prot_L-digitata_M_contig97696.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig97696.1.1
Unique Nameprot_L-digitata_M_contig97696.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length305
Homology
BLAST of mRNA_L-digitata_M_contig97696.1.1 vs. uniprot
Match: A0A222E4V1_9RHOB (HTH-type transcriptional regulator CynR n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E4V1_9RHOB)

HSP 1 Score: 581 bits (1497), Expect = 4.250e-209
Identity = 300/304 (98.68%), Postives = 303/304 (99.67%), Query Frame = 0
Query:    1 MEFTALRYFHETARAGSIRRAAEALHVTASSVSRGIAGLEHQFGAPLFERSRKGMTLTAAGTLLARQTHRTFRDLDRVQDAIDDLRGLRRGQVTLYAAEGLVAEFLPAVVNDFMAQYPQIGFEIRLDSTDGIVGALLDDVADIGITFNGPHRNDIGVVTEHVEPICCLVRPGHPLEQFAVQGSLKLDTVLKWPLALPEQSFGMRRMVDSAIARASGKQRIAINTNSIELTKRVAMNGDAVAFMPAFMVRKDIAANRLRALSLDCPDLDAARVTVCVHRDRELSFAAKALLTALTAHFSAIEAPV 304
            MEFTALRYFHETARAGSIRRAAEALHVTASSVSRGIAGLEHQFGAPLFERSRKGMTLTAAGTLLARQTHRTFRDLDRV+DAIDDLRGLRRGQVTLYAAEGLVAEFLPAVVNDFMAQYPQIGFEIRLDSTDGIVGALLDDVADIGITFNGPHRNDIGVVTEHVEPICCLVRPGHPLEQFAVQGSLKLDTVLKWPLALPEQSFGMRRMVDSAIARASGKQ+IA+NTNSIELTKRVAMNGDAVAFMPAFMVRKDIAANRLRALSLDCPDLDAARVTVCVHRDRELSFAAKALLTALTAHFSAI APV
Sbjct:    1 MEFTALRYFHETARAGSIRRAAEALHVTASSVSRGIAGLEHQFGAPLFERSRKGMTLTAAGTLLARQTHRTFRDLDRVRDAIDDLRGLRRGQVTLYAAEGLVAEFLPAVVNDFMAQYPQIGFEIRLDSTDGIVGALLDDVADIGITFNGPHRNDIGVVTEHVEPICCLVRPGHPLEQFAVQGSLKLDTVLKWPLALPEQSFGMRRMVDSAIARASGKQQIAMNTNSIELTKRVAMNGDAVAFMPAFMVRKDIAANRLRALSLDCPDLDAARVTVCVHRDRELSFAAKALLTALTAHFSAIGAPV 304          
BLAST of mRNA_L-digitata_M_contig97696.1.1 vs. uniprot
Match: A0A239LNX7_9RHOB (DNA-binding transcriptional regulator, LysR family n=1 Tax=Tropicimonas sediminicola TaxID=1031541 RepID=A0A239LNX7_9RHOB)

HSP 1 Score: 469 bits (1207), Expect = 5.780e-165
Identity = 240/303 (79.21%), Postives = 265/303 (87.46%), Query Frame = 0
Query:    1 MEFTALRYFHETARAGSIRRAAEALHVTASSVSRGIAGLEHQFGAPLFERSRKGMTLTAAGTLLARQTHRTFRDLDRVQDAIDDLRGLRRGQVTLYAAEGLVAEFLPAVVNDFMAQYPQIGFEIRLDSTDGIVGALLDDVADIGITFNGPHRNDIGVVTEHVEPICCLVRPGHPLEQFAVQGSLKLDTVLKWPLALPEQSFGMRRMVDSAIARASGKQRIAINTNSIELTKRVAMNGDAVAFMPAFMVRKDIAANRLRALSLDCPDLDAARVTVCVHRDRELSFAAKALLTALTAHFSAIEAP 303
