prot_L-digitata_M_contig98416.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98416.1.1
Unique Nameprot_L-digitata_M_contig98416.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length179
Homology
BLAST of mRNA_L-digitata_M_contig98416.1.1 vs. uniprot
Match: A0A250IPA6_9DELT (Gliding motility protein n=1 Tax=Melittangium boletus DSM 14713 TaxID=1294270 RepID=A0A250IPA6_9DELT)

HSP 1 Score: 108 bits (269), Expect = 1.720e-24
Identity = 65/166 (39.16%), Postives = 100/166 (60.24%), Query Frame = 0
Query:   14 FDGSLLNNLSVLYREKKQYKDAISALRTLLMRDQKNIDAYKNLALVYYDQKKFKLTQTILENALKMAKEQKRKDPDIYVNLGMVYLSREENGKAMAAFKKALEVDPNHIAANYNIGALALGHRDYGLAAKAYGVVAKARPGDGYVAASLGYAYQGQQNLDEAKKWL 179
            F+ +LLNNLS  YR   +Y  A S+ R +L R  ++++AYKNL L +Y+Q +++L +T+L +A K+A     KDP ++ +LGMVYL  ++  +A+A F++A+ +D        N+GALAL  RDY  A +A+    +  PG      S  +A  GQ+  D AKK L
Sbjct:  161 FEAALLNNLSTAYRLAGKYPQAESSARRVLARHPEDVEAYKNLGLAHYEQGRYRLAETVLTHARKLAD----KDPGLHNSLGMVYLKLDQRPRALAQFQQAVSLDERFAPGYENLGALALAWRDYAGAERAFAKAVELEPGSPSAWLSYAWALDGQKGRD-AKKGL 321          
BLAST of mRNA_L-digitata_M_contig98416.1.1 vs. uniprot
Match: UPI001EF93B3A (tetratricopeptide repeat protein n=1 Tax=Archangium primigenium TaxID=2792470 RepID=UPI001EF93B3A)

HSP 1 Score: 97.4 bits (241), Expect = 1.490e-20
Identity = 61/163 (37.42%), Postives = 92/163 (56.44%), Query Frame = 0
Query:   14 FDGSLLNNLSVLYREKKQYKDAISALRTLLMRDQKNIDAYKNLALVYYDQKKFKLTQTILENALKMAKEQKRKDPDIYVNLGMVYLSREENGKAMAAFKKALEVDPNHIAANYNIGALALGHRDYGLAAKAYGVVAKARPGDGYVAASLGYAYQGQQNLDEAK 176
            F+ +LLNNLS  YR   +   A S+ R +L R  ++ +A+KNL L    Q +++L +T+L  A K+A     KDP ++ +LGMVYL  E+  +A+A F+KA+ +D      + N+GALAL  RDY  A +A+    +  PG      S  +A  GQ+  D  K
Sbjct:  167 FEPALLNNLSTAYRLAGKPAQAESSARRVLARHPEDAEAFKNLGLAALAQGRYRLAETVLLQARKLAD----KDPGVHNDLGMVYLKLEQRPRALAQFQKAVALDERFAPGHVNLGALALAWRDYAGAERAFAKAVELEPGSSSAWLSYAWALDGQKGRDPQK 325          
BLAST of mRNA_L-digitata_M_contig98416.1.1 vs. uniprot
Match: A0A2E7ULX1_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7ULX1_9DELT)

HSP 1 Score: 89.7 bits (221), Expect = 1.120e-17
Identity = 51/141 (36.17%), Postives = 82/141 (58.16%), Query Frame = 0
Query:    1 AISIYTKALKKKPFDGSLLNNLSVLYREKKQYKDAISALRTLLMRDQKNIDAYKNLALVYYDQKKFKLTQTILENALKMAKEQKRKDPDIYVNLGMVYLSREENGKAMAAFKKALEVDPNHIAANYNIGALALGHRDYGLA 141
            A+++Y   ++K P D    N L         Y DAIS  +T+LM D KN+ AY+NL+ +Y+ + ++K++Q   E A ++A      D  IY N+G+ YL  +    A+  FK A+++DP+++ AN N+G +AL   DY LA
Sbjct:  130 AVALYRAYVEKAPEDLEARNALMEALTAGDYYDDAISEAKTILMSDAKNVGAYRNLSRLYFSKGEYKMSQLCAEKAKELAAG----DAGIYNNIGVTYLVMDNEASAIGEFKTAIQLDPDNLEANLNLGLVALNSGDYELA 266          
BLAST of mRNA_L-digitata_M_contig98416.1.1 vs. uniprot
Match: S9P3X8_9DELT (Tetratricopeptide repeat family n=4 Tax=Cystobacter TaxID=42 RepID=S9P3X8_9DELT)

