prot_L-digitata_M_contig98175.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98175.2.1
Unique Nameprot_L-digitata_M_contig98175.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length122
Homology
BLAST of mRNA_L-digitata_M_contig98175.2.1 vs. uniprot
Match: A0A2D8PR92_9PROT (Phytanoyl-CoA dioxygenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PR92_9PROT)

HSP 1 Score: 203 bits (516), Expect = 9.510e-64
Identity = 96/121 (79.34%), Postives = 105/121 (86.78%), Query Frame = 0
Query:    1 FFITATVIVAPATIENGCLELAHWDHRAALVGDLWEPLEGDQLEGVEFVAYPGEPGDVLFFDSYLPHRSAPNLTSDPRRVLYVTYNKVSEGDRREQYYADKRASYPPDIERDADREYAYRV 121
            ++ITATVIV  AT ENGCLELA W+HR ALVGDLW+PL GDQL G+EFV+ PGEPGDVLFFDSYLPH+SAPN TSDPRRVLYVTYN+ S+GD R QYYADKRASYPPDIER    EYAYRV
Sbjct:  133 YYITATVIVDRATEENGCLELAKWNHRHALVGDLWKPLGGDQLSGIEFVSCPGEPGDVLFFDSYLPHQSAPNGTSDPRRVLYVTYNRASDGDHRAQYYADKRASYPPDIERXQGEEYAYRV 253          
BLAST of mRNA_L-digitata_M_contig98175.2.1 vs. uniprot
Match: A0A2W2BB21_9HYPH (Phytanoyl-CoA dioxygenase family protein n=2 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2BB21_9HYPH)

HSP 1 Score: 165 bits (418), Expect = 5.880e-49
Identity = 73/121 (60.33%), Postives = 91/121 (75.21%), Query Frame = 0
Query:    1 FFITATVIVAPATIENGCLELAHWDHRAALVGDLWEPLEGDQLEGVEFVAYPGEPGDVLFFDSYLPHRSAPNLTSDPRRVLYVTYNKVSEGDRREQYYADKRASYPPDIERDADREYAYRV 121
            F +TA V V P TIENGCLE+    H   L+GDLW PL  +Q++G++FVA P  PGD +FFDSY PHRSAPN+T  PRRVLY+TYN+ ++GD REQYYADKR S+PPD ER+  + Y Y+V
Sbjct:  129 FHLTAMVSVDPCTIENGCLEMVSGHHDRGLIGDLWAPLNAEQMQGMDFVAVPTAPGDAIFFDSYAPHRSAPNVTGKPRRVLYITYNRAADGDWREQYYADKRRSFPPDCEREPGKVYEYKV 249          
BLAST of mRNA_L-digitata_M_contig98175.2.1 vs. uniprot
Match: A0A1Y0RJV7_9CYAN (Phytanoyl-CoA dioxygenase n=1 Tax=Nostocales cyanobacterium HT-58-2 TaxID=1940762 RepID=A0A1Y0RJV7_9CYAN)

HSP 1 Score: 163 bits (413), Expect = 3.750e-48
Identity = 71/120 (59.17%), Postives = 93/120 (77.50%), Query Frame = 0
Query:    2 FITATVIVAPATIENGCLELAHWDHRAALVGDLWEPLEGDQLEGVEFVAYPGEPGDVLFFDSYLPHRSAPNLTSDPRRVLYVTYNKVSEGDRREQYYADKRASYPPDIERDADREYAYRV 121
            FIT  + +  +T+ENGCLELA   H+  L+G+LW+PL  + ++G+EF+  P +PGD +FFDSY PHRS PNLT  PRRVLY+TYN+ SEGD R QYYADKR SYPPDIER+ D++Y ++V
Sbjct:  134 FITVLITIDESTVENGCLELAVGYHQRGLIGELWKPLTEENIKGMEFIPVPAKPGDAVFFDSYAPHRSGPNLTGHPRRVLYLTYNRRSEGDHRLQYYADKRKSYPPDIEREPDKKYVFKV 253          
BLAST of mRNA_L-digitata_M_contig98175.2.1 vs. uniprot
Match: A0A1Z4IYI7_9CYAN (Uncharacterized protein n=1 Tax=Scytonema sp. HK-05 TaxID=1137095 RepID=A0A1Z4IYI7_9CYAN)

HSP 1 Score: 160 bits (405), Expect = 6.060e-47
Identity = 69/120 (57.50%), Postives = 91/120 (75.83%), Query Frame = 0
Query:    2 FITATVIVAPATIENGCLELAHWDHRAALVGDLWEPLEGDQLEGVEFVAYPGEPGDVLFFDSYLPHRSAPNLTSDPRRVLYVTYNKVSEGDRREQYYADKRASYPPDIERDADREYAYRV 121
            FIT  + +  +T+ENGCLELA   H+  L+G+LW+PL  + ++ +EF+  P +PGD +FFDSY PHRS PNLT  PRRVLY+TYN+ SEGD R QYYADKR SYPPDIER+  ++Y ++V
Sbjct:  134 FITVLISIDESTVENGCLELAVGHHQRGLIGELWKPLTEENIQDMEFIPVPAKPGDAVFFDSYAPHRSGPNLTGHPRRVLYLTYNRASEGDHRLQYYADKRKSYPPDIEREVGKKYVFKV 253          
BLAST of mRNA_L-digitata_M_contig98175.2.1 vs. uniprot
Match: A0A1Q7MXP8_9BACT (Uncharacterized protein n=4 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A1Q7MXP8_9BACT)

