prot_L-digitata_M_contig98503.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98503.1.1
Unique Nameprot_L-digitata_M_contig98503.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length75
Homology
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BLAST of mRNA_L-digitata_M_contig98503.1.1 vs. uniprot
Match: D8LQV5_ECTSI (Acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV5_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 2.090e-21
Identity = 51/67 (76.12%), Postives = 53/67 (79.10%), Query Frame = 0 
Query:    1 MSVFVVPTVVAIGAGVLCKG-LGLGVALSFLLSPLWLWMTVRWLEDGVACLNACVELSTLLRRSKQV 66
            MSVFVVP VVA+GA  L KG LGL    S L+SP WLWMTVRWLEDGVACLNACVELSTLL R  QV
Sbjct:  408 MSVFVVPAVVALGAMALTKGPLGLRAGFSLLVSPAWLWMTVRWLEDGVACLNACVELSTLLTRRGQV 474
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BLAST of mRNA_L-digitata_M_contig98503.1.1 vs. uniprot
Match: A0A6H5JZH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH4_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.360e-19
Identity = 51/75 (68.00%), Postives = 54/75 (72.00%), Query Frame = 0 
Query:    1 MSVFVVPTVVAIGAGVLCKG-LGLGVALSFLLSPLWLWMTVRWLEDGVACLNACVELSTLLRRSKQVRWGNIKVT 74
            MSVFVVPTVV +GA VL K  LGL V  S L+SP WLWMTVR LEDGVACLNA VELSTLL R  Q     +K T
Sbjct:   10 MSVFVVPTVVLLGAMVLTKDPLGLRVGASLLVSPAWLWMTVRGLEDGVACLNAWVELSTLLFRQGQGLEARVKAT 84
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BLAST of mRNA_L-digitata_M_contig98503.1.1 vs. uniprot
Match: D7G4Y5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y5_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 1.380e-13
Identity = 35/45 (77.78%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:   17 LCKG-LGLGVALSFLLSPLWLWMTVRWLEDGVACLNACVELSTLL 60
            L KG L L    S L+SP WLWMTVRWLEDGVACLNACVELSTLL
Sbjct:    3 LTKGPLELRAGFSLLVSPAWLWMTVRWLEDGVACLNACVELSTLL 47
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98503.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQV5_ECTSI2.090e-2176.12Acyltransferase n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A6H5JZH4_9PHAE1.360e-1968.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4Y5_ECTSI1.380e-1377.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98503contigL-digitata_M_contig98503:394..852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98503.1.1mRNA_L-digitata_M_contig98503.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98503 394..873 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98503.1.1 ID=prot_L-digitata_M_contig98503.1.1|Name=mRNA_L-digitata_M_contig98503.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=75bp
MSVFVVPTVVAIGAGVLCKGLGLGVALSFLLSPLWLWMTVRWLEDGVACL
NACVELSTLLRRSKQVRWGNIKVT*
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