            MEFTALRYFHETARAGSIRRAAE LHVTASSVSR I+ LEH+ GAPLFERSRKG+TLT AGTLL+R T +TFRDL+RV+DAIDDLRGL RGQVTLYAAEGLVAEFLPAV++ F A++PQIGFEIRLDSTDGIV ALLDD+ADIGITFNGPHRNDI  V EHVEP+CC+VRPGHPL+       L+L  VL+WPLALPEQSFGMRRMVD+AIAR  G+ R+AINTNS+ELTKRVAMNGDAVAFMPAFMV KDIAA RLRAL ++C DL A+R+TVCVHRDRELSFAAKAL   L AHF AI  P
Sbjct:    1 MEFTALRYFHETARAGSIRRAAEVLHVTASSVSRAISALEHELGAPLFERSRKGVTLTDAGTLLSRHTQKTFRDLERVKDAIDDLRGLHRGQVTLYAAEGLVAEFLPAVISAFTAKHPQIGFEIRLDSTDGIVSALLDDIADIGITFNGPHRNDIATVAEHVEPLCCIVRPGHPLD--LAPAPLRLSDVLEWPLALPEQSFGMRRMVDAAIARLPGRPRLAINTNSLELTKRVAMNGDAVAFMPAFMVGKDIAAGRLRALRIECADLAASRITVCVHRDRELSFAAKALSAELVAHFEAIPRP 301          
BLAST of mRNA_L-digitata_M_contig97696.1.1 vs. uniprot
Match: UPI001C08C1EB (LysR family transcriptional regulator n=1 Tax=Citreicella sp. C3M06 TaxID=2841564 RepID=UPI001C08C1EB)

HSP 1 Score: 446 bits (1148), Expect = 8.500e-156
Identity = 231/302 (76.49%), Postives = 254/302 (84.11%), Query Frame = 0
Query:    1 MEFTALRYFHETARAGSIRRAAEALHVTASSVSRGIAGLEHQFGAPLFERSRKGMTLTAAGTLLARQTHRTFRDLDRVQDAIDDLRGLRRGQVTLYAAEGLVAEFLPAVVNDFMAQYPQIGFEIRLDSTDGIVGALLDDVADIGITFNGPHRNDIGVVTEHVEPICCLVRPGHPLEQFAVQGSLKLDTVLKWPLALPEQSFGMRRMVDSAIARASGKQRIAINTNSIELTKRVAMNGDAVAFMPAFMVRKDIAANRLRALSLDCPDLDAARVTVCVHRDRELSFAAKALLTALTAHFSAIEA 302
            M+FTALRYFHETAR+GSIRRAAE LHVT SSVSR IA LEH  GAPLFERSR+GMT+TAAGTLL R T RTFR+ DRV+DAIDDLRGL RGQVTLYAAEGLVAEFLPAV++DF A++PQIGF+IR +STD IVGAL+DD ADIGITFNGP RNDI  + EH EPICCLV P HPL +    G   L  VL WPLALPE SFGMRRMVD+AIAR++G  R+AINTNS+ELTKRVAM GDAVAFMP FMVRKD+AA RL AL LDCPDL+AARVTVCVHRDRELSFAAKAL   L AHF  + A
Sbjct:   14 MDFTALRYFHETARSGSIRRAAETLHVTPSSVSRAIAALEHDLGAPLFERSRRGMTMTAAGTLLMRHTQRTFREFDRVRDAIDDLRGLHRGQVTLYAAEGLVAEFLPAVISDFAARHPQIGFDIRFESTDAIVGALIDDQADIGITFNGPMRNDIAALAEHTEPICCLVCPDHPLARHPRPG---LCDVLAWPLALPETSFGMRRMVDTAIARSAGTARLAINTNSLELTKRVAMTGDAVAFMPGFMVRKDVAAGRLVALHLDCPDLEAARVTVCVHRDRELSFAAKALSALLVAHFRGLRA 312          
BLAST of mRNA_L-digitata_M_contig97696.1.1 vs. uniprot
Match: A0A2T6AQL5_9RHOB (DNA-binding transcriptional LysR family regulator n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A2T6AQL5_9RHOB)

HSP 1 Score: 408 bits (1048), Expect = 9.730e-141
Identity = 209/300 (69.67%), Postives = 244/300 (81.33%), Query Frame = 0
