prot_L-digitata_M_contig98404.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98404.1.1
Unique Nameprot_L-digitata_M_contig98404.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length322
Homology
[Close]
BLAST of mRNA_L-digitata_M_contig98404.1.1 vs. uniprot
Match: A0A059EAD1_9PROT (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=10 Tax=root TaxID=1 RepID=A0A059EAD1_9PROT)

HSP 1 Score: 614 bits (1584), Expect = 1.340e-219
Identity = 303/322 (94.10%), Postives = 313/322 (97.20%), Query Frame = 0 
Query:    1 MRDVLRPLGYAPVDTPEAADLVVLNTCHIREKATEKVYSELGQLKRMKRKTGRNMTIAVAGCVAQAEGEEIMRRQPLVDLVLGPQAYHKLPEMIARASRAVGDRLETEFDTLEKFDALPKVREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDIVMEARNLAAQGVREITLLGQNVNAFHGAAPAVEGGDDWTLGQLCRHIAKIGGIERIRYTTSHPRDMEDDLIAAHGDTPQMQPFLHLPVQSGSDRILKAMNRSHTADAYREIIRKVRAAQPDIAIASDFIVGFPGESDEDFEATMQLVRDVNYAVAYSFKYS 322
            MRDVLRPLGYAPVDTPEAADLVVLNTCHIREKATEKVYSELGQLKRMK+ TG NMTIAVAGCVAQAEGEEIMRRQPLVDLVLGPQAYHKLPEMIARASRAVGDRLET+F+TLEKFDALPK READGPTAFLSVQEGCDKFCTFCVVPYTRGAELSR VDDIVMEARNLAAQGVREI+LLGQNVNAFHGAAP VEGG+DWTLGQLCRH+AKIGGIERIRYTTSHPRDM+DDLIAAHGDT QMQPFLHLPVQSGSDRILKAMNR HTAD YREIIRKVR AQPD+A+ASDFIVGFPGESDEDFEATMQLVRDVNYA+AYSFKYS
Sbjct:   30 MRDVLRPLGYAPVDTPEAADLVVLNTCHIREKATEKVYSELGQLKRMKQNTGSNMTIAVAGCVAQAEGEEIMRRQPLVDLVLGPQAYHKLPEMIARASRAVGDRLETDFETLEKFDALPKTREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRPVDDIVMEARNLAAQGVREISLLGQNVNAFHGAAPQVEGGEDWTLGQLCRHLAKIGGIERIRYTTSHPRDMDDDLIAAHGDTAQMQPFLHLPVQSGSDRILKAMNRGHTADEYREIIRKVREAQPDVALASDFIVGFPGESDEDFEATMQLVRDVNYAIAYSFKYS 351
[Close]
BLAST of mRNA_L-digitata_M_contig98404.1.1 vs. uniprot
Match: A0A062UBT2_9PROT (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=3 Tax=Hyphomonas TaxID=85 RepID=A0A062UBT2_9PROT)

HSP 1 Score: 592 bits (1526), Expect = 8.990e-211
Identity = 295/322 (91.61%), Postives = 305/322 (94.72%), Query Frame = 0 
Query:    1 MRDVLRPLGYAPVDTPEAADLVVLNTCHIREKATEKVYSELGQLKRMKRKTGRNMTIAVAGCVAQAEGEEIMRRQPLVDLVLGPQAYHKLPEMIARASRAVGDRLETEFDTLEKFDALPKVREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDIVMEARNLAAQGVREITLLGQNVNAFHGAAPAVEGGDDWTLGQLCRHIAKIGGIERIRYTTSHPRDMEDDLIAAHGDTPQMQPFLHLPVQSGSDRILKAMNRSHTADAYREIIRKVRAAQPDIAIASDFIVGFPGESDEDFEATMQLVRDVNYAVAYSFKYS 322
            MRDVLRPLGYAPVD+PE ADLVVLNTCHIREKATEKVYSELGQLKRMK  +G  MTIAVAGCVAQAEGEEIMRRQP VDLVLGPQAYHKLPEMIARASRAVGDRLETEFDTLEKFDALPK READGPTAFLSVQEGCDKFCTFCVVPYTRGAELSR VDDI +EAR LAAQGVREI+LLGQNVNAFHGA+PA+    DWTLGQL RH+AKIGGIERIRYTTSHPRDM+DDLIAAHGDTPQMQPFLHLPVQSGSDRILKAMNR HTAD YREIIRKVRAAQPDIA+ASDFIVGFPGESDEDFEATMQLVRDVNYA+AYSFKYS
