prot_L-digitata_M_contig98443.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98443.1.1
Unique Nameprot_L-digitata_M_contig98443.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length94
Homology
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BLAST of mRNA_L-digitata_M_contig98443.1.1 vs. uniprot
Match: A0A661P1N5_9DELT (Uncharacterized protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A661P1N5_9DELT)

HSP 1 Score: 51.2 bits (121), Expect = 1.940e-5
Identity = 23/67 (34.33%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:   20 GFLDIQVDHDGARIFVDGAIIGLSPYKQKKQVEAGKHQVQVELLGFNRWAGEVEVKRDETTIVPVAL 86
            G+L I    DGAR++VDG ++G +P+K+  ++  GKH+++    GF  +  E  ++R   T + V L
Sbjct:   38 GWLVIDSPVDGARVYVDGRLVGKTPFKRPLKLRPGKHRLKATKAGFGTFKTEFRIRRGRRTEISVDL 104
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BLAST of mRNA_L-digitata_M_contig98443.1.1 vs. uniprot
Match: A0A7V6B6G4_9DELT (PEGA domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V6B6G4_9DELT)

HSP 1 Score: 50.4 bits (119), Expect = 4.190e-5
Identity = 26/82 (31.71%), Postives = 49/82 (59.76%), Query Frame = 0 
Query:    5 KPLALDFKLKKLENVGFLDIQVDHDGARIFVDGAIIGLSPYKQKKQVEAGKHQVQVELLGFNRWAGEVEVKRDETTIVPVAL 86
            +P+ L+F L +    G L   V+   ARI++DG ++ ++PY+   +V+AG HQV +E   + +++  V V+ ++T  V  +L
Sbjct:  259 EPMKLNFSLSR--ESGGLAFNVNVAKARIYIDGKVVAITPYRDVVRVQAGAHQVVIEKERYTKFSETVTVEPNQTIEVKASL 338
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98443.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A661P1N5_9DELT1.940e-534.33Uncharacterized protein n=2 Tax=Proteobacteria Tax... [more]
A0A7V6B6G4_9DELT4.190e-531.71PEGA domain-containing protein n=1 Tax=Deltaproteo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013229PEGAPFAMPF08308PEGAcoord: 22..86
e-value: 3.4E-10
score: 39.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98443contigL-digitata_M_contig98443:671..952 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98443.1.1mRNA_L-digitata_M_contig98443.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98443 671..967 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98443.1.1 ID=prot_L-digitata_M_contig98443.1.1|Name=mRNA_L-digitata_M_contig98443.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=94bp
MPDDKPLALDFKLKKLENVGFLDIQVDHDGARIFVDGAIIGLSPYKQKKQ
VEAGKHQVQVELLGFNRWAGEVEVKRDETTIVPVALVEYVAPVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013229PEGA