Query:    1 MEFTALRYFHETARAGSIRRAAEALHVTASSVSRGIAGLEHQFGAPLFERSRKGMTLTAAGTLLARQTHRTFRDLDRVQDAIDDLRGLRRGQVTLYAAEGLVAEFLPAVVNDFMAQYPQIGFEIRLDSTDGIVGALLDDVADIGITFNGPHRNDIGVVTEHVEPICCLVRPGHPLEQFAVQGSLKLDTVLKWPLALPEQSFGMRRMVDSAIARASGKQRIAINTNSIELTKRVAMNGDAVAFMPAFMVRKDIAANRLRALSLDCPDLDAARVTVCVHRDRELSFAAKALLTALTAHFSAI 300
            MEFTAL+YFHETAR GSIRRA+E LHVT SSVSR ++ LEH+FGAPLFERSRKG+ LT+AGTLLARQT R FRDLDRV+D+IDDLRGL RG+VTLY AEGLVAEF+P V+N F  ++PQIGF++  DSTD IV AL+DDVADIGITFNGP R+DI  V EH EP+ CLVRPGH LE+ A  G + +  +L +PLALPE SFGMRRMVD+A+AR S +  I +NTNS+EL KRVAMNGDAVAFMP FMV  D+AA RLRAL ++      ARVTVC+HRDRELSFAAKAL+  L  HF A+
Sbjct:    1 MEFTALKYFHETARTGSIRRASEVLHVTPSSVSRAVSALEHEFGAPLFERSRKGVRLTSAGTLLARQTQRMFRDLDRVRDSIDDLRGLHRGRVTLYGAEGLVAEFMPRVINAFHEKHPQIGFDLHFDSTDAIVAALVDDVADIGITFNGPQRSDIVTVAEHSEPLHCLVRPGHALEEVARDGLITVGDLLGYPLALPETSFGMRRMVDTALARESLRPAINVNTNSLELAKRVAMNGDAVAFMPGFMVTDDVAAGRLRALQVEGEAFRDARVTVCLHRDRELSFAAKALVAVLKEHFEAL 300          
BLAST of mRNA_L-digitata_M_contig97696.1.1 vs. uniprot
Match: A0A5D0VD14_9RHOB (LysR family transcriptional regulator n=1 Tax=Rhodobacterales bacterium TaxID=1948890 RepID=A0A5D0VD14_9RHOB)

HSP 1 Score: 402 bits (1033), Expect = 1.790e-138
Identity = 206/297 (69.36%), Postives = 240/297 (80.81%), Query Frame = 0
Query:    1 MEFTALRYFHETARAGSIRRAAEALHVTASSVSRGIAGLEHQFGAPLFERSRKGMTLTAAGTLLARQTHRTFRDLDRVQDAIDDLRGLRRGQVTLYAAEGLVAEFLPAVVNDFMAQYPQIGFEIRLDSTDGIVGALLDDVADIGITFNGPHRNDIGVVTEHVEPICCLVRPGHPLEQFAVQGSLKLDTVLKWPLALPEQSFGMRRMVDSAIARASGKQRIAINTNSIELTKRVAMNGDAVAFMPAFMVRKDIAANRLRALSLDCPDLDAARVTVCVHRDRELSFAAKALLTALTAHF 297
            MEFTALRYFHE AR GSIRRA+E LHVT SSVSR ++ LEH+FGAPLFER  KG+TLTAAGTLLARQT   FR+LDRV+D+IDDLRGL RG+V LY AEGLVAEFLP V++DF A++PQIGF+I  DSTD IV A+LDDVADIGITFNGP R DI  + E+ EP+CC+V+P HPLE  A  G++KL  ++  PLALPE SFGMRRMVD A + AS + RI INTNS+ELTKRVAM GDAVAFMP FMVR +IAA RL AL +  P    A+V++CVHRDRELSFAAKAL+  L+ HF
Sbjct:    1 MEFTALRYFHEAARTGSIRRASEILHVTPSSVSRAVSALEHEFGAPLFERGAKGVTLTAAGTLLARQTGSMFRNLDRVRDSIDDLRGLNRGKVILYGAEGLVAEFLPRVIHDFRARHPQIGFDIHFDSTDAIVAAVLDDVADIGITFNGPQRLDIATLAEYTEPLCCIVQPNHPLEARASDGAVKLADLVDMPLALPETSFGMRRMVDKAFSGASSRPRIVINTNSLELTKRVAMEGDAVAFMPTFMVRDEIAAGRLSALRVLDPAFQEAKVSLCVHRDRELSFAAKALVETLSRHF 297          
BLAST of mRNA_L-digitata_M_contig97696.1.1 vs. uniprot