Sbjct:   30 MRDVLRPLGYAPVDSPENADLVVLNTCHIREKATEKVYSELGQLKRMKEGSGGKMTIAVAGCVAQAEGEEIMRRQPAVDLVLGPQAYHKLPEMIARASRAVGDRLETEFDTLEKFDALPKTREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRPVDDITLEARALAAQGVREISLLGQNVNAFHGASPALTNETDWTLGQLVRHLAKIGGIERIRYTTSHPRDMDDDLIAAHGDTPQMQPFLHLPVQSGSDRILKAMNRGHTADEYREIIRKVRAAQPDIAMASDFIVGFPGESDEDFEATMQLVRDVNYAIAYSFKYS 351
[Close]
BLAST of mRNA_L-digitata_M_contig98404.1.1 vs. uniprot
Match: MIAB_HYPNA (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=MIAB_HYPNA)

HSP 1 Score: 578 bits (1491), Expect = 1.380e-205
Identity = 280/322 (86.96%), Postives = 303/322 (94.10%), Query Frame = 0 
Query:    1 MRDVLRPLGYAPVDTPEAADLVVLNTCHIREKATEKVYSELGQLKRMKRKTGRNMTIAVAGCVAQAEGEEIMRRQPLVDLVLGPQAYHKLPEMIARASRAVGDRLETEFDTLEKFDALPKVREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDIVMEARNLAAQGVREITLLGQNVNAFHGAAPAVEGGDDWTLGQLCRHIAKIGGIERIRYTTSHPRDMEDDLIAAHGDTPQMQPFLHLPVQSGSDRILKAMNRSHTADAYREIIRKVRAAQPDIAIASDFIVGFPGESDEDFEATMQLVRDVNYAVAYSFKYS 322
            +RDVLRPLGYAPV+TPE+ADLVV+NTCHIREKATEKVYSELGQLKRMK  +G  MTIAVAGCVAQAEGEE++RRQP VDLVLGPQAYHKLPEMIARASRA+GDRLETEFDT+EKFDALPK READGP AF+SVQEGCDKFCTFCVVPYTRGAE+SR VDDIV E R+LA+QGVREITLLGQNVNAFHG AP +EGG+DWTLGQLCRH++KIGGIERIRYTTSHPRDM+DDLIAAHGDTP M PFLHLPVQSGSDRILKAMNR HTAD YR+II +VRAA+PDIAIASDFIVGFPGESD DFEATMQLVRD+ YA+AYSFKYS
Sbjct:   21 IRDVLRPLGYAPVETPESADLVVVNTCHIREKATEKVYSELGQLKRMKEASGGRMTIAVAGCVAQAEGEELIRRQPAVDLVLGPQAYHKLPEMIARASRAIGDRLETEFDTVEKFDALPKTREADGPAAFVSVQEGCDKFCTFCVVPYTRGAEMSRRVDDIVFETRSLASQGVREITLLGQNVNAFHGPAPVLEGGEDWTLGQLCRHLSKIGGIERIRYTTSHPRDMDDDLIAAHGDTPAMMPFLHLPVQSGSDRILKAMNRGHTADHYRDIITRVRAARPDIAIASDFIVGFPGESDADFEATMQLVRDIGYAIAYSFKYS 342
[Close]
BLAST of mRNA_L-digitata_M_contig98404.1.1 vs. uniprot
Match: A0A0F2QBH4_9PROT (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=6 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A0F2QBH4_9PROT)

HSP 1 Score: 568 bits (1465), Expect = 2.830e-201
Identity = 280/322 (86.96%), Postives = 301/322 (93.48%), Query Frame = 0 
Query:    1 MRDVLRPLGYAPVDTPEAADLVVLNTCHIREKATEKVYSELGQLKRMKRKTGRNMTIAVAGCVAQAEGEEIMRRQPLVDLVLGPQAYHKLPEMIARASRAVGDRLETEFDTLEKFDALPKVREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDIVMEARNLAAQGVREITLLGQNVNAFHGAAPAVEGGDDWTLGQLCRHIAKIGGIERIRYTTSHPRDMEDDLIAAHGDTPQMQPFLHLPVQSGSDRILKAMNRSHTADAYREIIRKVRAAQPDIAIASDFIVGFPGESDEDFEATMQLVRDVNYAVAYSFKYS 322
