prot_L-digitata_M_contig97586.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig97586.2.1
Unique Nameprot_L-digitata_M_contig97586.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length106
Homology
BLAST of mRNA_L-digitata_M_contig97586.2.1 vs. uniprot
Match: A0A6H5K5P3_9PHAE (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P3_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 2.480e-42
Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 0
Query:    1 VLSWEFSTREPWHIPSTQQLIRPGPRWRQYLVRPDFLGAVFDVYHRVR--GPACCCSLGSGGNLPHSLRQLLLQLSSVQGDVFDNDEEKKAYASFLVKGATAVLSSP 105
            VLSWEF   E W IP  QQLIRPGPRWR YLVRPDFLGAVF+VYHRVR  G A     G GG LPH+LRQLLLQLSSV GD+F+ND+++KAYASFLV+GA AVL++P
Sbjct:  230 VLSWEFKYVEAWQIPPAQQLIRPGPRWRTYLVRPDFLGAVFNVYHRVRLRGTA-----GPGGTLPHALRQLLLQLSSVHGDIFENDDQRKAYASFLVEGAAAVLAAP 331          
BLAST of mRNA_L-digitata_M_contig97586.2.1 vs. uniprot
Match: D7FX52_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX52_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 4.590e-42
Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 0
Query:    1 VLSWEFSTREPWHIPSTQQLIRPGPRWRQYLVRPDFLGAVFDVYHRVR--GPACCCSLGSGGNLPHSLRQLLLQLSSVQGDVFDNDEEKKAYASFLVKGATAVLSSP 105
            VLSWEF   E W IP  QQLIRPGPRWR YLVRPDFLGAVF+VYHRVR  G A     G GG LPH+LRQLLLQLSSV GD+F+ND+++KAYASFLV+GA AVL++P
Sbjct:  230 VLSWEFKYVEAWQIPPAQQLIRPGPRWRAYLVRPDFLGAVFNVYHRVRLRGTA-----GPGGTLPHALRQLLLQLSSVHGDIFENDDQRKAYASFLVEGAAAVLAAP 331          
BLAST of mRNA_L-digitata_M_contig97586.2.1 vs. uniprot
Match: A0A7S3PXS9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXS9_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.050e-20
Identity = 51/104 (49.04%), Postives = 63/104 (60.58%), Query Frame = 0
Query:    1 VLSWEF-STREPWHIPSTQQLIRPGPRWRQYLVRPDFLGAVFDVYHRVRGPACCCSLGSGGNLPHSLRQLLLQLSSVQGDVFDNDEEKKAYASFLVKGATAVLS 103
            VLSWEF S    W    +  L+RP   WR+YL+RPDFLGAVF VY  +R  A        G L HSLRQLL+ LSS+ G VF +  +K AY  F++ G  +VLS
Sbjct:  301 VLSWEFGSLGGKWGRTGSSALVRPPESWREYLIRPDFLGAVFQVYTSIRNEAGAAV----GKLKHSLRQLLILLSSITGIVFLDKNQKNAYCGFMIDGCMSVLS 400          
BLAST of mRNA_L-digitata_M_contig97586.2.1 vs. uniprot
Match: A0A7S4I7Z2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I7Z2_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 3.570e-17
Identity = 55/118 (46.61%), Postives = 66/118 (55.93%), Query Frame = 0
Query:    1 VLSWEFST---REPWHIPSTQQ--------LIRPGPRWRQYLVRPDFLGAVFDVYHRVRG----PACCCSLGSGGNLPHSLRQLLLQLSSVQGDVFDNDEEKKAYASFLVKGATAVLS 103
            VL WEF++   R  + I S+          L+RP  RWR  LVRPDFLGAVF VY  VRG    P      G+   L H +RQLLL LSSV G VF +  ++ AYA+FLV G    LS
Sbjct:  129 VLGWEFNSSGGRSTFEISSSSSSFSSGKSTLVRPPERWRDVLVRPDFLGAVFAVYGGVRGAPGRPRLVVVRGTDA-LAHGVRQLLLLLSSVTGIVFADANQRLAYANFLVDGCLTALS 245          
BLAST of mRNA_L-digitata_M_contig97586.2.1 vs. uniprot
Match: A0A7S2PDL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PDL1_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.370e-15
Identity = 43/94 (45.74%), Postives = 54/94 (57.45%), Query Frame = 0
Query:    1 VLSWEFSTREPWH---------IPSTQQLIRPGPRWRQYLVRPDFLGAVFDVYHRVRGPACCCSLGSGG----NLPHSLRQLLLQLSSVQGDVF 81
            +LSWEF     W+         + ++  LI+P   WR YL+RPDFLGAV +VY  VR    C +   GG    +L H LRQLLLQLSSV G +F
Sbjct:   34 ILSWEFGGGSAWNAASFASSAQVSASLVLIKPPVEWRDYLIRPDFLGAVVNVYTYVRS---CVANNLGGQKTVDLGHHLRQLLLQLSSVSGGIF 124          
BLAST of mRNA_L-digitata_M_contig97586.2.1 vs. uniprot
Match: K0R4W3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4W3_THAOC)

HSP 1 Score: 76.3 bits (186), Expect = 5.990e-14
Identity = 49/119 (41.18%), Postives = 63/119 (52.94%), Query Frame = 0
Query:    1 VLSWEF-STREPWHIPSTQQ-------LIRPGPRWRQYLVRPDFLGAVFDVYHRVR----GPACCCSLGSGGNLPHSLRQLLLQLSSV-QGDVFDNDEEKKAYASFLVKGATAVLSSPL 106
            VLSWEF ++   W   S          L+RP  RWR  L+ P+FLGA+F  +  VR    G      +   G + H LRQLLLQLSSV  G VF ++ E+ AY+ FL+ G    L S L
Sbjct:  320 VLSWEFGASAGKWDFASGSSRRGCYSVLLRPPQRWRDTLINPEFLGAMFSCHKSVRVGRDGDQPRILVEKRGRMAHVLRQLLLQLSSVASGPVFSDENERAAYSGFLLDGCLNALESIL 438          
BLAST of mRNA_L-digitata_M_contig97586.2.1 vs. uniprot
Match: A0A1E7F075_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F075_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.040e-11
Identity = 39/110 (35.45%), Postives = 65/110 (59.09%), Query Frame = 0
Query:    1 VLSWEFSTR--EPWHIPSTQ--QLIRPGPRWRQYLVRPDFLGAVFDVYHRV--RGPACCCSLGSGGNLPHSLRQLLLQLSSVQGDVFDNDEEKKAYASFLVKGATAVLSS 104
            V+ WEF +   +    P++    L+RP   WR  L++P+F+ A+F V+ RV    P+    LG      HS+RQL+L L+S+ GD+F   EE+  +A+FL++G   +L++
Sbjct:  310 VIGWEFGSNAWDSGGFPTSNGSALVRPPVAWRSVLIQPEFVKAIFLVHSRVVHNTPSPSNDLG------HSIRQLILLLASIFGDIFPTPEEQTTFAAFLLEGILHLLTT 413          
BLAST of mRNA_L-digitata_M_contig97586.2.1 vs. uniprot
Match: A0A6U3RHZ0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RHZ0_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 5.640e-11
Identity = 37/118 (31.36%), Postives = 64/118 (54.24%), Query Frame = 0
Query:    1 VLSWEFSTREPWHIPSTQQ------------LIRPGPRWRQYLVRPDFLGAVFDVYHRVRGPACCCSLGSGGNLPHSLRQLLLQLSSVQGDVFDNDEEKKAYASFLVKGATAVLSSPL 106
            VLSW+F ++   H  S+              L+RP   W   +++P+FL A+F +Y          S     ++ H++RQ+LLQLSS+ GD++ + E K  YA++ ++G  ++LS+ L
Sbjct:  318 VLSWDFGSQGLHHWDSSSSSVDNNKQSKYTILVRPPTSWSTMVLQPEFLSAMFHLY----------STNPKDSMAHAIRQVLLQLSSITGDIYTSMELKVGYATYFLEGVLSILSTLL 425          
BLAST of mRNA_L-digitata_M_contig97586.2.1 vs. uniprot
Match: A0A7S2W467_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W467_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 7.510e-11
Identity = 34/90 (37.78%), Postives = 56/90 (62.22%), Query Frame = 0
Query:   19 QLIRPGPRWRQYLVRPDFLGAVFDVYHRVRGPACCCSLGSGG-NLPHSLRQLLLQLSSVQGDVFDNDEEKKAYASFLVKGAT-AVLSSPL 106
            ++I+PGP WR  LV  + +  +F +Y   R  +   + GSG  N+ H +RQLL+ L SV GD+F++DE +  Y + L+ G+   V++SP+
Sbjct:  259 EIIKPGPSWRMVLVGGNLIQTLFQLYDGTRASSIG-NTGSGAENVSHQIRQLLVFLGSVNGDIFESDEMRANYVNLLISGSLFGVVASPM 347          
BLAST of mRNA_L-digitata_M_contig97586.2.1 vs. uniprot
Match: A0A448YZD5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZD5_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.430e-10
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 0
Query:    1 VLSWEFSTREPWH---IPSTQQ--LIRPGPRWRQYLVRPDFLGAVFDVYHRVRGPACCCSLGSGGNLPHSLRQLLLQLSSVQGDVFDNDEEKKAYASFLVKGATAVL 102
            V+ WEF T + W     P+ +   L+RP   WR  LV+P+F+ A+F V+ RV   +      S   L HS+RQL+L LSS+ G +F   E++  +ASFL++G   +L
Sbjct:  297 VIGWEFGT-DAWDSGGFPTFKGSVLVRPPVAWRSVLVQPEFVKAIFLVHSRVAHNSNG-QPSSSPELAHSIRQLILLLSSLFGPIFPTPEDQTTFASFLLEGILHLL 401          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig97586.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5K5P3_9PHAE2.480e-4271.96Importin N-terminal domain-containing protein n=1 ... [more]
D7FX52_ECTSI4.590e-4271.96Importin N-terminal domain-containing protein n=1 ... [more]
A0A7S3PXS9_9STRA1.050e-2049.04Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4I7Z2_9STRA3.570e-1746.61Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2PDL1_9STRA2.370e-1545.74Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
K0R4W3_THAOC5.990e-1441.18Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A1E7F075_9STRA4.040e-1135.45Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A6U3RHZ0_9STRA5.640e-1131.36Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2W467_9STRA7.510e-1137.78Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A448YZD5_9STRA1.430e-1038.32Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12596:SF1EXPORTIN-4coord: 1..104
IPR044189Exportin 4/7-likePANTHERPTHR12596EXPORTIN 4,7-RELATEDcoord: 1..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig97586contigL-digitata_M_contig97586:138..878 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig97586.2.1mRNA_L-digitata_M_contig97586.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig97586 138..878 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig97586.2.1 ID=prot_L-digitata_M_contig97586.2.1|Name=mRNA_L-digitata_M_contig97586.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=106bp
VLSWEFSTREPWHIPSTQQLIRPGPRWRQYLVRPDFLGAVFDVYHRVRGP
ACCCSLGSGGNLPHSLRQLLLQLSSVQGDVFDNDEEKKAYASFLVKGATA
VLSSPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044189XPO4/7-like