HSP 1 Score: 86.3 bits (212), Expect = 1.760e-16
Identity = 49/104 (47.12%), Postives = 70/104 (67.31%), Query Frame = 0
Query:   15 DGSLLNNLSVLYREKKQYKDAISALRTLLMRDQKNIDAYKNLALVYYDQKKFKLTQTILENALKMAKEQKRKDPDIYVNLGMVYLSREENGKAMAAFKKALEVD 118
            + +LLNNLSV YR   +   A +  R +L R   + +AYKNLALVYY+Q +++L +T+L NA K+A+    KDP I  NLGMVYL  E+  +A+A F+KA+ +D
Sbjct:  177 EPALLNNLSVAYRLAGKLPQAEATSRRVLSRHPDDAEAYKNLALVYYEQGRYRLAETVLVNARKLAE----KDPGISNNLGMVYLKLEDRPRALAQFQKAVSLD 276          
BLAST of mRNA_L-digitata_M_contig98416.1.1 vs. uniprot
Match: A0A2S9XFW7_9DELT (Photosystem I assembly protein Ycf3 n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9XFW7_9DELT)

HSP 1 Score: 82.8 bits (203), Expect = 2.940e-15
Identity = 62/198 (31.31%), Postives = 110/198 (55.56%), Query Frame = 0
Query:    1 AISIYTKAL---KKKPFDGSLLNNLSVLYREKKQYKDAISA---------LRTLLMRDQKNIDAYKNLALVYYDQKKFK------LTQTILENALKMAKEQKRKDPDIYVNLGMVYLSREENGKAMAAFKKALEVDPNHIAANYNIGALALGHRDYGLAAKAYGVVAKARP--GDGYVAASLGYAYQGQQNLDEAKKW 178
            A+ ++ K++   KK+ F     NNL+  +R++  Y D +S          ++ +L  D  N  AY+NLA +YYD+ + K      L+  ++  AL++ ++++++  DI+   G++++  +    A+ AFKKA+E++PNH  AN NIG +A+  RDY  A KA+    KA     D  V  ++G A +G +   EA++W
Sbjct:  146 ALDLFKKSVDADKKQAFAAR--NNLAAAHRDR--YADKLSQEDFDTAEKQIQNVLAVDTSNKAAYENLARLYYDRGRLKDQSYLVLSNLVVTQALRVLEKEQQQSADIWNLKGLLFMQDDNQIDALKAFKKAVEIEPNHPDANRNIGFIAIRFRDYPAAEKAFDTALKAASVKRDLEVHIAMGVAKRGLKKFKEAEEW 339          
BLAST of mRNA_L-digitata_M_contig98416.1.1 vs. uniprot
Match: A0A2Z4FGG3_9DELT (Uncharacterized protein n=2 Tax=Bradymonas sediminis TaxID=1548548 RepID=A0A2Z4FGG3_9DELT)

HSP 1 Score: 80.9 bits (198), Expect = 1.310e-14
Identity = 56/182 (30.77%), Postives = 101/182 (55.49%), Query Frame = 0
Query:    5 YTKA-------LKKKPFDGSLLNNLSVLYREKKQYKDAISALRTLLMRDQKNIDAYKNLALVYYDQKKFKLTQTILENALKMAKEQKRKDPDIYVNLGMVYLSREENGKAMAAFKKALEVDPNHIAANYNIGALALGHRDYGLAAKAYGVVAKARPGDGYVAASLGYAYQ--GQQNLDEAKK 177
            YTKA       + ++P + +  NNL+VL  +    + A+  +R +L  D +N+ A  +L L+Y  ++   L + +   A+K+A  +K+ DPDI+ NLGMVY++ +E  + +  F+ A +VDPN++ +  N+G++ + + DY  AA  +    +  P +    A LG+A    G    +EA+K
Sbjct:  173 YTKAQNLLEEVIARQPTNLTAKNNLAVLALKAGDDEKAMEYVRDVLKEDNENVGALNSLGLIYVKRENASLAKYVFTKAIKLA--EKKPDPDIHNNLGMVYMAEDEVAQGVKQFEAANKVDPNYLESRLNLGSILIEYLDYERAATQFEEAVRISPNN--CVAHLGHAASSFGLGKAEEAQK 350          
BLAST of mRNA_L-digitata_M_contig98416.1.1 vs. uniprot
Match: A0A3M2A8L6_9DELT (Tetratricopeptide repeat protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M2A8L6_9DELT)

