prot_L-digitata_M_contig99002.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99002.1.1
Unique Nameprot_L-digitata_M_contig99002.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length88
Homology
BLAST of mRNA_L-digitata_M_contig99002.1.1 vs. uniprot
Match: A0A2E8H5N9_9BACT (Rhodanese domain-containing protein n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=A0A2E8H5N9_9BACT)

HSP 1 Score: 67.8 bits (164), Expect = 1.880e-11
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    1 IPNADFGSAIEAKFADKASKLLLIGAMGARSVRATQDLLARGYTEVIDVKGGLNGEYDDAGAVLNPGWLPENLPTQQGSTD-RAYRHL 87
            +PN DF   +EA F  + SKLL+    G RS +A + L+A G+ +V +VKGG  G  D AG V+ PGW  + LPT  G  + R+Y  L
Sbjct:  214 VPNPDFVIVVEAHF-PRDSKLLIGCQSGKRSEQAAEALVAAGFQDVTNVKGGYGGVKDPAGQVVEPGWFEQGLPTDYGEPEERSYEAL 300          
BLAST of mRNA_L-digitata_M_contig99002.1.1 vs. uniprot
Match: A0A4Q3JTZ8_9DELT (Rhodanese-like domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A4Q3JTZ8_9DELT)

HSP 1 Score: 65.1 bits (157), Expect = 2.290e-11
Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = 0
Query:    2 PNADFGSAIEAKFADKASKLLLIGAMGARSVRATQDLLARGYTEVIDVKGGLNGEYDDAGAVLNPGWLPENLPTQQGSTD-RAYRHL 87
            PNA+F + ++A F   A KL+L    GARS+RA ++L+  GYTE+I+ + G +G  D  GA   PGW P  LP  + + + R+Y  L
Sbjct:   55 PNAEFLNVMKANFKTDA-KLVLGCRSGARSLRAAEELIGAGYTEIIEQRAGFDGPRDAFGAATEPGWGPAGLPVSRTAANGRSYAEL 140          
BLAST of mRNA_L-digitata_M_contig99002.1.1 vs. uniprot
Match: A0A3D2Z916_9BACT (Rhodanese-like domain-containing protein n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A3D2Z916_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 5.310e-11
Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 0
Query:    1 IPNADFGSAIEAKFADKASKLLLIGAMGARSVRATQDLLARGYTEVIDVKGGLNGEYDDAGAVLNPGWLPENLPTQQGSTD-RAYRHL 87
            +PN+DF   +EA F  + +KLLL    G RS+ A + L+A G+ +V +VKGG  G  D  G  + PGW  + LPT  G  + R+Y  L
Sbjct:   40 VPNSDFVIVMEAHF-PRDTKLLLGCQSGKRSLTAAEALVAAGFKDVTNVKGGYGGVKDPTGQSIEPGWFDQGLPTDYGEPEQRSYAAL 126          
BLAST of mRNA_L-digitata_M_contig99002.1.1 vs. uniprot
Match: A0A7Y5NXI0_9DELT (Rhodanese-like domain-containing protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5NXI0_9DELT)

HSP 1 Score: 60.5 bits (145), Expect = 1.470e-9
Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 0
Query:    1 IPNADFGSAIEAKFADKASKLLLIGAMGARSVRATQDLLARGYTEVIDVKGGLNGEYDDAGAVLNPGWLPENLPTQQGSTDRAYRHLE 88
            +PN +F   ++ K  +K   +++    G RS++A+Q L+A GYT VID + G  G  D  G +  PGW P+ LP ++ +   +Y  L+
Sbjct:   55 VPNPEFLPVMQ-KLYEKNCPMVVGCKSGGRSLKASQALIAAGYTAVIDQRAGFEGPRDSFGKLTEPGWSPQGLPVEKETPGASYAELK 141          
BLAST of mRNA_L-digitata_M_contig99002.1.1 vs. uniprot
Match: A0A1F2SAZ7_9BACT (Rhodanese domain-containing protein n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20 TaxID=1797179 RepID=A0A1F2SAZ7_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 1.730e-7
Identity = 29/72 (40.28%), Postives = 40/72 (55.56%), Query Frame = 0
Query:    3 NADFGSAIEAKFADKASKLLLIGAMGARSVRATQDLLARGYTEVIDVKGGLNGEYDDAGAVLNPGWLPENLP 74
            N  F   ++  FA K +KL+     G RS++A Q LLA G+  V D++GG  GE D  G ++ PGW    LP
Sbjct:   56 NPHFVDVVQKNFA-KDAKLVCGCQRGVRSLKAAQMLLAAGFANVTDMRGGFGGETDHCGCIVAPGWATSGLP 126          
BLAST of mRNA_L-digitata_M_contig99002.1.1 vs. uniprot
Match: A0A6L8HLS6_9BACT (Rhodanese-like domain-containing protein n=3 Tax=Acidobacteriia bacterium TaxID=2081523 RepID=A0A6L8HLS6_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 2.310e-7
Identity = 30/87 (34.48%), Postives = 47/87 (54.02%), Query Frame = 0
Query:    2 PNADFGSAIEAKFADKASKLLLIGAMGARSVRATQDLLARGYTEVIDVKGGLNGEYDDAGAVLNPGWLPENLP-TQQGSTDRAYRHL 87
            PN +F    E +   + +K++     G RS+RA Q L A G+T V+D++GG +GE +  G ++  GW    LP T + + D  Y  L
Sbjct:   55 PNGEFVDVCE-RALGRDAKIITACLKGGRSMRAAQLLQANGFTNVVDMRGGFDGESNPMGQIVYDGWARRGLPVTTEAADDETYSGL 140          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99002.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2E8H5N9_9BACT1.880e-1143.18Rhodanese domain-containing protein n=1 Tax=Gemmat... [more]
A0A4Q3JTZ8_9DELT2.290e-1141.38Rhodanese-like domain-containing protein n=1 Tax=M... [more]
A0A3D2Z916_9BACT5.310e-1140.91Rhodanese-like domain-containing protein n=1 Tax=C... [more]
A0A7Y5NXI0_9DELT1.470e-934.09Rhodanese-like domain-containing protein n=1 Tax=P... [more]
A0A1F2SAZ7_9BACT1.730e-740.28Rhodanese domain-containing protein n=1 Tax=Acidob... [more]
A0A6L8HLS6_9BACT2.310e-734.48Rhodanese-like domain-containing protein n=3 Tax=A... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036873Rhodanese-like domain superfamilyGENE3D3.40.250.10coord: 1..86
e-value: 9.5E-12
score: 46.9
IPR036873Rhodanese-like domain superfamilySUPERFAMILY52821Rhodanese/Cell cycle control phosphatasecoord: 5..78
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 1..65
score: 9.943383
NoneNo IPR availableCDDcd00158RHODcoord: 1..55
e-value: 1.68561E-8
score: 45.3682

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99002contigL-digitata_M_contig99002:2..265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99002.1.1mRNA_L-digitata_M_contig99002.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99002 2..265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99002.1.1 ID=prot_L-digitata_M_contig99002.1.1|Name=mRNA_L-digitata_M_contig99002.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=88bp
IPNADFGSAIEAKFADKASKLLLIGAMGARSVRATQDLLARGYTEVIDVK
GGLNGEYDDAGAVLNPGWLPENLPTQQGSTDRAYRHLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036873Rhodanese-like_dom_sf
IPR001763Rhodanese-like_dom