            MRDVLRPLGYAPVD+ E ADLVVLNTCHIREKATEKVYSELGQLK +K++ G N+TIAVAGCVAQAEG EIMRRQP VDLVLGPQAYHKLPEMIARASRAVGDRLETEF+TLEKFDALPK READGPTAFLSVQEGCDKFCTFCVVPYTRGAELSR VDDIVMEAR+LAAQGVRE++LLGQNVNAFHGAAPA+    DWTLGQL RHIAK+GGI+RIRYTTSHPRDM+DDLIAAHG+ P+M PFLHLPVQSGSDRILKAMNR HTAD YR+IIRKVR A+PDIAIA+DFIVGFPGESD DFEATMQLVRD+ +A+AYSFKYS
Sbjct:   30 MRDVLRPLGYAPVDSAEQADLVVLNTCHIREKATEKVYSELGQLKLLKQERGGNLTIAVAGCVAQAEGAEIMRRQPAVDLVLGPQAYHKLPEMIARASRAVGDRLETEFETLEKFDALPKTREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRPVDDIVMEARSLAAQGVRELSLLGQNVNAFHGAAPALTNEADWTLGQLVRHIAKVGGIDRIRYTTSHPRDMDDDLIAAHGEVPEMMPFLHLPVQSGSDRILKAMNRGHTADHYRDIIRKVREARPDIAIATDFIVGFPGESDADFEATMQLVRDIGFAIAYSFKYS 351
[Close]
BLAST of mRNA_L-digitata_M_contig98404.1.1 vs. uniprot
Match: A0A0F2RM55_9PROT (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Hyphomonas sp. BRH_c22 TaxID=1629710 RepID=A0A0F2RM55_9PROT)

HSP 1 Score: 566 bits (1459), Expect = 1.410e-200
Identity = 277/322 (86.02%), Postives = 297/322 (92.24%), Query Frame = 0 
Query:    1 MRDVLRPLGYAPVDTPEAADLVVLNTCHIREKATEKVYSELGQLKRMKRKTGRNMTIAVAGCVAQAEGEEIMRRQPLVDLVLGPQAYHKLPEMIARASRAVGDRLETEFDTLEKFDALPKVREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDIVMEARNLAAQGVREITLLGQNVNAFHGAAPAVEGGDDWTLGQLCRHIAKIGGIERIRYTTSHPRDMEDDLIAAHGDTPQMQPFLHLPVQSGSDRILKAMNRSHTADAYREIIRKVRAAQPDIAIASDFIVGFPGESDEDFEATMQLVRDVNYAVAYSFKYS 322
            MRDVLRPLGYAPVD PE ADLVV+NTCHIREKATEKVYSELGQLK+MK  +G  MTIAVAGCVAQAEGEE++RRQP VDLVLGPQAYHKLPEMIARASRAVGDRLETEFDT EKFDALPK R+ DGP AFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDI++EAR+LAAQGVREI+LLGQNVNAFHGAAPA+EGG DWTLGQLCRHIAKIGGI+RIRYTTSHPRDM+DDLIAAHGDTP M PFLHLPVQSGSDRILKAMNR HTA  + EII KVR  +P IA+ASDFIVGFPGE+DEDFEATM+LVR   +A+AYSFKYS
Sbjct:   30 MRDVLRPLGYAPVDGPEHADLVVVNTCHIREKATEKVYSELGQLKKMKEASGGRMTIAVAGCVAQAEGEELIRRQPAVDLVLGPQAYHKLPEMIARASRAVGDRLETEFDTQEKFDALPKARDVDGPAAFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDIIVEARSLAAQGVREISLLGQNVNAFHGAAPAIEGGPDWTLGQLCRHIAKIGGIDRIRYTTSHPRDMDDDLIAAHGDTPAMMPFLHLPVQSGSDRILKAMNRGHTAAEFHEIIAKVRTVRPGIALASDFIVGFPGETDEDFEATMELVRKTGFAIAYSFKYS 351
[Close]
BLAST of mRNA_L-digitata_M_contig98404.1.1 vs. uniprot
Match: A0A059G4D5_9PROT (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=2 Tax=Hyphomonas TaxID=85 RepID=A0A059G4D5_9PROT)

HSP 1 Score: 561 bits (1445), Expect = 1.900e-198
Identity = 277/322 (86.02%), Postives = 293/322 (90.99%), Query Frame = 0 
Query:    1 MRDVLRPLGYAPVDTPEAADLVVLNTCHIREKATEKVYSELGQLKRMKRKTGRNMTIAVAGCVAQAEGEEIMRRQPLVDLVLGPQAYHKLPEMIARASRAVGDRLETEFDTLEKFDALPKVREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDIVMEARNLAAQGVREITLLGQNVNAFHGAAPAVEGGDDWTLGQLCRHIAKIGGIERIRYTTSHPRDMEDDLIAAHGDTPQMQPFLHLPVQSGSDRILKAMNRSHTADAYREIIRKVRAAQPDIAIASDFIVGFPGESDEDFEATMQLVRDVNYAVAYSFKYS 322
