prot_L-digitata_M_contig9792.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9792.1.1
Unique Nameprot_L-digitata_M_contig9792.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length191
Homology
BLAST of mRNA_L-digitata_M_contig9792.1.1 vs. uniprot
Match: D8LT38_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT38_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 1.880e-56
Identity = 118/178 (66.29%), Postives = 142/178 (79.78%), Query Frame = 0
Query:    3 CKTLNSEGRGAQQRALMRVEGAAIHVQACVARGGAGRRLARAARERRDVERERAKVNWAASVIQTRRVTDESATRASKMALTRYYRCLDGLTGAEYYFDPKTGGSSWTKPKVLGKLDIPTVVVVPAGEEIMVPICRECEQEPATEXXXXXXXXXXXXXXANRLHATGNSTTHLRVTID 180
            C  + +EGRGA++RAL R+E AA+ VQACVARG +GR LAR A  RR++ R  A++NWAAS++QTR     + TRA+K+A+ RYYRCLDGLTGAEYYFDPKTG SSWTKPK+LGK DI T VVVPAGEEIMVP+C EC       XXXXXXXXXXXXXX +R+H TGN++THLRV I+
Sbjct:  307 CSEMEAEGRGARRRALDRLEAAAMVVQACVARGCSGRALAREASGRRELHRHDARLNWAASLLQTRMRAFAARTRAAKLAMKRYYRCLDGLTGAEYYFDPKTGKSSWTKPKILGKFDISTAVVVPAGEEIMVPMCHECAXXXXXXXXXXXXXXXXXXXXVDRIHRTGNASTHLRVPIE 484          
BLAST of mRNA_L-digitata_M_contig9792.1.1 vs. uniprot
Match: A0A6H5KU11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU11_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 1.700e-49
Identity = 95/175 (54.29%), Postives = 117/175 (66.86%), Query Frame = 0
Query:    3 CKTLNSEGRGAQQRALMRVEGAAIHVQACVARGGAGRRLARAARERRDVERERAKVNWAASVIQTRRVTDESATR------------------------------ASKMALTRYYRCLDGLTGAEYYFDPKTGGSSWTKPKVLGKLDIPTVVVVPAGEEIMVPICRECEQEPATE 147
            C  + +EGRGA++RAL R+E AA+ VQAC+ARG +GR LAR A  RR+++R   ++NWAAS++QTR +   S TR                              A+KMA+ RYYRCLDGLTGAEYYFDPKTG SSW KPK+LGK DI T VVVPAGEEIMVP+C EC +E AT+
Sbjct:  249 CSEMEAEGRGARRRALDRLEAAAVVVQACMARGCSGRALAREASGRRELDRHNTRLNWAASLLQTRWMKTHSKTRPGVARFTLRTLFVKIYCMQEQMRAFAARTRAAKMAVKRYYRCLDGLTGAEYYFDPKTGKSSWAKPKILGKFDISTAVVVPAGEEIMVPMCHECAEEVATD 423          
BLAST of mRNA_L-digitata_M_contig9792.1.1 vs. uniprot
Match: A0A482UT58_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UT58_9ARCH)

HSP 1 Score: 61.6 bits (148), Expect = 9.920e-8
Identity = 34/101 (33.66%), Postives = 50/101 (49.50%), Query Frame = 0
Query:   80 KMALTRYYRCLDGLTGAEYYFDPKTGGSSWTKPKVLGKLDIPTVVVVPAGEEIMVPICRECEQEPATEXXXXXXXXXXXXXXANRLHATGNSTTHLRVTID 180
            K++   Y + LDG +  EY+F+P+T  S WTKP++LG LD    V +P  +E     C  CE+  AT               A+ +H TG   TH  + +D
Sbjct:  697 KISQHLYSKYLDGESEREYWFNPRTQTSYWTKPRLLGDLDCGPAVRMPTPDEAFTIFCTNCEKNHATCYCQQCNGPYCTPCYAS-IHRTGTRKTHQHLLVD 796          
BLAST of mRNA_L-digitata_M_contig9792.1.1 vs. uniprot
Match: A0A7S3PQJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PQJ7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 5.070e-7
Identity = 29/92 (31.52%), Postives = 43/92 (46.74%), Query Frame = 0
Query:   98 YYFDPKTGGSSWTKPKVLGKLDIPTVVVVPAGEEIMVPICRECEQEPATEXXXXXXXXXXXXXXANRLHATGNSTTHLRVTIDKCEECSFQV 189
            Y+F+PKTG +SW KP VL   ++ TVV +P     +V  C  C ++   +               +  H  G   TH+ V+I  C  C FQ+
Sbjct:    6 YWFNPKTGRTSWEKPHVLQDAEVDTVVHIPPERHQLVKYCERCSEK-LIKVFCDDCEEYTCRDCFDSFHTKGKRATHISVSIKTCIHCQFQL 96          
BLAST of mRNA_L-digitata_M_contig9792.1.1 vs. uniprot
Match: A0A7S3GX72_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GX72_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.130e-6
Identity = 31/103 (30.10%), Postives = 46/103 (44.66%), Query Frame = 0
Query:   80 KMALTRYYRCLDGLTGAEYYFDPKTGGSSWTKPKVLGKLDIPTVVVVPAGEEIMVPICRECEQEPATEXXXXXXXXXXXXXXANRLHATGNSTTHLRVTIDKC 182
            +MA   Y + +DG T  EY+ +P+T  S WTKP +LG+ D      +P+ EE    +C +C    AT               A   H  G+   H  + +D C
Sbjct:  136 RMAQAMYTKFIDGATEREYWCNPRTNVSHWTKPALLGEFDCGMATRMPSEEERFTVVCGQCATTTATCFCIQCDEPYCTMCYALG-HRAGHRKNHAHLLVDNC 237          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9792.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LT38_ECTSI1.880e-5666.29B box-type domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5KU11_9PHAE1.700e-4954.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482UT58_9ARCH9.920e-833.66Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A7S3PQJ7_9STRA5.070e-731.52Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
A0A7S3GX72_9STRA2.130e-630.10Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd19757Bbox1coord: 136..179
e-value: 3.19085E-5
score: 37.8607

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9792contigL-digitata_M_contig9792:905..9086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9792.1.1mRNA_L-digitata_M_contig9792.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9792 905..9086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9792.1.1 ID=prot_L-digitata_M_contig9792.1.1|Name=mRNA_L-digitata_M_contig9792.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=191bp
KVCKTLNSEGRGAQQRALMRVEGAAIHVQACVARGGAGRRLARAARERRD
VERERAKVNWAASVIQTRRVTDESATRASKMALTRYYRCLDGLTGAEYYF
DPKTGGSSWTKPKVLGKLDIPTVVVVPAGEEIMVPICRECEQEPATEICA
DCDEDVLCDACANRLHATGNSTTHLRVTIDKCEECSFQVTI
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