HSP 1 Score: 157 bits (398), Expect = 7.300e-46
Identity = 70/121 (57.85%), Postives = 89/121 (73.55%), Query Frame = 0
Query:    1 FFITATVIVAPATIENGCLELAHWDHRAALVGDLWEPLEGDQLEGVEFVAYPGEPGDVLFFDSYLPHRSAPNLTSDPRRVLYVTYNKVSEGDRREQYYADKRASYPPDIERDADREYAYRV 121
            +FI+  + + P T ENGCLELA   H   L+G  WEPLEG +L+GVEF+AYP EPGD  FFD ++PH+S PNL+  PRR +Y+TYN+ S+GD RE+Y+ADKR SYPPD ERD    Y +RV
Sbjct:  135 YFISVLIAIDPNTAENGCLELASGHHTRGLIGRRWEPLEGHELDGVEFIAYPMEPGDAAFFDCFVPHQSKPNLSDHPRRNIYLTYNRASDGDFRERYFADKRKSYPPDHERDPAAMYVFRV 255          
BLAST of mRNA_L-digitata_M_contig98175.2.1 vs. uniprot
Match: UPI001B33D4F2 (phytanoyl-CoA dioxygenase family protein n=1 Tax=Brasilonema sp. CT11 TaxID=2748322 RepID=UPI001B33D4F2)

HSP 1 Score: 156 bits (395), Expect = 1.910e-45
Identity = 68/120 (56.67%), Postives = 91/120 (75.83%), Query Frame = 0
Query:    2 FITATVIVAPATIENGCLELAHWDHRAALVGDLWEPLEGDQLEGVEFVAYPGEPGDVLFFDSYLPHRSAPNLTSDPRRVLYVTYNKVSEGDRREQYYADKRASYPPDIERDADREYAYRV 121
            FIT  + +  +T+ENGCLELA   H+  L+G+LW+ L  + ++ +EF+  P +PGD +FFDSY PHRS PNLT+D RRVLY+TYN+ SEGD R QYYADKR SYPPDIER  +++Y ++V
Sbjct:  133 FITVLISIDESTVENGCLELAGGYHQRGLIGELWKALTEENIQDMEFIPIPAKPGDAVFFDSYAPHRSRPNLTTDARRVLYLTYNRASEGDHRLQYYADKRKSYPPDIERQPEKKYVFKV 252          
BLAST of mRNA_L-digitata_M_contig98175.2.1 vs. uniprot
Match: A0A523MH05_9GAMM (Phytanoyl-CoA dioxygenase family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523MH05_9GAMM)

HSP 1 Score: 156 bits (395), Expect = 1.960e-45
Identity = 74/119 (62.18%), Postives = 88/119 (73.95%), Query Frame = 0
Query:    3 ITATVIVAPATIENGCLELAHWDHRAALVGDLWEPLEGDQLEGVEFVAYPGEPGDVLFFDSYLPHRSAPNLTSDPRRVLYVTYNKVSEGDRREQYYADKRASYPPDIERDADREYAYRV 121
            IT+ V +   TIENGCLE+A       L+GD W PL  + L G+EFV    EPGDV+FFDS++PH+SAPN ++ PRRVLY TYNK SEGD   QYYADKRASYPPDIER+A +EY YRV
Sbjct:  135 ITSLVTIDRTTIENGCLEIARGFRGQDLIGDEWTPLTDESLAGIEFVPVESEPGDVVFFDSFIPHQSAPNRSAAPRRVLYYTYNKASEGDHLAQYYADKRASYPPDIEREAGKEYHYRV 253          
BLAST of mRNA_L-digitata_M_contig98175.2.1 vs. uniprot
Match: A0A6A7KWF1_9PROT (Phytanoyl-CoA dioxygenase family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KWF1_9PROT)

HSP 1 Score: 155 bits (393), Expect = 2.060e-45
Identity = 71/121 (58.68%), Postives = 91/121 (75.21%), Query Frame = 0
Query:    1 FFITATVIVAPATIENGCLELAHWDHRAALVGDLWEPLEGDQLEGVEFVAYPGEPGDVLFFDSYLPHRSAPNLTSDPRRVLYVTYNKVSEGDRREQYYADKRASYPPDIERDADREYAYRV 121
            FF+TA V +  AT+ENGCLEL    H   L+G+ W+P+  +Q   ++ VAYP +PGDV+FFDSY PH S PN+T   RRVLYVTYN+ ++GD R +YYADKRASYPPDIERD ++EY +RV
Sbjct:  110 FFVTALVSIDEATLENGCLELVAGYHDKGLIGEEWKPISDEQNAAMKPVAYPTKPGDVVFFDSYAPHGSGPNMTGRKRRVLYVTYNRKADGDHRAKYYADKRASYPPDIERDPNKEYRFRV 230          
BLAST of mRNA_L-digitata_M_contig98175.2.1 vs. uniprot
Match: A0A845Y328_9CYAN (Phytanoyl-CoA dioxygenase family protein n=1 Tax=Symploca sp. SIO2G7 TaxID=2607798 RepID=A0A845Y328_9CYAN)

HSP 1 Score: 155 bits (391), Expect = 7.870e-45
Identity = 71/121 (58.68%), Postives = 93/121 (76.86%), Query Frame = 0
Query:    1 FFITATVIVAPATIENGCLELAHWDHRAALVGDLWEPLEGDQLEGVEFVAYPGEPGDVLFFDSYLPHRSAPNLTSDPRRVLYVTYNKVSEGDRREQYYADKRASYPPDIERDADREYAYRV 121
            FFITA V V  +T+ENGCLE+A   ++  L+G+LW+ L  + ++G+EF A P +PGD +FFDSY PHRS PNLT  PRRVLY+TYN+ SEGD R QYY DKR +YPPDIER+A ++Y ++V
Sbjct:  134 FFITALVSVDESTVENGCLEMAPGFNQG-LIGELWKQLSEENMKGMEFSAVPTKPGDAVFFDSYAPHRSGPNLTKSPRRVLYLTYNRASEGDHRVQYYVDKRKNYPPDIEREAGKKYEFKV 253          
BLAST of mRNA_L-digitata_M_contig98175.2.1 vs. uniprot
Match: A0A849MEC2_9PROT (Phytanoyl-CoA dioxygenase family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A849MEC2_9PROT)

HSP 1 Score: 154 bits (390), Expect = 1.030e-44
Identity = 73/119 (61.34%), Postives = 90/119 (75.63%), Query Frame = 0
Query:    3 ITATVIVAPATIENGCLELAHWDHRAALVGDLWEPLEGDQLEGVEFVAYPGEPGDVLFFDSYLPHRSAPNLTSDPRRVLYVTYNKVSEGDRREQYYADKRASYPPDIERDADREYAYRV 121
            ITA V V  +TIENGCLE+A+  +   L+G+ W PLE D   G+++VA P EPGD +FFDSY PHRS PNLT+D RRVLYVTYN  +EGD R QYY DKR SYPPD+ER+ ++EY +RV
Sbjct:  135 ITALVSVDASTIENGCLEVANGFNNKGLIGEQWAPLEED---GLDYVALPTEPGDAVFFDSYAPHRSKPNLTNDKRRVLYVTYNAAAEGDHRRQYYDDKRLSYPPDVERETNKEYVFRV 250          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98175.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8PR92_9PROT9.510e-6479.34Phytanoyl-CoA dioxygenase n=1 Tax=Rhodospirillacea... [more]
A0A2W2BB21_9HYPH5.880e-4960.33Phytanoyl-CoA dioxygenase family protein n=2 Tax=A... [more]
A0A1Y0RJV7_9CYAN3.750e-4859.17Phytanoyl-CoA dioxygenase n=1 Tax=Nostocales cyano... [more]
A0A1Z4IYI7_9CYAN6.060e-4757.50Uncharacterized protein n=1 Tax=Scytonema sp. HK-0... [more]
A0A1Q7MXP8_9BACT7.300e-4657.85Uncharacterized protein n=4 Tax=unclassified Acido... [more]
UPI001B33D4F21.910e-4556.67phytanoyl-CoA dioxygenase family protein n=1 Tax=B... [more]
A0A523MH05_9GAMM1.960e-4562.18Phytanoyl-CoA dioxygenase family protein n=1 Tax=G... [more]
A0A6A7KWF1_9PROT2.060e-4558.68Phytanoyl-CoA dioxygenase family protein n=1 Tax=A... [more]
A0A845Y328_9CYAN7.870e-4558.68Phytanoyl-CoA dioxygenase family protein n=1 Tax=S... [more]
A0A849MEC2_9PROT1.030e-4461.34Phytanoyl-CoA dioxygenase family protein n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008775Phytanoyl-CoA dioxygenasePFAMPF05721PhyHcoord: 3..80
e-value: 1.4E-9
score: 38.5
NoneNo IPR availableGENE3D2.60.120.620q2cbj1_9rhob like domaincoord: 1..116
e-value: 5.8E-20
score: 73.2
NoneNo IPR availablePANTHERPTHR20883PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1coord: 4..100
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 3..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98175contigL-digitata_M_contig98175:604..969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98175.2.1mRNA_L-digitata_M_contig98175.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98175 604..969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98175.2.1 ID=prot_L-digitata_M_contig98175.2.1|Name=mRNA_L-digitata_M_contig98175.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=122bp
FFITATVIVAPATIENGCLELAHWDHRAALVGDLWEPLEGDQLEGVEFVA
YPGEPGDVLFFDSYLPHRSAPNLTSDPRRVLYVTYNKVSEGDRREQYYAD
KRASYPPDIERDADREYAYRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008775Phytyl_CoA_dOase