            MRDVLRPLGYAPVD PE ADLVVLNTCHIREKATEKVYSELGQLK+MK  +G  MTIAVAGCVAQAEGEE++RRQP VDLVLGPQAYHKLPEMIAR SRAVGDRLETEF+TLEKFDALPK RE DGP AFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDIV EAR LAAQGVREITLLGQNVNAFHGAAP +EG  DWTLGQLCRHIAKIGGI+RIRY+TSHPRDM+DDLIAAHGDT  M PFLHLPVQSGSDRILKAMNR HTA  + EIIRKVRAA+PDI +ASDFIVGFPGE+D+DFEATM L+R   +A AYSFKYS
Sbjct:   30 MRDVLRPLGYAPVDGPEDADLVVLNTCHIREKATEKVYSELGQLKKMKEASGGRMTIAVAGCVAQAEGEELIRRQPAVDLVLGPQAYHKLPEMIARVSRAVGDRLETEFETLEKFDALPKAREVDGPAAFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDIVAEARGLAAQGVREITLLGQNVNAFHGAAPVLEGVADWTLGQLCRHIAKIGGIDRIRYSTSHPRDMDDDLIAAHGDTSAMMPFLHLPVQSGSDRILKAMNRGHTAADFHEIIRKVRAARPDIGLASDFIVGFPGETDDDFEATMDLIRQTGFATAYSFKYS 351
[Close]
BLAST of mRNA_L-digitata_M_contig98404.1.1 vs. uniprot
Match: A0A059FHN1_9PROT (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Hyphomonas johnsonii MHS-2 TaxID=1280950 RepID=A0A059FHN1_9PROT)

HSP 1 Score: 556 bits (1434), Expect = 8.940e-197
Identity = 270/322 (83.85%), Postives = 298/322 (92.55%), Query Frame = 0 
Query:    1 MRDVLRPLGYAPVDTPEAADLVVLNTCHIREKATEKVYSELGQLKRMKRKTGRNMTIAVAGCVAQAEGEEIMRRQPLVDLVLGPQAYHKLPEMIARASRAVGDRLETEFDTLEKFDALPKVREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDIVMEARNLAAQGVREITLLGQNVNAFHGAAPAVEGGDDWTLGQLCRHIAKIGGIERIRYTTSHPRDMEDDLIAAHGDTPQMQPFLHLPVQSGSDRILKAMNRSHTADAYREIIRKVRAAQPDIAIASDFIVGFPGESDEDFEATMQLVRDVNYAVAYSFKYS 322
            MRDVLRPLGYAPVD PE ADLVV+NTCHIREKATEKVYSELGQLK+MK  +G  MTIAVAGCVAQAEGEE++RRQP VDLVLGPQ+YHKLPEMIARASRAVGDRLETEF+TLEKFDALP+ R ADGPTAFLSVQEGCDKFCTFCVVPYTRGAE+SR VDDIVMEAR+LAAQGVREI+LLGQNVNA+HGAAPA++GG+DWTLGQLCRH+A+IGGI+RIRYTTSHPRDM+DDLIAAHGDT +M PFLHLPVQSGSDR+L AMNR HTA  +  II KVRAA+PDIA+ASDFIVGFPGE+D DF+ATM LVR   +A+AYSFKYS
Sbjct:   30 MRDVLRPLGYAPVDGPEQADLVVVNTCHIREKATEKVYSELGQLKKMKEASGGRMTIAVAGCVAQAEGEELIRRQPAVDLVLGPQSYHKLPEMIARASRAVGDRLETEFETLEKFDALPRERNADGPTAFLSVQEGCDKFCTFCVVPYTRGAEMSRRVDDIVMEARSLAAQGVREISLLGQNVNAYHGAAPAMDGGEDWTLGQLCRHVARIGGIDRIRYTTSHPRDMDDDLIAAHGDTQEMMPFLHLPVQSGSDRVLDAMNRGHTAADFHAIIAKVRAARPDIALASDFIVGFPGETDADFDATMDLVRATGFAIAYSFKYS 351
[Close]
BLAST of mRNA_L-digitata_M_contig98404.1.1 vs. uniprot
Match: UPI000A00C216 (tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB n=1 Tax=Henriciella litoralis TaxID=568102 RepID=UPI000A00C216)

HSP 1 Score: 554 bits (1428), Expect = 7.050e-196
