prot_L-digitata_M_contig99128.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99128.2.1
Unique Nameprot_L-digitata_M_contig99128.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length107
Homology
BLAST of mRNA_L-digitata_M_contig99128.2.1 vs. uniprot
Match: A0A359CBS1_9DELT (Rhomboid family intramembrane serine protease n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A359CBS1_9DELT)

HSP 1 Score: 93.2 bits (230), Expect = 3.400e-21
Identity = 45/107 (42.06%), Postives = 62/107 (57.94%), Query Frame = 0
Query:    1 LIPVRDINPRVRVPWVNYGLLAVNAALFLFLFSVQGDAVDLVQRHGFISADLLSATTESSQVALWRSAQHALTSIFLHGGWLQLVGNLLYLRVFGDNLEDRFGAVLY 107
            +IP++D  P  R P+VNYGL+A+N A+FL+  S+     D V  +G I    L          L       L+++FLHGGW  L+GN+LYL +FGDN+EDR G   Y
Sbjct:    1 MIPLKDTVPVTRTPYVNYGLIALNVAVFLYQLSLGEQLTDFVYAYGLIPFRFLQMVPRDPGELLT-----PLSAMFLHGGWAHLLGNMLYLHIFGDNIEDRLGHGRY 102          
BLAST of mRNA_L-digitata_M_contig99128.2.1 vs. uniprot
Match: A0A3A4NTY6_9DELT (Rhomboid family intramembrane serine protease n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3A4NTY6_9DELT)

HSP 1 Score: 90.1 bits (222), Expect = 5.140e-20
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 0
Query:    1 LIPVRDINPRVRVPWVNYGLLAVNAALFLFLFSVQGDAVDLVQRHGFISADLLSATTESSQVALWRSAQHALTSIFLHGGWLQLVGNLLYLRVFGDNLEDRFG 103
            +IP+RD  P  RVP VNY L+AVN A FL+  ++  +    VQ++  + A  +    +S++  L       +T++FLHGGW+ ++GN+LYL +FGDN+ED  G
Sbjct:    1 MIPIRDTIPSSRVPVVNYALIAVNVAAFLYQVALGEELFPFVQKYAVVPARFVVDVFQSTREMLT-----PVTAMFLHGGWMHMLGNMLYLYIFGDNVEDTLG 98          
BLAST of mRNA_L-digitata_M_contig99128.2.1 vs. uniprot
Match: A0A7C3EMZ5_9PROT (Rhomboid family intramembrane serine protease n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C3EMZ5_9PROT)

HSP 1 Score: 89.7 bits (221), Expect = 8.290e-20
Identity = 45/107 (42.06%), Postives = 64/107 (59.81%), Query Frame = 0
Query:    1 LIPVRDINPRVRVPWVNYGLLAVNAALFLFLFSVQGDAVDLVQRHGFISADLLSATTESSQVALWRSAQHALTSIFLHGGWLQLVGNLLYLRVFGDNLEDRFGAVLY 107
            +IP++D  P   VP VNY L+ VN  LFL+  S+  +    +   G + A L  A     ++ L+      +TS+FLHGGWL L+GN+LYL +FGDN+EDR G + Y
Sbjct:    1 MIPLKDTIPSRTVPVVNYTLILVNVVLFLYQISLGYELEKFLYTWGVVPA-LFFAPLTYRELGLFDRVLPLVTSMFLHGGWLHLLGNMLYLYIFGDNVEDRIGHIKY 106          
BLAST of mRNA_L-digitata_M_contig99128.2.1 vs. uniprot
Match: A0A534X9T0_9DELT (Rhomboid family intramembrane serine protease n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534X9T0_9DELT)

HSP 1 Score: 89.0 bits (219), Expect = 1.170e-19
Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = 0
Query:    1 LIPVRDINPRVRVPWVNYGLLAVNAALFLFLFSVQGDAVDLVQRH-GFISADLLSATTESSQVALWRSAQHALTSIFLHGGWLQLVGNLLYLRVFGDNLEDRFGAVLY 107
            +IP+RD  P  RVP VNY ++A N  +F +  S+ G   +L+ +H G + ++    T               LTS+FLHGGWL ++GN+LYL +FGDN+EDR G + Y
Sbjct:    1 MIPLRDTIPSARVPIVNYAVIAANVLVFCYEVSLGGRQAELLIKHWGLVPSNFAVETL--------------LTSMFLHGGWLHVLGNMLYLYIFGDNVEDRLGHLRY 94          
BLAST of mRNA_L-digitata_M_contig99128.2.1 vs. uniprot
Match: A0A7C7R031_9RHOB (Rhomboid family intramembrane serine protease n=1 Tax=Roseibacterium sp. TaxID=2003362 RepID=A0A7C7R031_9RHOB)