Match: A0A8J2ZI26_9RHOB (LysR family transcriptional regulator n=1 Tax=Salipiger pallidus TaxID=1775170 RepID=A0A8J2ZI26_9RHOB)

HSP 1 Score: 372 bits (956), Expect = 1.280e-127
Identity = 192/248 (77.42%), Postives = 212/248 (85.48%), Query Frame = 0
Query:   55 MTLTAAGTLLARQTHRTFRDLDRVQDAIDDLRGLRRGQVTLYAAEGLVAEFLPAVVNDFMAQYPQIGFEIRLDSTDGIVGALLDDVADIGITFNGPHRNDIGVVTEHVEPICCLVRPGHPLEQFAVQGSLKLDTVLKWPLALPEQSFGMRRMVDSAIARASGKQRIAINTNSIELTKRVAMNGDAVAFMPAFMVRKDIAANRLRALSLDCPDLDAARVTVCVHRDRELSFAAKALLTALTAHFSAIEA 302
            MTLTAAG LL+R T RTFR+ DRV+DAIDDLRGL RG VTLYAAEGLVAEFLPAV++DF A++PQIGFEIR DSTDGIVGAL+DDVADIGITFNGP RNDI  VTEH+EPICCLVRPGHPL + +     +L  VL WPLALPE SFGMRRMVD AIAR+SG  RIAINTNS+ELTKRVAM GDAVAFMP FMV KDIAA RL AL L+CPDL+ ARV+VCVHRDRELSFAAKAL + LT+HF A+ A
Sbjct:    1 MTLTAAGILLSRHTQRTFREFDRVRDAIDDLRGLHRGNVTLYAAEGLVAEFLPAVISDFAARHPQIGFEIRFDSTDGIVGALIDDVADIGITFNGPARNDIATVTEHIEPICCLVRPGHPLAELSRP---QLADVLGWPLALPETSFGMRRMVDVAIARSSGVPRIAINTNSLELTKRVAMTGDAVAFMPGFMVHKDIAAGRLLALRLNCPDLEEARVSVCVHRDRELSFAAKALSSLLTSHFRALGA 245          
BLAST of mRNA_L-digitata_M_contig97696.1.1 vs. uniprot
Match: A0A1Q3K8Q1_9PROT (LysR family transcriptional regulator n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Q3K8Q1_9PROT)

HSP 1 Score: 346 bits (888), Expect = 1.870e-116
Identity = 177/300 (59.00%), Postives = 225/300 (75.00%), Query Frame = 0
Query:    1 MEFTALRYFHETARAGSIRRAAEALHVTASSVSRGIAGLEHQFGAPLFERSRKGMTLTAAGTLLARQTHRTFRDLDRVQDAIDDLRGLRRGQVTLYAAEGLVAEFLPAVVNDFMAQYPQIGFEIRLDSTDGIVGALLDDVADIGITFNGPHRNDIGVVTEHVEPICCLVRPGHPLEQFAVQGSLKLDTVLKWPLALPEQSFGMRRMVDSAIARASGKQRIAINTNSIELTKRVAMNGDAVAFMPAFMVRKDIAANRLRALSLDCPDLDAARVTVCVHRDRELSFAAKALLTALTAHFSAI 300
            MEF +LRYFHETAR GSIRRAAE LHVT SS+SR IA LE   G  LFERSR+GM LTAAGT+L+RQT RTFRD +R++ AIDDL+GLRRGQV++YA EGL+AEFLP V++ + A++P + F +   STD IV A++DD  DIGITFNGP R+++  V E+VEP+ CLV P HPL   A + S+ L  VL +PLALPE SFG+RRM+D+ I R     +I + TNS+EL KR+AM G AVAFMP FMV  D++A RLR++ +  P   ++RV VCVHRDR +S+AA+ L+ +L  HFS I
Sbjct:    1 MEFVSLRYFHETARTGSIRRAAENLHVTPSSISRMIASLEQDLGTALFERSRQGMRLTAAGTILSRQTQRTFRDFERIRGAIDDLKGLRRGQVSIYAPEGLIAEFLPTVISQYQAKFPAVSFNVVFASTDRIVEAIIDDETDIGITFNGPERDELAKVVEYVEPLTCLVAPSHPL---ARKRSVLLKDVLAYPLALPETSFGLRRMIDTGIRREKLSPQITVCTNSLELAKRMAMLGSAVAFMPRFMVMDDVSAGRLRSIRVQSPAFSSSRVAVCVHRDRNISYAARELIESLKRHFSQI 297          
