prot_L-digitata_M_contig9844.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9844.2.1
Unique Nameprot_L-digitata_M_contig9844.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length85
Homology
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BLAST of mRNA_L-digitata_M_contig9844.2.1 vs. uniprot
Match: D7FR58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR58_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 3.580e-40
Identity = 72/87 (82.76%), Postives = 78/87 (89.66%), Query Frame = 0 
Query:    1 EISCVNFLVQSRTHRRVSSSQAARRSRGPSTRGPPDSMQMLCTRNEDIIVAVFFDVKTCVTTSTENQGSVREFLNQA--SLCFTYSG 85
            EISCVNFLV+SRTHRRVSSSQA RR+RGPS R  PDSMQMLCTRNEDIIVAVFFDVKTCVTTSTENQGSVR+F+NQ   S C T++G
Sbjct:   58 EISCVNFLVKSRTHRRVSSSQATRRTRGPSARSLPDSMQMLCTRNEDIIVAVFFDVKTCVTTSTENQGSVRQFINQVKNSFCETFAG 144
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BLAST of mRNA_L-digitata_M_contig9844.2.1 vs. uniprot
Match: A0A6H5JLG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG3_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 5.460e-19
Identity = 40/42 (95.24%), Postives = 42/42 (100.00%), Query Frame = 0 
Query:   38 MQMLCTRNEDIIVAVFFDVKTCVTTSTENQGSVREFLNQASL 79
            MQMLCTRNEDIIVAVFFDVKTCVTTSTENQGSVR+FLNQAS+
Sbjct:    1 MQMLCTRNEDIIVAVFFDVKTCVTTSTENQGSVRQFLNQASV 42
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9844.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR58_ECTSI3.580e-4082.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLG3_9PHAE5.460e-1995.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9844contigL-digitata_M_contig9844:8250..9402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9844.2.1mRNA_L-digitata_M_contig9844.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9844 8250..9402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9844.2.1 ID=prot_L-digitata_M_contig9844.2.1|Name=mRNA_L-digitata_M_contig9844.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=85bp
EISCVNFLVQSRTHRRVSSSQAARRSRGPSTRGPPDSMQMLCTRNEDIIV
AVFFDVKTCVTTSTENQGSVREFLNQASLCFTYSG
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