prot_L-digitata_M_contig9843.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9843.2.1
Unique Nameprot_L-digitata_M_contig9843.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length146
Homology
BLAST of mRNA_L-digitata_M_contig9843.2.1 vs. uniprot
Match: A0A6H5L1U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1U0_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 7.020e-42
Identity = 75/145 (51.72%), Postives = 99/145 (68.28%), Query Frame = 0
Query:    2 FPSLGAFLGRLQELLKPRKSTDRKFLKQRIQQNVMSGRRHRNGNNGKYRICGTACDPAAPSYIKQMDIGVVDAKTAKGGWAVNSWQILDDGTEDVRRIPLGSGRYHIMSDVASS-SSHAHHQVVVDEDLLTIFGALTTWVVDCDP 145
            F SL  FLG L +L KPR STDR F KQR+QQ++ SGRRH +  N  +R+C T  + +AP  +KQ++IG+ DA  AKGG AVN WQ+  DG  D RR    +G YH+M  VA+   SHAHHQ +V+++L+   GALTT+V+D DP
Sbjct:  104 FRSLAPFLGPLAKLCKPRPSTDRLFTKQRVQQSIKSGRRHHDAKNAPWRVCVTVANLSAPKGLKQLEIGMTDASKAKGGGAVNPWQLQADGEPDARRFDCVTGSYHVMDTVATGLDSHAHHQALVNKELILKHGALTTFVLDLDP 248          
BLAST of mRNA_L-digitata_M_contig9843.2.1 vs. uniprot
Match: D8LFC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC5_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 7.950e-36
Identity = 72/146 (49.32%), Postives = 96/146 (65.75%), Query Frame = 0
Query:    1 QFPSLGAFLGRLQELLKPRKSTDRKFLKQRIQQNVMSGRRHRNGNNGKYRICGTACDPAAPSYIKQMDIGVVDAKTAKGGWAVNSWQILDDGTEDVRRIPLGSGRYHIMSDVAS-SSSHAHHQVVVDEDLLTIFGALTTWVVDCDP 145
            +FPSL  FL  L  L K R ST R F+KQR QQ   SGRRHR+G NG++R+C T  +P AP   K++++GV DA+ AKG  A N WQ+  DGT D+  I   +G Y IM +V + ++SHAHHQ ++D++ L   GA T +VVD DP
Sbjct:  160 RFPSLAPFLVPLDNLCKRRDSTVRLFVKQRAQQYTTSGRRHRDGKNGRWRMCITVHNPGAPLGFKRLEVGVADARVAKGDQATNPWQLKADGTPDMECIDCTTGSYQIMDEVGTGTASHAHHQAIIDKNPLPQHGAPTMFVVDFDP 305          
BLAST of mRNA_L-digitata_M_contig9843.2.1 vs. uniprot
Match: A0A6H5J6K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K4_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.040e-33
Identity = 67/124 (54.03%), Postives = 85/124 (68.55%), Query Frame = 0
Query:    1 QFPSLGAFLGRLQE-LLKPRKSTDRKFLKQRIQQNVMSGRRHRNGNNGKYRICGTACDPAAPSYIKQMDIGVVDAKTAKGGWAVNSWQILDDGTEDVRRIPLGSGRYHIMSDVASSS-SHAHHQ 122
            +FPSL  FLG +++ L KPR +TDR FLKQR QQ   SGRRHR+G NG +R+C T  DPAAP + KQ++IG+ D   AKG  AVN +Q   DGT D RR    SG YH+M +VA+ + SHA H+
Sbjct:   61 RFPSLAPFLGPVEKKLCKPRPTTDRLFLKQRAQQYTTSGRRHRDGKNGPWRMCVTIHDPAAPPHAKQLEIGLADGSKAKGDGAVNPFQTKADGTPDSRRFDCPSGSYHLMDEVATGTVSHASHK 184          
BLAST of mRNA_L-digitata_M_contig9843.2.1 vs. uniprot
Match: A0A6H5K3Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q8_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.590e-28
Identity = 65/145 (44.83%), Postives = 88/145 (60.69%), Query Frame = 0
Query:    2 FPSLGAFLGRLQELLKPRKSTDRKFLKQRIQQNVMSGRRHRNGNNGKYRICGTACDPAAPSYIKQMDIGVVDAKTAKGGWAVNSWQILDDGTEDVRRIPLGSGRYHIMSDVAS-SSSHAHHQVVVDEDLLTIFGALTTWVVDCDP 145
            F SL  FLG L++L KPR STDR FLKQR QQ + SGRRHR+G NG +R+C T  +P AP   K++++                     DGT D+  I   +G YH M +V + ++SHAHHQ ++D++LL   GA TT+V+D DP
Sbjct:  147 FSSLAPFLGPLEKLCKPRDSTDRLFLKQRAQQYITSGRRHRDGKNGLWRMCVTVHNPGAPPGFKRLELKA-------------------DGTPDMECIDCPAGSYHTMDEVGTGTASHAHHQEIIDKNLLREHGAPTTFVLDFDP 272          
BLAST of mRNA_L-digitata_M_contig9843.2.1 vs. uniprot
Match: A0A6H5KI01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI01_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 8.040e-23
Identity = 50/90 (55.56%), Postives = 64/90 (71.11%), Query Frame = 0
Query:    2 FPSLGAFLGRLQELLKPRKSTDRKFLKQRIQQNVMSGRRHRNGNNGKYRICGTACDPAAPSYIKQMDIGVVDAKTAKGGWAVNSWQILDD 91
            F SL  FLG L++L K R STDR FLKQR QQ + SGRRHR+G NG +R+C T  +P AP   K++++GV DA+ AKGG A+N WQ+  D
Sbjct:  147 FSSLAPFLGPLEKLCKLRDSTDRLFLKQRAQQYITSGRRHRDGRNGLWRMCVTVHNPGAPPGFKRLEVGVADARVAKGGDAINPWQLKAD 236          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9843.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L1U0_9PHAE7.020e-4251.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFC5_ECTSI7.950e-3649.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J6K4_9PHAE2.040e-3354.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3Q8_9PHAE3.590e-2844.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI01_9PHAE8.040e-2355.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9843contigL-digitata_M_contig9843:4981..5418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9843.2.1mRNA_L-digitata_M_contig9843.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9843 4981..5418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9843.2.1 ID=prot_L-digitata_M_contig9843.2.1|Name=mRNA_L-digitata_M_contig9843.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=146bp
QFPSLGAFLGRLQELLKPRKSTDRKFLKQRIQQNVMSGRRHRNGNNGKYR
ICGTACDPAAPSYIKQMDIGVVDAKTAKGGWAVNSWQILDDGTEDVRRIP
LGSGRYHIMSDVASSSSHAHHQVVVDEDLLTIFGALTTWVVDCDPK
back to top