prot_L-digitata_M_contig98470.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98470.1.1
Unique Nameprot_L-digitata_M_contig98470.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length68
Homology
BLAST of mRNA_L-digitata_M_contig98470.1.1 vs. uniprot
Match: A0A2S6QCK6_9PROT (ATP-dependent Clp protease ATP-binding subunit ClpX n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6QCK6_9PROT)

HSP 1 Score: 115 bits (288), Expect = 4.980e-29
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0
Query:    1 IAQKGIQRKTGARGLRSILESILLETMYELPGLEGVEEIAINGEVVEGRSQPLYIYADTREESGTTA 67
            I++K I RKTGARGLRSILESILLETMYELP LEGVEEIA+NGEVVEGRSQPLYIYAD  EESGT+A
Sbjct:  355 ISKKAIGRKTGARGLRSILESILLETMYELPSLEGVEEIAVNGEVVEGRSQPLYIYADKLEESGTSA 421          
BLAST of mRNA_L-digitata_M_contig98470.1.1 vs. uniprot
Match: A0A6N7FDC4_9PROT (AAA domain-containing protein (Fragment) n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FDC4_9PROT)

HSP 1 Score: 104 bits (260), Expect = 1.310e-26
Identity = 50/67 (74.63%), Postives = 61/67 (91.04%), Query Frame = 0
Query:    1 IAQKGIQRKTGARGLRSILESILLETMYELPGLEGVEEIAINGEVVEGRSQPLYIYADTREESGTTA 67
            IA++   RKTGARGLRSILE+ILL+TMY+LPGLEGVEE+AIN EVVEGR++PLYIYAD RE+ G++A
Sbjct:  136 IAKRANLRKTGARGLRSILEAILLDTMYDLPGLEGVEEVAINSEVVEGRAKPLYIYADRREDMGSSA 202          
BLAST of mRNA_L-digitata_M_contig98470.1.1 vs. uniprot
Match: A0A1J5RME6_9ZZZZ (ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5RME6_9ZZZZ)

HSP 1 Score: 108 bits (271), Expect = 1.380e-26
Identity = 52/67 (77.61%), Postives = 61/67 (91.04%), Query Frame = 0
Query:    1 IAQKGIQRKTGARGLRSILESILLETMYELPGLEGVEEIAINGEVVEGRSQPLYIYADTREESGTTA 67
            IA+K I RKTGARGLRSI+E ILLETM++LPGLE VEE+ INGEVVEGR+QPLYIYAD RE++GT+A
Sbjct:  355 IARKAIARKTGARGLRSIMEGILLETMFDLPGLETVEEVVINGEVVEGRAQPLYIYADRREDTGTSA 421          
BLAST of mRNA_L-digitata_M_contig98470.1.1 vs. uniprot
Match: A0A0H2MWK7_9PROT (ATP-dependent Clp protease ATP-binding subunit ClpX n=6 Tax=Rhodospirillales TaxID=204441 RepID=A0A0H2MWK7_9PROT)

HSP 1 Score: 106 bits (265), Expect = 9.920e-26
Identity = 50/67 (74.63%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    1 IAQKGIQRKTGARGLRSILESILLETMYELPGLEGVEEIAINGEVVEGRSQPLYIYADTREESGTTA 67
            IA+K I+RKTGARGLRSI+E ILL+TMYELPGL+GVEEI IN EVV G++QPLYIY D++EE+GT A
Sbjct:  355 IAEKAIERKTGARGLRSIMEGILLDTMYELPGLKGVEEIVINSEVVTGKAQPLYIYGDSKEETGTDA 421          
BLAST of mRNA_L-digitata_M_contig98470.1.1 vs. uniprot
Match: A0A833G303_9HYPH (AAA domain-containing protein n=1 Tax=Bauldia sp. TaxID=2575872 RepID=A0A833G303_9HYPH)

HSP 1 Score: 101 bits (252), Expect = 1.250e-25
Identity = 46/66 (69.70%), Postives = 61/66 (92.42%), Query Frame = 0
Query:    1 IAQKGIQRKTGARGLRSILESILLETMYELPGLEGVEEIAINGEVVEGRSQPLYIYADTREESGTT 66
            IA+K I+RKTGARGLRSI+ESILLETM++LPGL+GV+E+ I+ +VVEG+S+PLYIY+D RE+ G+T
Sbjct:  115 IAKKAIERKTGARGLRSIMESILLETMFDLPGLDGVQEVVISSDVVEGKSRPLYIYSDRREDVGST 180          
BLAST of mRNA_L-digitata_M_contig98470.1.1 vs. uniprot
Match: A0A523FZ43_9PROT (ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523FZ43_9PROT)

