prot_L-digitata_M_contig97570.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig97570.1.1
Unique Nameprot_L-digitata_M_contig97570.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length64
Homology
BLAST of mRNA_L-digitata_M_contig97570.1.1 vs. uniprot
Match: A0A6H5J883_9PHAE (GT20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J883_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 7.960e-36
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0
Query:    2 FAKVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ 64
            FA VVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ
Sbjct:   10 FANVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ 72          
BLAST of mRNA_L-digitata_M_contig97570.1.1 vs. uniprot
Match: D8LRB5_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB5_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 1.210e-30
Identity = 54/59 (91.53%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    6 VSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ 64
            V    +DGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ
Sbjct:  219 VEEAERDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ 277          
BLAST of mRNA_L-digitata_M_contig97570.1.1 vs. uniprot
Match: K3W821_GLOUD (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W821_GLOUD)

HSP 1 Score: 103 bits (258), Expect = 1.990e-24
Identity = 42/64 (65.62%), Postives = 53/64 (82.81%), Query Frame = 0
Query:    1 RFAKVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ 64
            RFA+ V+ VY+DGD+VW+HDY LM +P  LRK HP C++ WFLHTPFPSSE+YR LPV KQ+L+
Sbjct:  255 RFAQAVNQVYRDGDYVWIHDYHLMNLPALLRKRHPRCKIGWFLHTPFPSSEMYRTLPVGKQILE 318          
BLAST of mRNA_L-digitata_M_contig97570.1.1 vs. uniprot
Match: A0A5D6Y7E3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7E3_9STRA)

HSP 1 Score: 102 bits (255), Expect = 5.070e-24
Identity = 43/64 (67.19%), Postives = 52/64 (81.25%), Query Frame = 0
Query:    1 RFAKVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ 64
            RFA+ V+ VY++GD+VWVHDY LM +P  LRK HP C + WFLHTPFPSSE+YR LPV KQ+LQ
Sbjct:  259 RFAQAVNQVYREGDYVWVHDYHLMNLPSLLRKRHPKCTIGWFLHTPFPSSEMYRTLPVGKQILQ 322          
BLAST of mRNA_L-digitata_M_contig97570.1.1 vs. uniprot
Match: A0A8K1CD86_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD86_PYTOL)

HSP 1 Score: 100 bits (248), Expect = 4.480e-23
Identity = 40/64 (62.50%), Postives = 53/64 (82.81%), Query Frame = 0
Query:    1 RFAKVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ 64
            RFA+ V+ VY+DGD+VW+HDY LM +P  LRK HP C++ WFLHTPFPS+E++R LPV KQ+L+
Sbjct:  287 RFAQAVNQVYRDGDYVWIHDYHLMTLPSLLRKRHPKCKIGWFLHTPFPSAEMFRQLPVGKQILE 350          
BLAST of mRNA_L-digitata_M_contig97570.1.1 vs. uniprot
Match: A0A225VGT2_9STRA (Alpha,alpha-trehalose-phosphate synthase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VGT2_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 2.130e-22
Identity = 38/64 (59.38%), Postives = 53/64 (82.81%), Query Frame = 0
Query:    1 RFAKVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ 64
            RFA+ V+ VY++GD VWVHDY LM +P  LR  HPNC++ WFLHTPFP++E+YR+LPV +++L+
Sbjct:  300 RFAQAVNQVYREGDFVWVHDYHLMMLPSLLRSRHPNCKIGWFLHTPFPTAEMYRMLPVGREILE 363          
BLAST of mRNA_L-digitata_M_contig97570.1.1 vs. uniprot
Match: A0A2D4C5H4_PYTIN (Alpha,alpha-trehalose-phosphate synthase (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5H4_PYTIN)

HSP 1 Score: 97.4 bits (241), Expect = 3.960e-22
Identity = 39/58 (67.24%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    7 SSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ 64
            +SVY+DGD+VWVHDY LM +P  LRK HP C++ WFLHTPFPS+E+YR+LPV KQ+L+
Sbjct:  271 TSVYRDGDYVWVHDYHLMMLPSLLRKRHPRCKIGWFLHTPFPSAEMYRMLPVGKQILE 328          
BLAST of mRNA_L-digitata_M_contig97570.1.1 vs. uniprot
Match: H3G924_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G924_PHYRM)