BLAST of mRNA_L-digitata_M_contig97696.1.1 vs. uniprot
Match: A0A0Q5ZCX7_9BURK (LysR family transcriptional regulator n=1 Tax=Ramlibacter sp. Leaf400 TaxID=1736365 RepID=A0A0Q5ZCX7_9BURK)

HSP 1 Score: 283 bits (724), Expect = 1.610e-91
Identity = 147/294 (50.00%), Postives = 202/294 (68.71%), Query Frame = 0
Query:    1 MEFTALRYFHETARAGSIRRAAEALHVTASSVSRGIAGLEHQFGAPLFERSRKGMTLTAAGTLLARQTHRTFRDLDRVQDAIDDLRGLRRGQVTLYAAEGLVAEFLPAVVNDFMAQYPQIGFEIRLDSTDGIVGALLDDVADIGITFNGPHRNDIGVVTEHVEPICCLVRPGHPLEQFAVQGSLKLDTVLKWPLALPEQSFGMRRMVDSAIARASGKQRIAINTNSIELTKRVAMNGDAVAFMPAFMVRKDIAANRLRALSLDCPDLDAARVTVCVHRDRELSFAAKALLTALT 294
            M F  +RYFHE A+ GS+RRAA+ LHV  S+VSR IA LE +F A LFERS+ G+ LTAAG +L R+T R F+DL+R + A+DDLRGLRRG++T++  EGLV++FLP ++ +F  +YP + F ++   TD IV ALL+D  DIG+TFN   R +I VV E +EPI CLV   HP   +A + SL++  + K PLALPE SFG+R++ D A+ +   + ++ + TNS+ELTK +A+ G  +AFMPA  V  ++    L  + +D PD  AAR  VCVHRDR L  AA+A L+ LT
Sbjct:    1 MRFLTIRYFHEVAKLGSVRRAADRLHVAPSAVSRQIAQLEDEFDAVLFERSKLGVQLTAAGEVLHRETRRIFQDLERARVALDDLRGLRRGEITIWVLEGLVSDFLPRIIAEFNRRYPDVSFNVQTAPTDRIVEALLEDWTDIGVTFNAAPRAEIEVVGEFIEPISCLVAKSHP---YARRKSLRMVDICKQPLALPEHSFGLRQVFDRAVRKYGYEPKVVVTTNSLELTKTMAVTGQVIAFMPALNVTHEVEMGALLLVPVDEPDFAAARSAVCVHRDRPLPHAARAFLSLLT 291          
BLAST of mRNA_L-digitata_M_contig97696.1.1 vs. uniprot
Match: E6VNS1_RHOPX (Transcriptional regulator, LysR family n=8 Tax=Rhodopseudomonas TaxID=1073 RepID=E6VNS1_RHOPX)

HSP 1 Score: 280 bits (716), Expect = 2.450e-90
Identity = 152/293 (51.88%), Postives = 203/293 (69.28%), Query Frame = 0
Query:    1 MEFTALRYFHETARAGSIRRAAEALHVTASSVSRGIAGLEHQFGAPLFERSRKGMTLTAAGTLLARQTHRTFRDLDRVQDAIDDLRGLRRGQVTLYAAEGLVAEFLPAVVNDFMAQYPQIGFEIRLDSTDGIVGALLDDVADIGITFNGPHRNDIGVVTEHVEPICCLVRPGHPLEQFAVQGSLKLDTVLKWPLALPEQSFGMRRMVDSAIARASGKQRIAINTNSIELTKRVAMNGDAVAFMPAFMVRKDIAANRLRALSLDCPDLDAARVTVCVHRDRELSFAAKALLTAL 293
            M F  LRYF+E AR GSIR+AA+ LHV  S+VSR IA LEH+  A LFERS+ G+ LT AG +LARQ++R FRDLDR ++ IDDLRGLRRG+V+L+  EGLV+  LP ++ +F  +YP + F I+  STD I+ ALL+D ADIGITFN   R +I V+ EHVEPI CLV P H   +FA + SL LD +    +ALPE SFG+R++ + AIA+     ++ + TNS+ELTKR+A  G  +AFMPA  V  ++ ++ LRA+ +  P   AAR ++ +HRDR L  A +A L AL