HSP 1 Score: 106 bits (264), Expect = 1.380e-25
Identity = 51/67 (76.12%), Postives = 62/67 (92.54%), Query Frame = 0
Query:    1 IAQKGIQRKTGARGLRSILESILLETMYELPGLEGVEEIAINGEVVEGRSQPLYIYADTREESGTTA 67
            IA+K I+RKTGARGLRSI+E+ILLE+MYELP LE VEEI I+GEVVEGR++PLYIYAD RE++GT+A
Sbjct:  355 IARKAIKRKTGARGLRSIMENILLESMYELPSLESVEEIMISGEVVEGRAKPLYIYADRREDTGTSA 421          
BLAST of mRNA_L-digitata_M_contig98470.1.1 vs. uniprot
Match: UPI0019D904B8 (ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019D904B8)

HSP 1 Score: 105 bits (261), Expect = 3.690e-25
Identity = 51/67 (76.12%), Postives = 59/67 (88.06%), Query Frame = 0
Query:    1 IAQKGIQRKTGARGLRSILESILLETMYELPGLEGVEEIAINGEVVEGRSQPLYIYADTREESGTTA 67
            IAQK I RKTGARGLRSI+E+ILL+ MYELPGLEGVEEI IN EVVEG ++PLYIY+D RE+ GT+A
Sbjct:  355 IAQKAITRKTGARGLRSIMEAILLDAMYELPGLEGVEEIVINREVVEGNAKPLYIYSDRREDVGTSA 421          
BLAST of mRNA_L-digitata_M_contig98470.1.1 vs. uniprot
Match: A0A3M1IQN5_9PROT (ATP-dependent Clp protease ATP-binding subunit ClpX (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1IQN5_9PROT)

HSP 1 Score: 99.0 bits (245), Expect = 5.150e-25
Identity = 46/67 (68.66%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    1 IAQKGIQRKTGARGLRSILESILLETMYELPGLEGVEEIAINGEVVEGRSQPLYIYADTREESGTTA 67
            IA K I+RKTGARGLRSI+E ILL+TMY+LP L+GVEE+ IN EVVEG+++PLYIY+D R + G+TA
Sbjct:   76 IAHKAIERKTGARGLRSIMEDILLDTMYDLPSLDGVEEVVINREVVEGKARPLYIYSDRRGDVGSTA 142          
BLAST of mRNA_L-digitata_M_contig98470.1.1 vs. uniprot
Match: A0A437QXW6_9PROT (ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QXW6_9PROT)

HSP 1 Score: 104 bits (260), Expect = 5.170e-25
Identity = 49/67 (73.13%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    1 IAQKGIQRKTGARGLRSILESILLETMYELPGLEGVEEIAINGEVVEGRSQPLYIYADTREESGTTA 67
            +A+K I RKTGARGLRSI+ESILL+ MYELPGLEGVEE+ IN EVVEGR++PLYIYA+ R++ G+TA
Sbjct:  355 VAKKAIMRKTGARGLRSIMESILLDPMYELPGLEGVEEVVINKEVVEGRAEPLYIYAERRDDVGSTA 421          
BLAST of mRNA_L-digitata_M_contig98470.1.1 vs. uniprot
Match: A0A2E9Y0M2_9PROT (ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9Y0M2_9PROT)

HSP 1 Score: 103 bits (258), Expect = 9.870e-25
Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    1 IAQKGIQRKTGARGLRSILESILLETMYELPGLEGVEEIAINGEVVEGRSQPLYIYADTREESGTTA 67
            IA+K I RKTGARGLRSI+ESILL+TMY+LP  EG EE+ INGEVVEGR+QPLYIYAD +E+ GT A
Sbjct:  355 IARKAISRKTGARGLRSIMESILLDTMYDLPSEEGAEEVVINGEVVEGRAQPLYIYADRQEDVGTGA 421          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98470.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2S6QCK6_9PROT4.980e-2986.57ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A6N7FDC4_9PROT1.310e-2674.63AAA domain-containing protein (Fragment) n=2 Tax=A... [more]
A0A1J5RME6_9ZZZZ1.380e-2677.61ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A0H2MWK7_9PROT9.920e-2674.63ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A833G303_9HYPH1.250e-2569.70AAA domain-containing protein n=1 Tax=Bauldia sp. ... [more]
A0A523FZ43_9PROT1.380e-2576.12ATP-dependent Clp protease ATP-binding subunit Clp... [more]
UPI0019D904B83.690e-2576.12ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A3M1IQN5_9PROT5.150e-2568.66ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A437QXW6_9PROT5.170e-2573.13ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A2E9Y0M2_9PROT9.870e-2574.63ATP-dependent Clp protease ATP-binding subunit Clp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.60coord: 1..67
e-value: 5.2E-17
score: 63.8
IPR019489Clp ATPase, C-terminalPFAMPF10431ClpB_D2-smallcoord: 1..31
e-value: 9.6E-7
score: 28.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98470contigL-digitata_M_contig98470:3..206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98470.1.1mRNA_L-digitata_M_contig98470.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98470 3..206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98470.1.1 ID=prot_L-digitata_M_contig98470.1.1|Name=mRNA_L-digitata_M_contig98470.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=68bp
IAQKGIQRKTGARGLRSILESILLETMYELPGLEGVEEIAINGEVVEGRS
QPLYIYADTREESGTTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019489Clp_ATPase_C