HSP 1 Score: 78.6 bits (192), Expect = 8.950e-14
Identity = 58/192 (30.21%), Postives = 99/192 (51.56%), Query Frame = 0
Query:    1 AISIYTKALKKKPFDGSLLNNLSVLYREK-------KQYKDAISALRTLLMRDQKNIDAYKNLALVYYDQKKFK------LTQTILENALKMAKEQKRKDPDIYVNLGMVYLSREENGKAMAAFKKALEVDPNHIAANYNIGALALGHRDYGLAAKAYGVVAKARPGDGYVAA--SLGYAYQGQQNLDEAKK 177
            A+S + KA++  P   +  NNL+   R++       K ++ A   ++ +L  D  N  AY+NLA +YYD+ + K      L   ++   +K+ KE   +  D+Y   G++ +      +A+ AFKKA+EVDPNH  AN N+  LA+  RD+    K++ + A+ R     +     LG A +G +   +A+K
Sbjct:  150 ALSYFKKAVEVNPRTNAPRNNLAAALRDRYSKTPDQKDFEAAEGHIQRVLAVDSNNRVAYENLARLYYDRGRLKDRSYLVLANLVVTQGIKVLKEAGLQSADLYNLKGLLLMEDNNQVEALKAFKKAVEVDPNHADANLNMALLAIRFRDFENGEKSFKIAARDRRHAKNIETFLGLGVAQRGLRKYGDAEK 341          
BLAST of mRNA_L-digitata_M_contig98416.1.1 vs. uniprot
Match: A0A2E7BS29_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E7BS29_9DELT)

HSP 1 Score: 77.8 bits (190), Expect = 1.470e-13
Identity = 49/167 (29.34%), Postives = 97/167 (58.08%), Query Frame = 0
Query:    2 ISIYTKALKKKPFDGSLLNNLSVLYREKKQYKDAISALRTLLMRDQKNIDAYKNLALVYYDQKKFKLTQT--------------ILENALKMAK-EQKRKDPDIYVNLGMVYLSREENGKAMAAFKKALEVDPNHIAANYNIGALALGHRDYGLAAKAYGVVAKARP 153
            + I     K+  F  ++L ++ V +R + + K A   ++ LL R   ++DAY NL+ +Y+ + + +  Q               ++ + LK+AK +Q +    ++ N+GM+++ R E G+A+A++++AL+++P+ +  + NIGA+AL +RD+G A + YG V K+ P
Sbjct:  147 LKILKAMAKEDEFSPTILASMVVFHRLRHEEKKAEELIQKLLSRHPDSVDAYMNLSSIYFGRAQREKDQATKRLYLAKAESVTGLVWDKLKLAKIKQGKSHAPLHNNMGMIWIERGEQGRALASWRRALQLNPDLLEPHLNIGAVALRYRDFGKAEEHYGRVLKSEP 313          
BLAST of mRNA_L-digitata_M_contig98416.1.1 vs. uniprot
Match: A0A2E4X1E6_9DELT (Uncharacterized protein n=2 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E4X1E6_9DELT)

HSP 1 Score: 76.3 bits (186), Expect = 5.110e-13
Identity = 50/155 (32.26%), Postives = 93/155 (60.00%), Query Frame = 0
Query:   14 FDGSLLNNLSVLYREKKQYKDAISALRTLLMRDQKNIDAYKNLALVYY---------DQKKFKLTQ-----TILENALKMAK-EQKRKDPDIYVNLGMVYLSREENGKAMAAFKKALEVDPNHIAANYNIGALALGHRDYGLAAKAYGVVAKARP 153
            F+  LL+++ V  R +++  +A   ++ LL R   +++AY +L+ +Y+         D+K+  L +     + + + LK+AK  Q ++   ++ NLGM+++ R E  +A++++K+ALE+DPN +  + NIGA+AL +RD+  A K YG V K  P
Sbjct:  159 FNEDLLSSMVVFLRLQQKESEAEKLIQKLLSRHPDSVNAYMSLSAIYFGRAQREKNPDEKRRYLAKAESVTSFVWDKLKLAKITQGKEHAPLHNNLGMIWIERGEQARALSSWKRALELDPNLLQPHLNIGAVALRYRDFATAEKHYGHVLKYEP 313          
BLAST of mRNA_L-digitata_M_contig98416.1.1 vs. uniprot
Match: A0A2W5V4Y5_9DELT (Gliding motility protein n=1 Tax=Archangium gephyra TaxID=48 RepID=A0A2W5V4Y5_9DELT)