Identity = 270/322 (83.85%), Postives = 297/322 (92.24%), Query Frame = 0 
Query:    1 MRDVLRPLGYAPVDTPEAADLVVLNTCHIREKATEKVYSELGQLKRMKRKTGRNMTIAVAGCVAQAEGEEIMRRQPLVDLVLGPQAYHKLPEMIARASRAVGDRLETEFDTLEKFDALPKVREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDIVMEARNLAAQGVREITLLGQNVNAFHGAAPAVEGGDDWTLGQLCRHIAKIGGIERIRYTTSHPRDMEDDLIAAHGDTPQMQPFLHLPVQSGSDRILKAMNRSHTADAYREIIRKVRAAQPDIAIASDFIVGFPGESDEDFEATMQLVRDVNYAVAYSFKYS 322
            MRDVLRPLGY PVDT + ADLVVLNTCHIREKATEKVYSELGQ+K+MK+ +G  MTIAVAGCVAQAEG EIMRRQP VDLVLGPQAYHKLPEM+ARASRA G+RLETEF+TLEKFDALPK READGPTAFLSVQEGCDKFCTFCVVPYTRGAELSR VDDIVMEARNLAAQGVRE+TLLGQNVNA+HGAAP +EGG +W L QL RHIAKIGGI+RIRY+TSHPRDM+ DLIAAHGDTP+M PF+HLPVQSGSDRILKAMNR HTA+ Y +I+R+++ AQPDIA+ASDFIVGFPGESD+DFE TM LVR+V YA+AYSFKYS
Sbjct:   30 MRDVLRPLGYQPVDTADNADLVVLNTCHIREKATEKVYSELGQIKKMKQASGGKMTIAVAGCVAQAEGAEIMRRQPAVDLVLGPQAYHKLPEMVARASRAAGERLETEFETLEKFDALPKTREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRPVDDIVMEARNLAAQGVREVTLLGQNVNAWHGAAPKLEGGSEWGLSQLSRHIAKIGGIDRIRYSTSHPRDMDADLIAAHGDTPEMMPFMHLPVQSGSDRILKAMNRGHTAEHYLDIMRQLKEAQPDIALASDFIVGFPGESDQDFEDTMNLVREVGYAIAYSFKYS 351
[Close]
BLAST of mRNA_L-digitata_M_contig98404.1.1 vs. uniprot
Match: A0A399RMY1_9PROT (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=8 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A399RMY1_9PROT)

HSP 1 Score: 550 bits (1417), Expect = 3.320e-194
Identity = 267/322 (82.92%), Postives = 295/322 (91.61%), Query Frame = 0 
Query:    1 MRDVLRPLGYAPVDTPEAADLVVLNTCHIREKATEKVYSELGQLKRMKRKTGRNMTIAVAGCVAQAEGEEIMRRQPLVDLVLGPQAYHKLPEMIARASRAVGDRLETEFDTLEKFDALPKVREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDIVMEARNLAAQGVREITLLGQNVNAFHGAAPAVEGGDDWTLGQLCRHIAKIGGIERIRYTTSHPRDMEDDLIAAHGDTPQMQPFLHLPVQSGSDRILKAMNRSHTADAYREIIRKVRAAQPDIAIASDFIVGFPGESDEDFEATMQLVRDVNYAVAYSFKYS 322
            MRDVLRPLGY PVD PE ADLVVLNTCHIREKATEKVYSELGQ+K+MK   G  MTIAVAGCVAQAEG EIMRRQP VDLVLGPQAYHKLPEM+ARASRA GDRLETEF+TLEKFDALPK READGP AFLSVQEGCDKFCTFCVVPYTRGAELSR VDDIVMEAR+LAAQGVR+I+LLGQNVNA+HGAAP +EGG +W LGQL RH++KIGGI+RIRYTTSHPRDM+DDLIAAHG+ P++ PFLHLPVQSGSDRILKAMNR HTA+ Y +I+R++R A+PD+A+ASDFIVGFPGESD+DFE TM LVR+V YA+AYSFKYS
Sbjct:   30 MRDVLRPLGYQPVDGPETADLVVLNTCHIREKATEKVYSELGQIKKMKEAAGGKMTIAVAGCVAQAEGAEIMRRQPAVDLVLGPQAYHKLPEMVARASRAAGDRLETEFETLEKFDALPKQREADGPAAFLSVQEGCDKFCTFCVVPYTRGAELSRPVDDIVMEARSLAAQGVRDISLLGQNVNAWHGAAPKLEGGGEWGLGQLARHLSKIGGIDRIRYTTSHPRDMDDDLIAAHGEVPELMPFLHLPVQSGSDRILKAMNRGHTAEHYLDIMRRMRDARPDMALASDFIVGFPGESDQDFEDTMNLVREVGYAIAYSFKYS 351
[Close]
BLAST of mRNA_L-digitata_M_contig98404.1.1 vs. uniprot