Sbjct:    1 MRFLTLRYFNEVARLGSIRKAADRLHVAPSAVSRQIAQLEHELDAVLFERSKVGVQLTPAGEVLARQSNRIFRDLDRARNEIDDLRGLRRGEVSLFVIEGLVSGLLPDLLANFHHRYPAVTFRIQTGSTDRIIEALLEDEADIGITFNATPRPEIEVIAEHVEPIACLVAPTH---EFANRVSLTLDDICTQTIALPEHSFGLRQVFERAIAKRQRTPQVLVTTNSLELTKRMAATGQVIAFMPALTVITELHSDALRAIPIADPAFAAARSSISIHRDRPLPHAPQAFLKAL 290          
BLAST of mRNA_L-digitata_M_contig97696.1.1 vs. uniprot
Match: UPI0018E9B339 (LysR family transcriptional regulator n=1 Tax=Acuticoccus mangrovi TaxID=2796142 RepID=UPI0018E9B339)

HSP 1 Score: 278 bits (711), Expect = 2.120e-89
Identity = 148/296 (50.00%), Postives = 199/296 (67.23%), Query Frame = 0
Query:    3 FTALRYFHETARAGSIRRAAEALHVTASSVSRGIAGLEHQFGAPLFERSRKGMTLTAAGTLLARQTHRTFRDLDRVQDAIDDLRGLRRGQVTLYAAEGLVAEFLPAVVNDFMAQYPQIGFEIRLDSTDGIVGALLDDVADIGITFNGPHRNDIGVVTEHVEPICCLVRPGHPLEQFAVQGSLKLDTVLKWPLALPEQSFGMRRMVDSAIARASGKQRIAINTNSIELTKRVAMNGDAVAFMPAFMVRKDIAANRLRALSLDCPDLDAARVTVCVHRDRELSFAAKALLTALTAHFS 298
            FTALRYFHET RAGSIRRAAEALHV+ SSVSR I  LE +F  PL ER+ +G+ LT+AG LLAR T RTFRDL RV+  IDDL+GLRRG V  Y  EG+VAEF+P+++  F ++YP I F +   +TD ++ AL+ D ADI + +N P R+DI  V E+VEP+ CLV PGHPL   A    L +  ++  PLALP+ +FG+RRM+D+   R +    +AI+TNS+ELTK+ A++G A++F PA     +  A  +  + +   ++   R  +CVHRDREL FAA   L  +   F+
Sbjct:    2 FTALRYFHETVRAGSIRRAAEALHVSPSSVSRQIMSLEREFDVPLLERTGQGVRLTSAGELLARHTDRTFRDLGRVRGWIDDLKGLRRGHVVAYVIEGMVAEFVPSILTTFRSRYPAITFSLATAATDRLLEALIRDEADIAVVYNAPERSDIVTVLEYVEPLRCLVPPGHPLAGHA---ELTVRDLVGEPLALPDPTFGLRRMIDAGFRRHNCVPTVAIDTNSLELTKQAALSGMAISFRPAVTTLTEAEAAAITVVPVRADEIAPGRTALCVHRDRELPFAAAEFLRLMVLKFT 294          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig97696.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A222E4V1_9RHOB4.250e-20998.68HTH-type transcriptional regulator CynR n=2 Tax=Ro... [more]
A0A239LNX7_9RHOB5.780e-16579.21DNA-binding transcriptional regulator, LysR family... [more]
UPI001C08C1EB8.500e-15676.49LysR family transcriptional regulator n=1 Tax=Citr... [more]
A0A2T6AQL5_9RHOB9.730e-14169.67DNA-binding transcriptional LysR family regulator ... [more]
A0A5D0VD14_9RHOB1.790e-13869.36LysR family transcriptional regulator n=1 Tax=Rhod... [more]
