prot_L-digitata_M_contig97652.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig97652.1.1
Unique Nameprot_L-digitata_M_contig97652.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length153
Homology
BLAST of mRNA_L-digitata_M_contig97652.1.1 vs. uniprot
Match: A0A1F9B1F0_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium RBG_13_49_15 TaxID=1797827 RepID=A0A1F9B1F0_9DELT)

HSP 1 Score: 76.6 bits (187), Expect = 2.020e-13
Identity = 42/127 (33.07%), Postives = 67/127 (52.76%), Query Frame = 0
Query:   26 LIRAVRGRRLYPTGHLILRGYVEQAHQGLQKILASVSPLSFRVREDRLFFEDDAVLVDADRLEGLPFLLFSHSIQQIEFKRGIDLEELQQLIDLVAQDYRGDDHVGEDLVTALWRIHLAHFDYLVVD 152
            LI A++   LYP GH   +  VEQ    L   L     L F V ++R+FFE + +  +A     LP +L+   ++ IEF+ GI+ EE+ + ++++ + +        DLVTALW    +H  Y+V D
Sbjct:   23 LIPALKNYNLYPEGHENRKRVVEQLQNPLSTYLRLYGDLRFDVGKNRIFFEGEEIHSEAVSEGNLPGILYRDGLKWIEFREGIESEEVMKFLNILNRYWILSAEPEGDLVTALWEAQFSHIQYMVTD 149          
BLAST of mRNA_L-digitata_M_contig97652.1.1 vs. uniprot
Match: A0A7V5LKD7_9BACT (HEAT repeat domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V5LKD7_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 4.530e-10
Identity = 34/141 (24.11%), Postives = 69/141 (48.94%), Query Frame = 0
Query:   12 RHPLGSEIATWLQTLIRAVRGRRLYPTGHLILRGYVEQAHQGLQKILASVSPLSFRVREDRLFFEDDAVLVDADRLEGLPFLLFSHSIQQIEFKRGIDLEELQQLIDLVAQDYRGDDHVGEDLVTALWRIHLAHFDYLVVD 152
            + P   E A +   + +AV+ R +YP+   +   + E+     ++I   +  L ++V  + + + D  V     R E    + F   +  ++F +GI+L EL +L+DL+A+  R   ++ +DL T  W  +  +  Y ++D
Sbjct:   17 QQPFTKEAAEFFTFIAKAVKARLVYPSSSKLPSQFKEELASKAEEIFQDIDSLDYKVTSNSILYGDTTVYESNSRSENFAHIFFRDGLIGLKFSKGINLNELTRLVDLLAKMLRT-VYIDDDLATLFWEENFQYISYDLID 156          
BLAST of mRNA_L-digitata_M_contig97652.1.1 vs. uniprot
Match: A0A661A260_9BACT (Uncharacterized protein n=4 Tax=Bacteria TaxID=2 RepID=A0A661A260_9BACT)

HSP 1 Score: 62.0 bits (149), Expect = 2.460e-8
Identity = 30/137 (21.90%), Postives = 78/137 (56.93%), Query Frame = 0
Query:   18 EIATWLQTLIRAVRGRRLYPTGHLILRGYVEQAHQGLQKILASVSPLSFRVREDRLFFEDDAVLVDADRLEGLPFLLFSHSIQQIEFKRGIDLEELQQLIDLVAQ-DYRGDDHVGEDLVTALWRIHLAHFDYLVVDI 153
            ++  ++ +L++ ++G +LY +   + + ++++ +  L ++L    P +F +  +R+ +    V  D +++  LP   + + I+ I F  G++LEEL++ +D+VA+ ++  D ++ EDL    W  +  +  + +V++
Sbjct:    6 QVKKFINSLLKTIKGLKLYRSKSRLPQRFLKETYDILLELLKD-GPQTFDIDTERILYSGKEVHRDDNKITSLPLFFYRNGIRSITFLEGLELEELERFVDIVAKSEFVSDLNLSEDL----WESNFVNIIFTIVEL 137          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig97652.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A1F9B1F0_9DELT2.020e-1333.07Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A7V5LKD7_9BACT4.530e-1024.11HEAT repeat domain-containing protein (Fragment) n... [more]
A0A661A260_9BACT2.460e-821.90Uncharacterized protein n=4 Tax=Bacteria TaxID=2 R... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig97652contigL-digitata_M_contig97652:101..559 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig97652.1.1mRNA_L-digitata_M_contig97652.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig97652 101..559 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig97652.1.1 ID=prot_L-digitata_M_contig97652.1.1|Name=mRNA_L-digitata_M_contig97652.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=153bp
AEPAVPAQVAPRHPLGSEIATWLQTLIRAVRGRRLYPTGHLILRGYVEQA
HQGLQKILASVSPLSFRVREDRLFFEDDAVLVDADRLEGLPFLLFSHSIQ
QIEFKRGIDLEELQQLIDLVAQDYRGDDHVGEDLVTALWRIHLAHFDYLV
VDI
back to top