prot_L-digitata_M_contig9816.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9816.1.1
Unique Nameprot_L-digitata_M_contig9816.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length577
Homology
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BLAST of mRNA_L-digitata_M_contig9816.1.1 vs. uniprot
Match: D8LL17_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL17_ECTSI)

HSP 1 Score: 536 bits (1381), Expect = 5.300e-176
Identity = 336/576 (58.33%), Postives = 398/576 (69.10%), Query Frame = 0 
Query:   13 RSVGGNMAHTAATAALNAARAG----HTGAAGGAARKTGGSLGPEERPTASGWPRVSMSAVLDIAVNLFGPGXXXXXXXXEGRRSSTGNGAKLGAGSVGSXXXXXXXDEGLMTFTIDVPTGGSMSLGITVKELGGGAVFVEDLRKPPGQPPGPAEQAGVAIGDVIHGINYEPLEKGLRHTSALLAKAITLVGFVKLQISRVVSPGNRRKLLPGRDCPIVTELMWRTAQLRKAGVLTSGERYTIAGLVLRRMAWEEGTTMAPPEPPRTPAHLSFLTTAPVPSLLKSAATAQLDSLVLQVKGLREAIYVRCLHAKRDRFTVEPTKVSSVWGPPATGEAADSAAA--PAAPTPVN-RVTVLYVLRAEDVATGREWLVFPRYSDFSEIHQELLAMWPPIADLPFPPKRPVSTLLRGEPGVGAG----VVEERVVGLEAFLHGALALLGTYASLDPRCAGGLRLVQDFLGMPKGLVRAEAALSPALCDQKRGELLLYKLLNQADSPAARMKHFLMRDFDNELLIAPDVESLMKATSSRLGHLQEFVLEQHWEKLLSFMETSHVNGTSEAKEAAARKAVRRQ 577
            R   G+ A  AAT A+ A R G    + GAAGGA+R +     PE+ P  +    VSM+ +LDIAV+LFG G         GR S  G+G+   +G V S       +E L+TFT+DV TGGSM+LG+TVKELGGGAVFVED+RK PG   GPAE AG+ +GDVI GINYEPLEKGL HTS  LA+AI L GFVKLQISR V   + R+ LP +DC +V+ELMWRTAQLRKAG   S ER++IAGLVL+RMAWEEGT+       R  A L   TT PV S L+SAA+A LDSLVL+ KGLR+AI VRCLH    R  VE  +V SVWGP ++  A+  A A  P A TP + R TV +V+R EDV TGR+WLVFP Y D S + QELLAMWPPIADLPFP KR  S++ R      A     VVEERVV LEAFL GAL+LLG Y S+DPRC+G L +VQDFLG P+ L  A+ ALSPAL DQKR ELLLY+LLNQADSPAARMKH LMRDF+++  +APDV+SLMK  SSRL  LQ+FVL+ H E+L S   T     TSE +EA  RKAVRRQ
Sbjct:  147 RQRAGSAASIAATLAMAAVRRGDRPYYVGAAGGASRGS-----PEQTPQPT--EGVSMANLLDIAVSLFGSGDGAGGRG--GRHSIDGDGSSKSSGVVKSKKK----EEKLVTFTVDVHTGGSMTLGVTVKELGGGAVFVEDVRKLPGGSSGPAELAGILVGDVILGINYEPLEKGLVHTSTRLAEAIALAGFVKLQISRCVRSKSWRQSLPRKDCALVSELMWRTAQLRKAG---SAERHSIAGLVLQRMAWEEGTS-------RALAPL-LATTPPVDSSLESAASALLDSLVLEAKGLRKAIDVRCLHT---RTIVETVEVPSVWGPTSSEVASSDAKAAPPEAATPASTRATVRFVVRVEDVGTGRQWLVFPHYGDLSALRQELLAMWPPIADLPFPAKR--SSVSRAAAAETAETEETVVEERVVRLEAFLDGALSLLGMYVSIDPRCSGALHIVQDFLGRPEDLFNADLALSPALRDQKRAELLLYRLLNQADSPAARMKHLLMRDFESDTSLAPDVDSLMKCASSRLRRLQDFVLDHHEEQLSSCAYT-----TSETREAIVRKAVRRQ 688
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9816.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL17_ECTSI5.300e-17658.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 132..210
e-value: 0.0034
score: 26.6
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 114..214
e-value: 1.3E-5
score: 26.9
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 119..207
IPR001683Phox homologyPFAMPF00787PXcoord: 374..439
e-value: 7.6E-6
score: 26.5
IPR001683Phox homologyPROSITEPS50195PXcoord: 342..471
score: 10.490466
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 356..451
e-value: 3.5E-11
score: 44.6
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 361..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..117
NoneNo IPR availableCDDcd06093PX_domaincoord: 361..437
e-value: 6.26891E-9
score: 51.9747

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9816contigL-digitata_M_contig9816:789..8626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9816.1.1mRNA_L-digitata_M_contig9816.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9816 787..8626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9816.1.1 ID=prot_L-digitata_M_contig9816.1.1|Name=mRNA_L-digitata_M_contig9816.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=577bp
GGGGVAAAAAARRSVGGNMAHTAATAALNAARAGHTGAAGGAARKTGGSL
GPEERPTASGWPRVSMSAVLDIAVNLFGPGGGGGGGGDEGRRSSTGNGAK
LGAGSVGSGGGPGGHDEGLMTFTIDVPTGGSMSLGITVKELGGGAVFVED
LRKPPGQPPGPAEQAGVAIGDVIHGINYEPLEKGLRHTSALLAKAITLVG
FVKLQISRVVSPGNRRKLLPGRDCPIVTELMWRTAQLRKAGVLTSGERYT
IAGLVLRRMAWEEGTTMAPPEPPRTPAHLSFLTTAPVPSLLKSAATAQLD
SLVLQVKGLREAIYVRCLHAKRDRFTVEPTKVSSVWGPPATGEAADSAAA
PAAPTPVNRVTVLYVLRAEDVATGREWLVFPRYSDFSEIHQELLAMWPPI
ADLPFPPKRPVSTLLRGEPGVGAGVVEERVVGLEAFLHGALALLGTYASL
DPRCAGGLRLVQDFLGMPKGLVRAEAALSPALCDQKRGELLLYKLLNQAD
SPAARMKHFLMRDFDNELLIAPDVESLMKATSSRLGHLQEFVLEQHWEKL
LSFMETSHVNGTSEAKEAAARKAVRRQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf
IPR001683PX_dom
IPR036871PX_dom_sf