A0A8J2ZI26_9RHOB1.280e-12777.42LysR family transcriptional regulator n=1 Tax=Sali... [more]
A0A1Q3K8Q1_9PROT1.870e-11659.00LysR family transcriptional regulator n=2 Tax=Alph... [more]
A0A0Q5ZCX7_9BURK1.610e-9150.00LysR family transcriptional regulator n=1 Tax=Raml... [more]
E6VNS1_RHOPX2.450e-9051.88Transcriptional regulator, LysR family n=8 Tax=Rho... [more]
UPI0018E9B3392.120e-8950.00LysR family transcriptional regulator n=1 Tax=Acut... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000847Transcription regulator HTH, LysRPRINTSPR00039HTHLYSRcoord: 39..50
score: 47.12
coord: 18..29
score: 34.6
coord: 29..39
score: 31.53
IPR000847Transcription regulator HTH, LysRPFAMPF00126HTH_1coord: 4..61
e-value: 1.7E-20
score: 72.7
IPR000847Transcription regulator HTH, LysRPROSITEPS50931HTH_LYSRcoord: 1..58
score: 31.015081
IPR005119LysR, substrate-bindingPFAMPF03466LysR_substratecoord: 87..297
e-value: 8.6E-40
score: 136.4
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..91
e-value: 2.6E-24
score: 86.9
NoneNo IPR availableGENE3D3.40.190.290coord: 93..301
e-value: 4.6E-33
score: 116.4
NoneNo IPR availablePANTHERPTHR30419HTH-TYPE TRANSCRIPTIONAL REGULATOR YBHDcoord: 1..299
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 90..299
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 1..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig97696contigL-digitata_M_contig97696:20..934 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig97696.1.1mRNA_L-digitata_M_contig97696.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig97696 20..934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig97696.1.1 ID=prot_L-digitata_M_contig97696.1.1|Name=mRNA_L-digitata_M_contig97696.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=305bp
MEFTALRYFHETARAGSIRRAAEALHVTASSVSRGIAGLEHQFGAPLFER
SRKGMTLTAAGTLLARQTHRTFRDLDRVQDAIDDLRGLRRGQVTLYAAEG
LVAEFLPAVVNDFMAQYPQIGFEIRLDSTDGIVGALLDDVADIGITFNGP
HRNDIGVVTEHVEPICCLVRPGHPLEQFAVQGSLKLDTVLKWPLALPEQS
FGMRRMVDSAIARASGKQRIAINTNSIELTKRVAMNGDAVAFMPAFMVRK
DIAANRLRALSLDCPDLDAARVTVCVHRDRELSFAAKALLTALTAHFSAI
EAPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000847Tscrpt_reg_HTH_LysR
IPR005119LysR_subst-bd
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf