prot_L-digitata_M_contig98165.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98165.2.1
Unique Nameprot_L-digitata_M_contig98165.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length57
Homology
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BLAST of mRNA_L-digitata_M_contig98165.2.1 vs. uniprot
Match: R7Q5K7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5K7_CHOCR)

HSP 1 Score: 111 bits (277), Expect = 2.270e-29
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:    1 MQGLTERQRQILDFITKRIQDQGYPPTIREIGEEMGIKSTNGVNDHLKALERKGYL 56
            MQGLT+RQRQILDFIT RIQ+QGYPPTIREIGEEMGIKSTNGVNDHLKALERKGYL
Sbjct:    1 MQGLTDRQRQILDFITHRIQEQGYPPTIREIGEEMGIKSTNGVNDHLKALERKGYL 56
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BLAST of mRNA_L-digitata_M_contig98165.2.1 vs. uniprot
Match: A0A2N2IJD2_9DELT (Repressor LexA (Fragment) n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20 TaxID=2013748 RepID=A0A2N2IJD2_9DELT)

HSP 1 Score: 95.1 bits (235), Expect = 9.850e-24
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 0 
Query:    1 MQGLTERQRQILDFITKRIQDQGYPPTIREIGEEMGIKSTNGVNDHLKALERKGYL 56
            MQGLT RQ+Q+LDFI + I D+GYPPT+REIG  MGI+STNGVNDHL+ALERKGYL
Sbjct:    1 MQGLTHRQQQVLDFIRESITDRGYPPTLREIGAHMGIRSTNGVNDHLRALERKGYL 56
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BLAST of mRNA_L-digitata_M_contig98165.2.1 vs. uniprot
Match: A0A7X7GVM7_9DELT (LexA repressor n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X7GVM7_9DELT)

HSP 1 Score: 97.1 bits (240), Expect = 1.030e-23
Identity = 44/57 (77.19%), Postives = 52/57 (91.23%), Query Frame = 0 
Query:    1 MQGLTERQRQILDFITKRIQDQGYPPTIREIGEEMGIKSTNGVNDHLKALERKGYLK 57
            MQGLT+RQ Q L+FI K I+D+GYPPT+REIGE MGI+STNGVNDHL+ALERKGYL+
Sbjct:    1 MQGLTKRQEQTLEFIRKSIRDRGYPPTLREIGEHMGIRSTNGVNDHLRALERKGYLR 57
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BLAST of mRNA_L-digitata_M_contig98165.2.1 vs. uniprot
Match: A0A4Q5X9S1_9DELT (LexA repressor n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A4Q5X9S1_9DELT)

HSP 1 Score: 97.1 bits (240), Expect = 1.180e-23
Identity = 44/56 (78.57%), Postives = 51/56 (91.07%), Query Frame = 0 
Query:    1 MQGLTERQRQILDFITKRIQDQGYPPTIREIGEEMGIKSTNGVNDHLKALERKGYL 56
            MQGLT+RQ Q LDFI + I+D+GYPPT+REIGE MGI+STNGVNDHL+ALERKGYL
Sbjct:    1 MQGLTKRQEQTLDFIRQSIEDRGYPPTLREIGEHMGIRSTNGVNDHLRALERKGYL 56
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BLAST of mRNA_L-digitata_M_contig98165.2.1 vs. uniprot
Match: A0A2W4LRZ0_9PROT (LexA repressor n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4LRZ0_9PROT)

HSP 1 Score: 96.3 bits (238), Expect = 2.200e-23
Identity = 44/57 (77.19%), Postives = 52/57 (91.23%), Query Frame = 0 
Query:    1 MQGLTERQRQILDFITKRIQDQGYPPTIREIGEEMGIKSTNGVNDHLKALERKGYLK 57
            MQGLT+RQ Q L+FI K I+++GYPPT+REIGE MGIKSTNGVNDHL+ALERKGYL+
Sbjct:    1 MQGLTKRQEQTLEFIRKSIEERGYPPTLREIGEYMGIKSTNGVNDHLRALERKGYLR 57
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BLAST of mRNA_L-digitata_M_contig98165.2.1 vs. uniprot
Match: A0A1W9QEK4_9DELT (LexA repressor n=1 Tax=Sorangiineae bacterium NIC37A_2 TaxID=1970199 RepID=A0A1W9QEK4_9DELT)

HSP 1 Score: 94.7 bits (234), Expect = 9.530e-23
Identity = 43/57 (75.44%), Postives = 51/57 (89.47%), Query Frame = 0 
Query:    1 MQGLTERQRQILDFITKRIQDQGYPPTIREIGEEMGIKSTNGVNDHLKALERKGYLK 57
            MQGLT+RQ Q L+FI   I+D+GYPPT+REIGE MGI+STNGVNDHL+ALERKGYL+
Sbjct:    1 MQGLTKRQEQTLEFIRASIRDRGYPPTLREIGEHMGIRSTNGVNDHLRALERKGYLR 57
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BLAST of mRNA_L-digitata_M_contig98165.2.1 vs. uniprot
Match: A0A534PLD2_9DELT (LexA repressor n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534PLD2_9DELT)

HSP 1 Score: 94.7 bits (234), Expect = 1.040e-22
Identity = 45/53 (84.91%), Postives = 47/53 (88.68%), Query Frame = 0 
Query:    4 LTERQRQILDFITKRIQDQGYPPTIREIGEEMGIKSTNGVNDHLKALERKGYL 56
            LTERQ +IL FI K IQDQGYPPTIREIGE  GI+STNGVNDHLKALERKGYL
Sbjct:    5 LTERQEKILSFIKKSIQDQGYPPTIREIGEHFGIRSTNGVNDHLKALERKGYL 57
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BLAST of mRNA_L-digitata_M_contig98165.2.1 vs. uniprot
Match: A0A1V5XEF3_9DELT (LexA repressor n=1 Tax=Deltaproteobacteria bacterium ADurb.Bin207 TaxID=1852869 RepID=A0A1V5XEF3_9DELT)

HSP 1 Score: 94.0 bits (232), Expect = 1.630e-22
Identity = 42/56 (75.00%), Postives = 50/56 (89.29%), Query Frame = 0 
Query:    1 MQGLTERQRQILDFITKRIQDQGYPPTIREIGEEMGIKSTNGVNDHLKALERKGYL 56
            MQGLT RQ+Q+LDFI + I ++GYPPT+REIG  MGI+STNGVNDHL+ALERKGYL
Sbjct:    1 MQGLTHRQQQVLDFIRESISERGYPPTLREIGAHMGIRSTNGVNDHLRALERKGYL 56
[Close]
BLAST of mRNA_L-digitata_M_contig98165.2.1 vs. uniprot
Match: A0A7Y5DZS9_9DELT (LexA repressor n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5DZS9_9DELT)

HSP 1 Score: 94.0 bits (232), Expect = 1.740e-22
Identity = 42/56 (75.00%), Postives = 50/56 (89.29%), Query Frame = 0 
Query:    1 MQGLTERQRQILDFITKRIQDQGYPPTIREIGEEMGIKSTNGVNDHLKALERKGYL 56
            MQGLT+RQ+ +LDFI + I D+GYPPT+REIG  MGI+STNGVNDHL+ALERKGYL
Sbjct:    1 MQGLTQRQQMVLDFIRQSITDRGYPPTLREIGARMGIRSTNGVNDHLRALERKGYL 56
[Close]
BLAST of mRNA_L-digitata_M_contig98165.2.1 vs. uniprot
Match: A0A2F0AT19_9DELT (LexA repressor n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2F0AT19_9DELT)

HSP 1 Score: 93.2 bits (230), Expect = 2.850e-22
Identity = 42/56 (75.00%), Postives = 51/56 (91.07%), Query Frame = 0 
Query:    1 MQGLTERQRQILDFITKRIQDQGYPPTIREIGEEMGIKSTNGVNDHLKALERKGYL 56
            M+GLT RQ++IL+FIT  + ++GYPPTIREIG +MGIKSTNGVNDHLKALERKG+L
Sbjct:    1 MKGLTNRQQEILEFITASLDERGYPPTIREIGTQMGIKSTNGVNDHLKALERKGFL 56
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98165.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q5K7_CHOCR2.270e-2994.64Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2N2IJD2_9DELT9.850e-2476.79Repressor LexA (Fragment) n=1 Tax=Deltaproteobacte... [more]
A0A7X7GVM7_9DELT1.030e-2377.19LexA repressor n=1 Tax=Myxococcales bacterium TaxI... [more]
A0A4Q5X9S1_9DELT1.180e-2378.57LexA repressor n=1 Tax=Myxococcales bacterium TaxI... [more]
A0A2W4LRZ0_9PROT2.200e-2377.19LexA repressor n=1 Tax=Proteobacteria bacterium Ta... [more]
A0A1W9QEK4_9DELT9.530e-2375.44LexA repressor n=1 Tax=Sorangiineae bacterium NIC3... [more]
A0A534PLD2_9DELT1.040e-2284.91LexA repressor n=1 Tax=Deltaproteobacteria bacteri... [more]
A0A1V5XEF3_9DELT1.630e-2275.00LexA repressor n=1 Tax=Deltaproteobacteria bacteri... [more]
A0A7Y5DZS9_9DELT1.740e-2275.00LexA repressor n=1 Tax=Polyangiaceae bacterium Tax... [more]
A0A2F0AT19_9DELT2.850e-2275.00LexA repressor n=1 Tax=Myxococcales bacterium TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..57
e-value: 5.7E-25
score: 89.0
IPR006199LexA repressor, DNA-binding domainPFAMPF01726LexA_DNA_bindcoord: 1..56
e-value: 8.5E-27
score: 92.7
NoneNo IPR availablePANTHERPTHR33516LEXA REPRESSORcoord: 1..57
NoneNo IPR availablePANTHERPTHR33516:SF2PROPHAGE REPRESSOR COHE-RELATEDcoord: 1..57
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 3..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98165contigL-digitata_M_contig98165:803..973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98165.2.1mRNA_L-digitata_M_contig98165.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98165 803..973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98165.2.1 ID=prot_L-digitata_M_contig98165.2.1|Name=mRNA_L-digitata_M_contig98165.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=57bp
MQGLTERQRQILDFITKRIQDQGYPPTIREIGEEMGIKSTNGVNDHLKAL
ERKGYLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR006199LexA_DNA-bd_dom
IPR036390WH_DNA-bd_sf