Match: A0A399QY40_9PROT (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Henriciella barbarensis TaxID=86342 RepID=A0A399QY40_9PROT)

HSP 1 Score: 549 bits (1414), Expect = 9.500e-194
Identity = 266/322 (82.61%), Postives = 296/322 (91.93%), Query Frame = 0 
Query:    1 MRDVLRPLGYAPVDTPEAADLVVLNTCHIREKATEKVYSELGQLKRMKRKTGRNMTIAVAGCVAQAEGEEIMRRQPLVDLVLGPQAYHKLPEMIARASRAVGDRLETEFDTLEKFDALPKVREADGPTAFLSVQEGCDKFCTFCVVPYTRGAELSRSVDDIVMEARNLAAQGVREITLLGQNVNAFHGAAPAVEGGDDWTLGQLCRHIAKIGGIERIRYTTSHPRDMEDDLIAAHGDTPQMQPFLHLPVQSGSDRILKAMNRSHTADAYREIIRKVRAAQPDIAIASDFIVGFPGESDEDFEATMQLVRDVNYAVAYSFKYS 322
            MRDVLRPLGY PVD PE ADLVVLNTCHIREKATEKVYSELGQ+K+MK  +G  MTIAVAGCVAQAEG EIMRRQP VDLVLGPQAYHKLPEM+ARASRA GDRLETEF+TLEKFDALPK READGP AFLSVQEGCDKFCTFCVVPYTRGAELSR VDDIV+EAR+LAAQGVR+I+LLGQNVNA+HGAAP +EGG +W LGQL RH++KIGGI+RIRYTTSHPRDM+DDLIAAHG+ P++ PFLHLPVQSGSDRILKAMNR HTA+ Y +I+R++R A+PD+A+ASDFIVGFPGESD+DFE TM LVR+V YA+AYSFKYS
Sbjct:   30 MRDVLRPLGYQPVDGPETADLVVLNTCHIREKATEKVYSELGQIKKMKEASGGKMTIAVAGCVAQAEGAEIMRRQPAVDLVLGPQAYHKLPEMVARASRATGDRLETEFETLEKFDALPKQREADGPAAFLSVQEGCDKFCTFCVVPYTRGAELSRPVDDIVVEARSLAAQGVRDISLLGQNVNAWHGAAPKLEGGGEWGLGQLARHLSKIGGIDRIRYTTSHPRDMDDDLIAAHGEVPELMPFLHLPVQSGSDRILKAMNRGHTAEHYLDIMRRMRDARPDMALASDFIVGFPGESDQDFEDTMNLVREVGYAIAYSFKYS 351
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98404.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A059EAD1_9PROT1.340e-21994.10tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A062UBT2_9PROT8.990e-21191.61tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
MIAB_HYPNA1.380e-20586.96tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A0F2QBH4_9PROT2.830e-20186.96tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A0F2RM55_9PROT1.410e-20086.02tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A059G4D5_9PROT1.900e-19886.02tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A059FHN1_9PROT8.940e-19783.85tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
UPI000A00C2167.050e-19683.85tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot... [more]
A0A399RMY1_9PROT3.320e-19482.92tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A399QY40_9PROT9.500e-19482.61tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006638Elp3/MiaB/NifBSMARTSM00729MiaBcoord: 127..322
e-value: 4.4E-38
score: 142.5
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 132..308
e-value: 3.5E-28
score: 99.1
IPR007197Radical SAMSFLDSFLDS00029Radical_SAMcoord: 1..322
e-value: 0.0
score: 392.9
