prot_L-digitata_M_contig97638.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig97638.1.1
Unique Nameprot_L-digitata_M_contig97638.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length168
Homology
BLAST of mRNA_L-digitata_M_contig97638.1.1 vs. uniprot
Match: A0A2E7PK16_9PROT (UvrABC system protein A n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7PK16_9PROT)

HSP 1 Score: 293 bits (749), Expect = 9.020e-91
Identity = 146/160 (91.25%), Postives = 154/160 (96.25%), Query Frame = 0
Query:    1 EIVYRDKSIADVLAMTVEEGREFFKAVPSIRDKLETLERVGLSYIQVGQAATTLSGGEAQRVKLAKELSRRATGKTIYILDEPTTGLHYHDVRKLLEVLDALVEQGNTVVVIEHNLEVIKTADWILDLGPEGGDKGGEIVASGTPEDICAEQRSYTGAFL 160
            EI+YRDKSIADVL MTVEEGREFF AVPSIRDKLETLERVGLSYI VGQAATTLSGGEAQRVKLAKELSRRATGKT+YILDEPTTGLHYHDVRKLLEVL ALV+QGNTVVVIEHNLEVIKTADWI+DLGP+GGDKGGEIVA+GTPEDICA +RS+TG FL
Sbjct:  778 EILYRDKSIADVLDMTVEEGREFFMAVPSIRDKLETLERVGLSYIHVGQAATTLSGGEAQRVKLAKELSRRATGKTLYILDEPTTGLHYHDVRKLLEVLHALVDQGNTVVVIEHNLEVIKTADWIIDLGPDGGDKGGEIVATGTPEDICAAERSFTGDFL 937          
BLAST of mRNA_L-digitata_M_contig97638.1.1 vs. uniprot
Match: A0A2E2QA83_9PROT (Excinuclease ABC subunit A (Fragment) n=1 Tax=Micavibrio sp. TaxID=2024841 RepID=A0A2E2QA83_9PROT)

HSP 1 Score: 266 bits (680), Expect = 7.990e-88
Identity = 127/167 (76.05%), Postives = 152/167 (91.02%), Query Frame = 0
Query:    1 EIVYRDKSIADVLAMTVEEGREFFKAVPSIRDKLETLERVGLSYIQVGQAATTLSGGEAQRVKLAKELSRRATGKTIYILDEPTTGLHYHDVRKLLEVLDALVEQGNTVVVIEHNLEVIKTADWILDLGPEGGDKGGEIVASGTPEDICAEQRSYTGAFLTPXXXXH 167
            E+ ++DKSIADVL MT+E+  EFFKA+PSIRDK+ETL++VGLSYI+VGQ ATTLSGGEAQRVKL+KELS+R+TG+T+YILDEPTTGLH+ DVRKL+EVL  LV+QGNTVVVIEHNL+VIKTAD+ILD+GPEGGDKGGEIVA+GTPE+IC E+RSYTG +L P    H
Sbjct:   82 EVKFKDKSIADVLDMTIEDAAEFFKAIPSIRDKMETLKQVGLSYIKVGQQATTLSGGEAQRVKLSKELSKRSTGRTLYILDEPTTGLHFEDVRKLMEVLHHLVDQGNTVVVIEHNLDVIKTADYILDIGPEGGDKGGEIVATGTPEEICKEKRSYTGEYLKPILERH 248          
BLAST of mRNA_L-digitata_M_contig97638.1.1 vs. uniprot
Match: A0A827M289_ECOLX (ATP-binding cassette domain-containing protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A827M289_ECOLX)

HSP 1 Score: 263 bits (673), Expect = 1.290e-87
Identity = 128/160 (80.00%), Postives = 142/160 (88.75%), Query Frame = 0
Query:    1 EIVYRDKSIADVLAMTVEEGREFFKAVPSIRDKLETLERVGLSYIQVGQAATTLSGGEAQRVKLAKELSRRATGKTIYILDEPTTGLHYHDVRKLLEVLDALVEQGNTVVVIEHNLEVIKTADWILDLGPEGGDKGGEIVASGTPEDICAEQRSYTGAFL 160
            E+ ++ KSIADVL MTVEEG +FF AVP +RDKLETL RVGL YI +GQ ATTLSGGEAQR+KLAKELSR+ATGKT+YILDEPTTGLH+HDV KLLEVL  LV+QGNTVVVIEHNLEVIKTADW+LDLGPEGGD GGE+VA GTPED+ AE RSYTG FL
Sbjct:   20 EVQFKGKSIADVLDMTVEEGVDFFAAVPGVRDKLETLNRVGLGYIHIGQQATTLSGGEAQRIKLAKELSRKATGKTLYILDEPTTGLHFHDVAKLLEVLQELVDQGNTVVVIEHNLEVIKTADWVLDLGPEGGDGGGELVAQGTPEDVVAEPRSYTGQFL 179          
BLAST of mRNA_L-digitata_M_contig97638.1.1 vs. uniprot
Match: A0A2E7I0R6_9PROT (UvrABC system protein A n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I0R6_9PROT)

HSP 1 Score: 282 bits (721), Expect = 1.030e-86
Identity = 139/162 (85.80%), Postives = 150/162 (92.59%), Query Frame = 0
Query:    1 EIVYRDKSIADVLAMTVEEGREFFKAVPSIRDKLETLERVGLSYIQVGQAATTLSGGEAQRVKLAKELSRRATGKTIYILDEPTTGLHYHDVRKLLEVLDALVEQGNTVVVIEHNLEVIKTADWILDLGPEGGDKGGEIVASGTPEDICAEQRSYTGAFLTP 162
            EI+YR+KSIADVL MTVEEGR FF AVP+IRDKLETLERVGLSYI +GQAATTLSGGEAQRVKLAKEL+RRATGKT+YILDEPTTGLHYHDVRKLLEVL  LV QGNTVVVIEHNLEVIKTADW++DLGPEGGDKGGEIVA+GTPEDIC    S+TG FL+P
Sbjct:  778 EILYRNKSIADVLDMTVEEGRAFFSAVPAIRDKLETLERVGLSYIHIGQAATTLSGGEAQRVKLAKELARRATGKTLYILDEPTTGLHYHDVRKLLEVLHTLVNQGNTVVVIEHNLEVIKTADWVIDLGPEGGDKGGEIVATGTPEDICMVDGSFTGDFLSP 939          
BLAST of mRNA_L-digitata_M_contig97638.1.1 vs. uniprot
Match: A0A537QL06_9PROT (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QL06_9PROT)

HSP 1 Score: 260 bits (664), Expect = 9.450e-86
Identity = 127/162 (78.40%), Postives = 145/162 (89.51%), Query Frame = 0
Query:    1 EIVYRDKSIADVLAMTVEEGREFFKAVPSIRDKLETLERVGLSYIQVGQAATTLSGGEAQRVKLAKELSRRATGKTIYILDEPTTGLHYHDVRKLLEVLDALVEQGNTVVVIEHNLEVIKTADWILDLGPEGGDKGGEIVASGTPEDICAEQRSYTGAFLTP 162
            E+++R KSIADVL MTV+EG +FF+AVPSIRDKL TL++VGL YI +GQ ATTLSGGEAQRVKLAKELSRRATG+T+YILDEPTTGLH+ DVRKLLEVL ALVE GNTV+VIEHNLEVIKTADWI+DLGPEGGD GG IVA+GTPEDI + + SYTG +L P
Sbjct:   56 EVLFRGKSIADVLDMTVDEGADFFRAVPSIRDKLLTLQQVGLGYIHIGQPATTLSGGEAQRVKLAKELSRRATGRTLYILDEPTTGLHFDDVRKLLEVLHALVETGNTVLVIEHNLEVIKTADWIIDLGPEGGDAGGHIVATGTPEDIASSEASYTGQYLRP 217          
BLAST of mRNA_L-digitata_M_contig97638.1.1 vs. uniprot
Match: A0A2E2RKZ7_9HYPH (Excinuclease ABC subunit A (Fragment) n=1 Tax=Ahrensia sp. TaxID=1872419 RepID=A0A2E2RKZ7_9HYPH)

HSP 1 Score: 259 bits (661), Expect = 1.940e-85
Identity = 126/160 (78.75%), Postives = 143/160 (89.38%), Query Frame = 0
Query:    1 EIVYRDKSIADVLAMTVEEGREFFKAVPSIRDKLETLERVGLSYIQVGQAATTLSGGEAQRVKLAKELSRRATGKTIYILDEPTTGLHYHDVRKLLEVLDALVEQGNTVVVIEHNLEVIKTADWILDLGPEGGDKGGEIVASGTPEDICAEQRSYTGAFL 160
            E+ ++ KSIADVL MTVEEG EFF AVP++RDKL+TL+RVGL YI++GQ ATTLSGGEAQRVKLAKELSR+ATGKT+YILDEPTTGLH+HDV KLLEVL  LV+ GNTV+VIEHNLEVIKTADWI+DLGPEGGD GGEIVA+GTPE +  E RSYTG FL
Sbjct:   45 EVQFKGKSIADVLEMTVEEGVEFFAAVPAVRDKLDTLKRVGLGYIKIGQQATTLSGGEAQRVKLAKELSRKATGKTLYILDEPTTGLHFHDVAKLLEVLHELVDTGNTVIVIEHNLEVIKTADWIIDLGPEGGDGGGEIVATGTPEQVIEEPRSYTGQFL 204          
BLAST of mRNA_L-digitata_M_contig97638.1.1 vs. uniprot
Match: A0A351T6W8_9PROT (Excinuclease ABC subunit A (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T6W8_9PROT)