HSP 1 Score: 96.3 bits (238), Expect = 8.460e-22
Identity = 37/64 (57.81%), Postives = 53/64 (82.81%), Query Frame = 0
Query:    1 RFAKVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ 64
            RFA+ V+ VY++GD VWVHDY LM +P  LR  HP+C++ WFLHTPFP++E+YR+LPV +++L+
Sbjct:  125 RFAQAVNQVYREGDFVWVHDYHLMMLPSLLRSRHPHCKIGWFLHTPFPTAEMYRMLPVGREILE 188          
BLAST of mRNA_L-digitata_M_contig97570.1.1 vs. uniprot
Match: A0A0P1AKT3_PLAHL (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKT3_PLAHL)

HSP 1 Score: 95.9 bits (237), Expect = 1.370e-21
Identity = 38/64 (59.38%), Postives = 51/64 (79.69%), Query Frame = 0
Query:    1 RFAKVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ 64
            RFA+ V+ VY+DGD VWVHDY LM +P  LR  HP C++ WFLHTPFP++E+YR LPV +++L+
Sbjct:  234 RFAQAVNQVYRDGDFVWVHDYHLMTLPSLLRARHPQCKIGWFLHTPFPTAEMYRTLPVGREILE 297          
BLAST of mRNA_L-digitata_M_contig97570.1.1 vs. uniprot
Match: D0NRZ0_PHYIT (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=3 Tax=Phytophthora TaxID=4783 RepID=D0NRZ0_PHYIT)

HSP 1 Score: 95.9 bits (237), Expect = 1.380e-21
Identity = 38/64 (59.38%), Postives = 52/64 (81.25%), Query Frame = 0
Query:    1 RFAKVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSSEIYRILPVRKQLLQ 64
            RFA+ V+ VY++GD VWVHDY LM +P  LR  HP C+V WFLHTPFP++E+YR+LPV +++L+
Sbjct:  310 RFAQAVNQVYREGDFVWVHDYHLMMLPSLLRARHPQCKVGWFLHTPFPTAEMYRMLPVGREILE 373          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig97570.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J883_9PHAE7.960e-3698.41GT20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRB5_ECTSI1.210e-3091.53Trehalose 6-phosphate synthase, family GT20 / Treh... [more]
K3W821_GLOUD1.990e-2465.63Alpha,alpha-trehalose-phosphate synthase (UDP-form... [more]
A0A5D6Y7E3_9STRA5.070e-2467.19Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1CD86_PYTOL4.480e-2362.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225VGT2_9STRA2.130e-2259.38Alpha,alpha-trehalose-phosphate synthase n=1 Tax=P... [more]
A0A2D4C5H4_PYTIN3.960e-2267.24Alpha,alpha-trehalose-phosphate synthase (Fragment... [more]
H3G924_PHYRM8.460e-2257.81Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A0P1AKT3_PLAHL1.370e-2159.38Alpha,alpha-trehalose-phosphate synthase (UDP-form... [more]
D0NRZ0_PHYIT1.380e-2159.38Alpha,alpha-trehalose-phosphate synthase (UDP-form... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2000Glycogen Phosphorylase B;coord: 1..64
e-value: 3.5E-29
score: 103.8
NoneNo IPR availablePANTHERPTHR10788:SF106ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 1coord: 2..64
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 1..63
IPR001830Glycosyl transferase, family 20PFAMPF00982Glyco_transf_20coord: 1..64
e-value: 8.6E-27
score: 94.0
IPR001830Glycosyl transferase, family 20PANTHERPTHR10788TREHALOSE-6-PHOSPHATE SYNTHASEcoord: 2..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig97570contigL-digitata_M_contig97570:384..575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig97570.1.1mRNA_L-digitata_M_contig97570.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig97570 384..575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig97570.1.1 ID=prot_L-digitata_M_contig97570.1.1|Name=mRNA_L-digitata_M_contig97570.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=64bp
RFAKVVSSVYKDGDHVWVHDYQLMQVPYELRKLHPNCRVAWFLHTPFPSS
EIYRILPVRKQLLQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001830Glyco_trans_20