HSP 1 Score: 73.6 bits (179), Expect = 4.860e-12
Identity = 47/141 (33.33%), Postives = 76/141 (53.90%), Query Frame = 0
Query:   35 AISALRTLLMRDQKNIDAYKNLALVYYDQKKFKLTQTILENALKMAKEQKRKDPDIYVNLGMVYLSREENGKAMAAFKKALEVDPNHIAANYNIGALALGHRDYGLAAKAYGVVAKARPGDGYVAASLGYAYQGQQNLDEA 175
            AI   R  L RD K + A+K + LVY ++K++ L + I   A K+       DP+I+  LG + L+ ++  KA A FK+A+EV P+++ A Y +  +A    DY  A +    + +A   +     +LG AY+G   LD+A
Sbjct:  188 AIELSREALFRDPKTLQAFKTMMLVYTERKQYALARLIALRASKIDDS----DPEIFYTLGTINLAEKDPSKARAQFKRAVEVRPDYLPAQYQLARMAFDQEDYQGAEEHLRRILQANGKNTDALVNLGVAYKGMGQLDKA 324          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98416.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A250IPA6_9DELT1.720e-2439.16Gliding motility protein n=1 Tax=Melittangium bole... [more]
UPI001EF93B3A1.490e-2037.42tetratricopeptide repeat protein n=1 Tax=Archangiu... [more]
A0A2E7ULX1_9DELT1.120e-1736.17Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
S9P3X8_9DELT1.760e-1647.12Tetratricopeptide repeat family n=4 Tax=Cystobacte... [more]
A0A2S9XFW7_9DELT2.940e-1531.31Photosystem I assembly protein Ycf3 n=1 Tax=Enhygr... [more]
A0A2Z4FGG3_9DELT1.310e-1430.77Uncharacterized protein n=2 Tax=Bradymonas sedimin... [more]
A0A3M2A8L6_9DELT8.950e-1430.21Tetratricopeptide repeat protein n=1 Tax=Deltaprot... [more]
A0A2E7BS29_9DELT1.470e-1329.34Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
A0A2E4X1E6_9DELT5.110e-1332.26Uncharacterized protein n=2 Tax=Myxococcales bacte... [more]
A0A2W5V4Y5_9DELT4.860e-1233.33Gliding motility protein n=1 Tax=Archangium gephyr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 50..83
e-value: 0.6
score: 19.2
coord: 122..155
e-value: 290.0
score: 2.1
coord: 16..49
e-value: 6.3
score: 15.8
coord: 88..121
e-value: 2.7E-6
score: 36.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 88..121
score: 13.5704
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 83..179
e-value: 5.6E-17
score: 63.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..82
e-value: 5.7E-17
score: 63.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..178
NoneNo IPR availablePFAMPF13431TPR_17coord: 5..36
e-value: 9.3E-5
score: 22.5
NoneNo IPR availablePANTHERPTHR45586:SF11LIPOPOLYSACCHARIDE ASSEMBLY PROTEIN Bcoord: 1..179
NoneNo IPR availablePANTHERPTHR45586TPR REPEAT-CONTAINING PROTEIN PA4667coord: 1..179
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 88..121
score: 10.405871
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 89..121
e-value: 8.7E-8
score: 31.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98416contigL-digitata_M_contig98416:434..970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98416.1.1mRNA_L-digitata_M_contig98416.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98416 434..970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98416.1.1 ID=prot_L-digitata_M_contig98416.1.1|Name=mRNA_L-digitata_M_contig98416.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=179bp
AISIYTKALKKKPFDGSLLNNLSVLYREKKQYKDAISALRTLLMRDQKNI
DAYKNLALVYYDQKKFKLTQTILENALKMAKEQKRKDPDIYVNLGMVYLS
REENGKAMAAFKKALEVDPNHIAANYNIGALALGHRDYGLAAKAYGVVAK
ARPGDGYVAASLGYAYQGQQNLDEAKKWL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR001440TPR_1