HSP 1 Score: 259 bits (662), Expect = 2.100e-85
Identity = 126/162 (77.78%), Postives = 143/162 (88.27%), Query Frame = 0
Query:    1 EIVYRDKSIADVLAMTVEEGREFFKAVPSIRDKLETLERVGLSYIQVGQAATTLSGGEAQRVKLAKELSRRATGKTIYILDEPTTGLHYHDVRKLLEVLDALVEQGNTVVVIEHNLEVIKTADWILDLGPEGGDKGGEIVASGTPEDICAEQRSYTGAFLTP 162
            E+ +RDKSIAD+L MTVE+  EFFKAVP++RDKL TL+RVGL YI+VGQ ATTLSGGEAQRVKLAKELS+RATG+T+YILDEPTTGLH+ DVRKLLEVL  LV+ GNTVVVIEHNLEVIKTADW++DLGPEGGD GG IVA+GTPED+ A   SYTG FL P
Sbjct:   37 EVTFRDKSIADILDMTVEDAAEFFKAVPAVRDKLVTLKRVGLGYIKVGQQATTLSGGEAQRVKLAKELSKRATGRTLYILDEPTTGLHFEDVRKLLEVLQELVDSGNTVVVIEHNLEVIKTADWLIDLGPEGGDGGGLIVAAGTPEDVAANTDSYTGRFLAP 198          
BLAST of mRNA_L-digitata_M_contig97638.1.1 vs. uniprot
Match: A0A2W4TK59_9PROT (Excinuclease ABC subunit A (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4TK59_9PROT)

HSP 1 Score: 261 bits (668), Expect = 3.150e-85
Identity = 128/160 (80.00%), Postives = 141/160 (88.12%), Query Frame = 0
Query:    1 EIVYRDKSIADVLAMTVEEGREFFKAVPSIRDKLETLERVGLSYIQVGQAATTLSGGEAQRVKLAKELSRRATGKTIYILDEPTTGLHYHDVRKLLEVLDALVEQGNTVVVIEHNLEVIKTADWILDLGPEGGDKGGEIVASGTPEDICAEQRSYTGAFL 160
            E+ YRDKSIADVL MTVEEG  FF+AVP+IRDKLETL RVGL YI++GQ ATTLSGGEAQRVKLAKELSRRATG+T+YILDEPTTGLH+HDV KLLEVL  LV+ GNTVVVIEHNLEVIKTADWI+DLGPEGGD GG +VA GTPED+ A   SYTG +L
Sbjct:  129 EVTYRDKSIADVLDMTVEEGAAFFQAVPAIRDKLETLARVGLGYIKIGQQATTLSGGEAQRVKLAKELSRRATGRTLYILDEPTTGLHFHDVAKLLEVLHELVDAGNTVVVIEHNLEVIKTADWIIDLGPEGGDAGGRVVAVGTPEDVAANPESYTGQYL 288          
BLAST of mRNA_L-digitata_M_contig97638.1.1 vs. uniprot
Match: UPI000FD3B0F5 (ATP-binding cassette domain-containing protein n=1 Tax=Mesorhizobium sp. M2A.F.Ca.ET.067.02.1.1 TaxID=2496749 RepID=UPI000FD3B0F5)

