prot_L-digitata_M_contig97543.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig97543.2.1
Unique Nameprot_L-digitata_M_contig97543.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length67
Homology
BLAST of mRNA_L-digitata_M_contig97543.2.1 vs. uniprot
Match: A0A6H5JMI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMI6_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.040e-7
Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 0
Query:    5 EPPNEYLARGSVLRSQLSTHGTVITDINAYQHYARNLPPTFEVQKSIVLTNAELTYQVIEDVV 67
            E P  YL R SVLR +L  +  V +D +A  HYARNL P F VQ+S++L + E   +++E V+
Sbjct:  734 EEPRRYLTRASVLRQKLEAYDWVQSDHDANVHYARNLLPDFNVQRSVLLAHPEFKTELVEKVI 796          
BLAST of mRNA_L-digitata_M_contig97543.2.1 vs. uniprot
Match: A0A6H5K2E9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2E9_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 4.950e-7
Identity = 26/67 (38.81%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    1 MKDDEPPNEYLARGSVLRSQLSTHGTVITDINAYQHYARNLPPTFEVQKSIVLTNAELTYQVIEDVV 67
            M++ E P +Y+AR   LR +L++ GT+    +AY+   R LPP++ VQK I+L +  +T   +E VV
Sbjct:  243 MRESENPQDYIARSEALRLRLASVGTIKDTTHAYKDVVRGLPPSYAVQKGILLASDVVTLHALETVV 309          
BLAST of mRNA_L-digitata_M_contig97543.2.1 vs. uniprot
Match: A0A6H5JL48_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL48_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 4.990e-7
Identity = 26/67 (38.81%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    1 MKDDEPPNEYLARGSVLRSQLSTHGTVITDINAYQHYARNLPPTFEVQKSIVLTNAELTYQVIEDVV 67
            M++ E P +Y+AR   LR +L++ GT+    +AY+   R LPP++ VQK I+L +  +T   +E VV
Sbjct:  243 MRESENPQDYIARSEALRLRLASVGTIKDTTHAYKDVVRGLPPSYAVQKGILLASDVVTLHALETVV 309          
BLAST of mRNA_L-digitata_M_contig97543.2.1 vs. uniprot
Match: A0A6H5L5I8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5I8_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 4.990e-7
Identity = 26/67 (38.81%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    1 MKDDEPPNEYLARGSVLRSQLSTHGTVITDINAYQHYARNLPPTFEVQKSIVLTNAELTYQVIEDVV 67
            M++ E P +Y+AR   LR +L++ GT+    +AY+   R LPP++ VQK I+L +  +T   +E VV
Sbjct:  243 MRESENPQDYIARSEALRLRLASVGTIKDTTHAYKDVVRGLPPSYAVQKGILLASDVVTLHALETVV 309          
BLAST of mRNA_L-digitata_M_contig97543.2.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 5.010e-7
Identity = 26/67 (38.81%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    1 MKDDEPPNEYLARGSVLRSQLSTHGTVITDINAYQHYARNLPPTFEVQKSIVLTNAELTYQVIEDVV 67
            M++ E P +Y+AR   LR +L++ GT+    +AY+   R LPP++ VQK I+L +  +T   +E VV
Sbjct:  389 MRESENPQDYIARSEALRLRLASVGTIKDTTHAYKDVVRGLPPSYAVQKGILLASDVVTLHALETVV 455          
BLAST of mRNA_L-digitata_M_contig97543.2.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 5.010e-7
Identity = 26/67 (38.81%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    1 MKDDEPPNEYLARGSVLRSQLSTHGTVITDINAYQHYARNLPPTFEVQKSIVLTNAELTYQVIEDVV 67
            M++ E P +Y+AR   LR +L++ GT+    +AY+   R LPP++ VQK I+L +  +T   +E VV
Sbjct:  243 MRESENPQDYIARSEALRLRLASVGTIKDTTHAYKDVVRGLPPSYAVQKGILLASDVVTLHALETVV 309          
BLAST of mRNA_L-digitata_M_contig97543.2.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 5.030e-7
Identity = 26/67 (38.81%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    1 MKDDEPPNEYLARGSVLRSQLSTHGTVITDINAYQHYARNLPPTFEVQKSIVLTNAELTYQVIEDVV 67
            M++ E P +Y+AR   LR +L++ GT+    +AY+   R LPP++ VQK I+L +  +T   +E VV
Sbjct:  243 MRESENPQDYIARSEALRLRLASVGTIKDTTHAYKDVVRGLPPSYAVQKGILLASDVVTLHALETVV 309          
BLAST of mRNA_L-digitata_M_contig97543.2.1 vs. uniprot
Match: A0A6H5JC89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC89_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 1.250e-6
Identity = 26/67 (38.81%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    1 MKDDEPPNEYLARGSVLRSQLSTHGTVITDINAYQHYARNLPPTFEVQKSIVLTNAELTYQVIEDVV 67
            M++ E P +Y+AR   L+ +L++ GT+    +AY+   R LPP+F VQK I+L +  +T   +E VV
Sbjct:  108 MRESENPQDYMARSEALQLRLASVGTIKDTTHAYKDVVRALPPSFAVQKGILLASDVVTLHALETVV 174          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig97543.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JMI6_9PHAE1.040e-744.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2E9_9PHAE4.950e-738.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JL48_9PHAE4.990e-738.81Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5L5I8_9PHAE4.990e-738.81Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J4N2_9PHAE5.010e-738.81Integrase catalytic domain-containing protein n=18... [more]
A0A6H5L867_9PHAE5.010e-738.81Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBD4_9PHAE5.030e-738.81Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JC89_9PHAE1.250e-638.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig97543contigL-digitata_M_contig97543:232..432 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig97543.2.1mRNA_L-digitata_M_contig97543.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig97543 229..432 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig97543.2.1 ID=prot_L-digitata_M_contig97543.2.1|Name=mRNA_L-digitata_M_contig97543.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=67bp
MKDDEPPNEYLARGSVLRSQLSTHGTVITDINAYQHYARNLPPTFEVQKS
IVLTNAELTYQVIEDVV
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