HSP 1 Score: 89.4 bits (220), Expect = 2.730e-19
Identity = 44/109 (40.37%), Postives = 67/109 (61.47%), Query Frame = 0
Query:    1 LIPVRDINPRVRVPWVNYGLLAVNAALFLFLF-SVQGDAVDL---VQRHGFISADLLSATTESSQVALWRSAQHALTSIFLHGGWLQLVGNLLYLRVFGDNLEDRFGAV 105
            + P+RD NP  R+P+V +GL+A+N  +FL  F ++ G   +L    +  G +  D++S            +AQ  +TS+FLHGGW+ L+GN+L+L +FGDNLED  G V
Sbjct:    1 MFPIRDHNPSERMPFVTWGLIAINTVVFLSYFPAISGSDAELEAFYRTWGLVPRDVMSGG----------NAQTLITSMFLHGGWMHLIGNMLFLWIFGDNLEDLMGHV 99          
BLAST of mRNA_L-digitata_M_contig99128.2.1 vs. uniprot
Match: A0A3D0Z2G7_9FIRM (Rhomboid family intramembrane serine protease n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A3D0Z2G7_9FIRM)

HSP 1 Score: 88.2 bits (217), Expect = 3.000e-19
Identity = 41/108 (37.96%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    1 LIPVRDINPRVRVPWVNYGLLAVNAALFLFLFSVQ-GDAVDLVQRHGFISADLLSATTESSQVALWRSAQHALTSIFLHGGWLQLVGNLLYLRVFGDNLEDRFGAVLY 107
            +IP+RD       P VN  ++ +N A++L++ ++  G+A+  V R+GF+ A L +    +   A        +T++F+HGGW+ +VGN+LYL VFGDN+EDR G   Y
Sbjct:    1 MIPLRDSTRSRTFPAVNVAIILINLAVWLYMLTLSPGEAMRFVFRYGFVPASLAAVDWSAPIAAATAVLPPLVTAMFVHGGWMHVVGNMLYLWVFGDNIEDRLGRARY 108          
BLAST of mRNA_L-digitata_M_contig99128.2.1 vs. uniprot
Match: A0A538T3V1_9BACT (Rhomboid family intramembrane serine protease n=1 Tax=Candidatus Eisenbacteria bacterium TaxID=2212470 RepID=A0A538T3V1_9BACT)

HSP 1 Score: 88.2 bits (217), Expect = 3.240e-19
Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = 0
Query:    1 LIPVRDINPRVRVPWVNYGLLAVNAALFLFLFSVQGDAVDLVQRHGFISADLLSATTESSQVALWRSAQHALTSIFLHGGWLQLVGNLLYLRVFGDNLEDRFGAV 105
            +IP+RD NP    P V  GL+ +N A+F++  S+  D  D +   G + A L +A     +   W       +S+FLHGGW  L+GN+ YL +FGDN+ED+FGA+
Sbjct:    1 MIPLRDQNPSRSTPVVTRGLIVLNVAMFIYELSLGPDLRDFLFSWGLVPARLPAALEVGGESLGWTGLTFV-SSLFLHGGWAHLIGNMWYLWIFGDNVEDQFGAL 104          
BLAST of mRNA_L-digitata_M_contig99128.2.1 vs. uniprot
Match: A0A0T6AB62_9DELT (Peptidase S54, rhomboid domain-containing protein n=1 Tax=Deltaproteobacteria bacterium CSP1-8 TaxID=1640514 RepID=A0A0T6AB62_9DELT)

HSP 1 Score: 88.2 bits (217), Expect = 4.030e-19
Identity = 42/107 (39.25%), Postives = 63/107 (58.88%), Query Frame = 0
Query:    1 LIPVRDINPRVRVPWVNYGLLAVNAALFLFLFSVQGDAVDLVQRHGFISADLLSATTESSQVALWRSAQHALTSIFLHGGWLQLVGNLLYLRVFGDNLEDRFGAVLY 107
            +IP++D  P  R+P+VNYGL+A+N A+FL+  ++     D V  +G I    L          L       L+++FLHGGW+ L+GN+LYL +FG+N+ED  G   Y
Sbjct:   19 IIPLKDTIPSSRIPYVNYGLIALNCAVFLYQLALGERLTDFVYTYGVIPFRFLQIFPRDPGELLT-----PLSAMFLHGGWMHLLGNMLYLHIFGNNVEDMLGRGRY 120          
BLAST of mRNA_L-digitata_M_contig99128.2.1 vs. uniprot
Match: A0A367Z261_9BACT (Rhomboid family serine protease n=1 Tax=Ignavibacteriae bacterium TaxID=2026749 RepID=A0A367Z261_9BACT)

