP+G    E ++   VI+LK++ +P  + F  ++  +   +   +Q      + K L+   KV+V+P  +
Sbjct:  336 VEEIKEASTKKIEEVRTEIADELYKDSVKNDKANALAQDALKQLQAGAAMADLKIPDLYNKDAENAPD-KPADPFAPRLENTGFFAKNARYIPKVGISEEVVKAAFELSTDAPLGTRAYEVNKRLFVIKLKQRTKPDMKLFDDEKGALRTSLSRQRQGEAVQNFVKALRENSKVQVNPSVV 515
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99145.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2E6VS64_9DELT1.760e-730.94PpiC domain-containing protein n=1 Tax=Myxococcale... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..60
IPR046357Peptidyl-prolyl cis-trans isomerase domain superfamilyGENE3D3.10.50.40coord: 2..156
e-value: 2.7E-6
score: 29.4
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePFAMPF13145Rotamase_2coord: 23..129
e-value: 5.8E-6
score: 27.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99145contigL-digitata_M_contig99145:3..509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99145.1.1mRNA_L-digitata_M_contig99145.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99145 3..509 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99145.1.1 ID=prot_L-digitata_M_contig99145.1.1|Name=mRNA_L-digitata_M_contig99145.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=169bp
VNEIKEPVRKKLDDVKDEIARVLAQDGKAGTIAKAKADEIAALAKTKANL
AEVADELKETVTFELKVEETGPFASQAQFLPKLGAAKDVAKAAWDLTEAA
PVGGPIETDRAWVVIRLKEKLEPKDEDFKTQRLGIAYRMIISKQNALQDK
WFKMLKAREKVEVDPIAIS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR046357PPIase_dom_sf
IPR000297PPIase_PpiC