IPR007197Radical SAMPROSITEPS51918RADICAL_SAMcoord: 123..322
score: 33.679878
NoneNo IPR availableTIGRFAMTIGR01574TIGR01574coord: 1..322
e-value: 1.1E-119
score: 398.2
NoneNo IPR availablePIRSRPIRSR000167-2PIRSR000167-2coord: 137..147
e-value: 810.0
score: -3.1
NoneNo IPR availableSFLDSFLDG01082B12-binding_domain_containingcoord: 46..310
e-value: 9.2E-31
score: 101.6
NoneNo IPR availablePIRSRPIRSR000167-1PIRSR000167-1coord: 137..147
e-value: 810.0
score: -3.1
coord: 247..312
e-value: 2.2E-6
score: 25.0
NoneNo IPR availablePANTHERPTHR43020CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1coord: 2..322
NoneNo IPR availableCDDcd01335Radical_SAMcoord: 131..320
e-value: 1.68238E-5
score: 43.091
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 103..322
IPR005839MethylthiotransferaseTIGRFAMTIGR00089TIGR00089coord: 1..322
e-value: 8.2E-112
score: 372.1
IPR005839MethylthiotransferaseSFLDSFLDG01061methylthiotransferasecoord: 1..322
e-value: 0.0
score: 392.9
IPR023404Radical SAM, alpha/beta horseshoeGENE3D3.80.30.20tm_1862 like domaincoord: 125..322
e-value: 2.8E-71
score: 241.7
IPR013848Methylthiotransferase, N-terminalPFAMPF00919UPF0004coord: 1..83
e-value: 4.2E-21
score: 74.8
IPR013848Methylthiotransferase, N-terminalPROSITEPS51449MTTASE_Ncoord: 1..99
score: 28.322144
IPR038135Methylthiotransferase, N-terminal domain superfamilyGENE3D3.40.50.12160coord: 1..117
e-value: 2.8E-27
score: 96.9
IPR020612Methylthiotransferase, conserved sitePROSITEPS01278MTTASE_RADICALcoord: 131..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98404contigL-digitata_M_contig98404:3..968 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98404.1.1mRNA_L-digitata_M_contig98404.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98404 3..968 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98404.1.1 ID=prot_L-digitata_M_contig98404.1.1|Name=mRNA_L-digitata_M_contig98404.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=322bp
MRDVLRPLGYAPVDTPEAADLVVLNTCHIREKATEKVYSELGQLKRMKRK
TGRNMTIAVAGCVAQAEGEEIMRRQPLVDLVLGPQAYHKLPEMIARASRA
VGDRLETEFDTLEKFDALPKVREADGPTAFLSVQEGCDKFCTFCVVPYTR
GAELSRSVDDIVMEARNLAAQGVREITLLGQNVNAFHGAAPAVEGGDDWT
LGQLCRHIAKIGGIERIRYTTSHPRDMEDDLIAAHGDTPQMQPFLHLPVQ
SGSDRILKAMNRSHTADAYREIIRKVRAAQPDIAIASDFIVGFPGESDED
FEATMQLVRDVNYAVAYSFKYS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006638Elp3/MiaB/NifB
IPR007197rSAM
IPR005839Methylthiotransferase
IPR023404rSAM_horseshoe
IPR013848Methylthiotransferase_N
IPR038135Methylthiotransferase_N_sf
IPR020612Methylthiotransferase_CS