HSP 1 Score: 258 bits (659), Expect = 2.160e-84
Identity = 126/160 (78.75%), Postives = 142/160 (88.75%), Query Frame = 0
Query:    1 EIVYRDKSIADVLAMTVEEGREFFKAVPSIRDKLETLERVGLSYIQVGQAATTLSGGEAQRVKLAKELSRRATGKTIYILDEPTTGLHYHDVRKLLEVLDALVEQGNTVVVIEHNLEVIKTADWILDLGPEGGDKGGEIVASGTPEDICAEQRSYTGAFL 160
            +++++ KSIADVL MTVEEG EFF AVP +RDKL TL +VGL YI +GQ ATTLSGGEAQR+KLAKELSR+ATGKT+YILDEPTTGLH+HDV KLLEVL  LV+QGNTVVVIEHNLEVIKTADW+LDLGPEGGD GGE+VASGTPE I  E+RSYTG FL
Sbjct:   97 DVLFKGKSIADVLDMTVEEGVEFFSAVPGVRDKLVTLNQVGLGYIHIGQQATTLSGGEAQRIKLAKELSRKATGKTLYILDEPTTGLHFHDVAKLLEVLHELVDQGNTVVVIEHNLEVIKTADWVLDLGPEGGDGGGELVASGTPEAIVREKRSYTGKFL 256          
BLAST of mRNA_L-digitata_M_contig97638.1.1 vs. uniprot
Match: A0A526YPQ2_9HYPH (ATP-binding cassette domain-containing protein (Fragment) n=8 Tax=Hyphomicrobiales TaxID=356 RepID=A0A526YPQ2_9HYPH)

HSP 1 Score: 259 bits (662), Expect = 2.190e-84
Identity = 126/157 (80.25%), Postives = 143/157 (91.08%), Query Frame = 0
Query:    1 EIVYRDKSIADVLAMTVEEGREFFKAVPSIRDKLETLERVGLSYIQVGQAATTLSGGEAQRVKLAKELSRRATGKTIYILDEPTTGLHYHDVRKLLEVLDALVEQGNTVVVIEHNLEVIKTADWILDLGPEGGDKGGEIVASGTPEDICAEQRSYTG 157
            +++++ KSIADVL MTVEEG +FF AVP +RDKLETL++VGL YI VGQ ATTLSGGEAQR+KLAKELSR+ATGKT+YILDEPTTGLH+HDV KLLEVL  LV+QGNTVVVIEHNLEVIKTADW+LDLGPEGGD GGE+VASGTPEDI  E+RSYTG
Sbjct:  142 DVLFKGKSIADVLDMTVEEGVDFFAAVPGVRDKLETLKQVGLGYIHVGQQATTLSGGEAQRIKLAKELSRKATGKTLYILDEPTTGLHFHDVAKLLEVLHELVDQGNTVVVIEHNLEVIKTADWVLDLGPEGGDGGGELVASGTPEDIVREKRSYTG 298          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig97638.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7PK16_9PROT9.020e-9191.25UvrABC system protein A n=2 Tax=Alphaproteobacteri... [more]
A0A2E2QA83_9PROT7.990e-8876.05Excinuclease ABC subunit A (Fragment) n=1 Tax=Mica... [more]
A0A827M289_ECOLX1.290e-8780.00ATP-binding cassette domain-containing protein n=2... [more]
A0A2E7I0R6_9PROT1.030e-8685.80UvrABC system protein A n=2 Tax=Alphaproteobacteri... [more]
A0A537QL06_9PROT9.450e-8678.40ATP-binding cassette domain-containing protein (Fr... [more]
A0A2E2RKZ7_9HYPH1.940e-8578.75Excinuclease ABC subunit A (Fragment) n=1 Tax=Ahre... [more]
A0A351T6W8_9PROT2.100e-8577.78Excinuclease ABC subunit A (Fragment) n=1 Tax=Alph... [more]
A0A2W4TK59_9PROT3.150e-8580.00Excinuclease ABC subunit A (Fragment) n=1 Tax=Prot... [more]
UPI000FD3B0F52.160e-8478.75ATP-binding cassette domain-containing protein n=1... [more]
A0A526YPQ2_9HYPH2.190e-8480.25ATP-binding cassette domain-containing protein (Fr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..164
e-value: 2.0E-62
score: 213.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..137
IPR003439ABC transporter-like, ATP-binding domainPFAMPF00005ABC_trancoord: 30..84
e-value: 1.2E-6
score: 29.1
NoneNo IPR availablePANTHERPTHR43152UVRABC SYSTEM PROTEIN Acoord: 2..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig97638contigL-digitata_M_contig97638:477..980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig97638.1.1mRNA_L-digitata_M_contig97638.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig97638 477..980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig97638.1.1 ID=prot_L-digitata_M_contig97638.1.1|Name=mRNA_L-digitata_M_contig97638.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=168bp
EIVYRDKSIADVLAMTVEEGREFFKAVPSIRDKLETLERVGLSYIQVGQA
ATTLSGGEAQRVKLAKELSRRATGKTIYILDEPTTGLHYHDVRKLLEVLD
ALVEQGNTVVVIEHNLEVIKTADWILDLGPEGGDKGGEIVASGTPEDICA
EQRSYTGAFLTPXXXXH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003439ABC_transporter-like_ATP-bd