HSP 1 Score: 87.8 bits (216), Expect = 4.060e-19
Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = 0
Query:    1 LIPVRDINPRVRVPWVNYGLLAVNAALFLFLFSVQGDAVDLVQRHGFISADLLSATTESSQ---VALWRSAQHALTSIFLHGGWLQLVGNLLYLRVFGDNLEDRFGAVLY 107
            +IP+RD NPR   P VNY L+ VN  +FLF  S+  +    +   G +   L    TE  Q   + L R+     +S+F+HGGW+ L+GN+L+L +FGDN+EDR G + Y
Sbjct:    1 MIPLRDTNPRYTFPIVNYTLITVNVLVFLFQISLGKNFESFIYTFGLVPYRL----TEQIQFFDLGL-RTFLPVFSSMFMHGGWMHLIGNMLFLHIFGDNVEDRIGHIKY 105          
BLAST of mRNA_L-digitata_M_contig99128.2.1 vs. uniprot
Match: A0A1X7BVZ0_9RHOB (Rhomboid protease GluP n=1 Tax=Roseovarius aestuarii TaxID=475083 RepID=A0A1X7BVZ0_9RHOB)

HSP 1 Score: 88.2 bits (217), Expect = 4.180e-19
Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 0
Query:    1 LIPVRDINPRVRVPWVNYGLLAVNAALFLFLFSVQGDAVDLVQRHGFISADLLSATTESSQVALWRSAQHALTSIFLHGGWLQLVGNLLYLRVFGDNLEDRFGAVLY 107
            +IP+RD NP  RVP+V Y L+A+N A+FL  + +  D   L Q     +   +  T + +   L+       TS+FLHGGW+ L GN+L+L +FGDN+ED  G + Y
Sbjct:    1 MIPIRDHNPSGRVPYVTYALIAINVAIFLSYWPLFNDPRALNQFFDAWAMTPVGVTEQGAYAGLF-------TSMFLHGGWMHLAGNMLFLWIFGDNIEDDMGHIPY 100          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99128.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A359CBS1_9DELT3.400e-2142.06Rhomboid family intramembrane serine protease n=1 ... [more]
A0A3A4NTY6_9DELT5.140e-2040.78Rhomboid family intramembrane serine protease n=1 ... [more]
A0A7C3EMZ5_9PROT8.290e-2042.06Rhomboid family intramembrane serine protease n=1 ... [more]
A0A534X9T0_9DELT1.170e-1940.74Rhomboid family intramembrane serine protease n=1 ... [more]
A0A7C7R031_9RHOB2.730e-1940.37Rhomboid family intramembrane serine protease n=1 ... [more]
A0A3D0Z2G7_9FIRM3.000e-1937.96Rhomboid family intramembrane serine protease n=1 ... [more]
A0A538T3V1_9BACT3.240e-1940.00Rhomboid family intramembrane serine protease n=1 ... [more]
A0A0T6AB62_9DELT4.030e-1939.25Peptidase S54, rhomboid domain-containing protein ... [more]
A0A367Z261_9BACT4.060e-1940.91Rhomboid family serine protease n=1 Tax=Ignavibact... [more]
A0A1X7BVZ0_9RHOB4.180e-1940.19Rhomboid protease GluP n=1 Tax=Roseovarius aestuar... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 65..105
e-value: 9.1E-9
score: 35.5
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 12..107
e-value: 8.9E-13
score: 50.4
IPR035952Rhomboid-like superfamilySUPERFAMILY144091Rhomboid-likecoord: 9..105
NoneNo IPR availablePANTHERPTHR43066RHOMBOID-RELATED PROTEINcoord: 2..105
NoneNo IPR availablePANTHERPTHR43066:SF11RHOMBOID PROTEASE GLPGcoord: 2..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99128contigL-digitata_M_contig99128:638..958 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99128.2.1mRNA_L-digitata_M_contig99128.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99128 638..958 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99128.2.1 ID=prot_L-digitata_M_contig99128.2.1|Name=mRNA_L-digitata_M_contig99128.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=107bp
LIPVRDINPRVRVPWVNYGLLAVNAALFLFLFSVQGDAVDLVQRHGFISA
DLLSATTESSQVALWRSAQHALTSIFLHGGWLQLVGNLLYLRVFGDNLED
RFGAVLY
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
IPR035952Rhomboid-like_sf