prot_L-digitata_M_contig9748.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9748.1.1
Unique Nameprot_L-digitata_M_contig9748.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length267
Homology
BLAST of mRNA_L-digitata_M_contig9748.1.1 vs. uniprot
Match: D8LTG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG8_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 1.870e-101
Identity = 162/248 (65.32%), Postives = 189/248 (76.21%), Query Frame = 0
Query:    1 ITGAKPASRGVNYPLLGLALVGLGLAKVASIYWELDARMQETSFGSEGCTRYRDMMSPEDIIPVFGGVFVGSSDERRTHITHAIGAEATPWGDLFAIWNVDTPGKDPKTARLELKGFPEGTAFRPHGMHYRQETGELFVINHAYSQGGERIDVFKVSETFPQDPLPTIHPSLLEATPKPAAPETTQKQDSVRKNDNDDNPDPTVTVVDIGVAHAVLGEDTPADGANDNTAQVSIPGGEPTEGDAAKGD 248
            ITG K ASRGVNYPLLGLAL+GL +AK+A++YWE++ R+ +TSFG+EGCTRYRDMMSPEDIIPVF GVFV SSDERR  +  +IGAEA PWGDLFAIW+VDTPG+DPK+A LE++GFPEG AF PHGMHYR ETGELFV+NHAYSQGGERIDVFKVSETFPQD LP +HPSLLE TP        Q++D   K+D          VVDIGVA AVLG+D   +G       V   GG+   G+A  G+
Sbjct:   11 ITGQKVASRGVNYPLLGLALIGLAVAKLATVYWEMEQRVPKTSFGTEGCTRYRDMMSPEDIIPVFEGVFVASSDERRQFVMQSIGAEAAPWGDLFAIWDVDTPGQDPKSAVLEIEGFPEGNAFHPHGMHYRAETGELFVVNHAYSQGGERIDVFKVSETFPQDALPPVHPSLLELTPP-------QEEDEEGKSD----------VVDIGVATAVLGDDEDDEG-------VQAEGGDGLGGEATVGE 234          
BLAST of mRNA_L-digitata_M_contig9748.1.1 vs. uniprot
Match: A0A6H5JRR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR5_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 1.930e-89
Identity = 131/166 (78.92%), Postives = 149/166 (89.76%), Query Frame = 0
Query:    1 ITGAKPASRGVNYPLLGLALVGLGLAKVASIYWELDARMQETSFGSEGCTRYRDMMSPEDIIPVFGGVFVGSSDERRTHITHAIGAEATPWGDLFAIWNVDTPGKDPKTARLELKGFPEGTAFRPHGMHYRQETGELFVINHAYSQGGERIDVFKVSETFPQDPLP 166
            ITG K ASRGVNYPLLGLAL+GL +AK+A++YWE++ R+ +TSFG+EGCTRYRDMMSPEDIIP+F GVFV SSDERR  I  +IGAEA PWGDLFAIW+VDTPG+DPK+A LE++GFPEG AF PHGMHYR ETGELFV+NHAYSQGGERIDVFKVSETFPQD LP
Sbjct:   57 ITGQKVASRGVNYPLLGLALIGLAVAKLATVYWEMEQRVPKTSFGTEGCTRYRDMMSPEDIIPIFEGVFVASSDERRQTIMQSIGAEAAPWGDLFAIWDVDTPGQDPKSAVLEIEGFPEGNAFHPHGMHYRAETGELFVVNHAYSQGGERIDVFKVSETFPQDALP 222          
BLAST of mRNA_L-digitata_M_contig9748.1.1 vs. uniprot
Match: A0A835Z741_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z741_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.570e-16
Identity = 49/111 (44.14%), Postives = 63/111 (56.76%), Query Frame = 0
Query:   49 CTRYRDMMSPEDIIPVFGGVFVGSSDERRT-HITHAIGAEATPWGDLFAIWNVD--TPGKDPKTARLELKGFPEGTAFRPHGMHYRQETGELFVINHAYSQGGERIDVFKV 156
            C R  D +  EDI  V  GV++ +SD+R       A   +A P G L+AI   +      DP   RLEL+ FP G AF PHG+ Y     E +VINHAY++GGER+DVF V
Sbjct:   29 CRRVGDAVGVEDIARVAPGVYLATSDDRMALWEIDAQPVDAVPDGALYAIAVAEGAADAGDPVLTRLELRNFPRGVAFHPHGLFYDAAAREAYVINHAYARGGERVDVFGV 139          
BLAST of mRNA_L-digitata_M_contig9748.1.1 vs. uniprot
Match: I2CS19_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CS19_NANGC)

HSP 1 Score: 68.9 bits (167), Expect = 2.990e-11
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:  108 KTARLELKGFPEGTAFRPHGMHYRQETGELFVINHAYSQGGERIDVFKVS 157
            + A + L  FP+G AF PHGM+Y + T +LFVINHAY +GGERIDVF ++
Sbjct:    9 RVASIPLLDFPKGVAFHPHGMYYHRPTSKLFVINHAYDKGGERIDVFHLT 58          
BLAST of mRNA_L-digitata_M_contig9748.1.1 vs. uniprot
Match: A0A4D9CTG9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTG9_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.530e-11
Identity = 43/118 (36.44%), Postives = 61/118 (51.69%), Query Frame = 0
Query:   59 EDIIPVFGGVFVGSSDER-RTHITHAIGAEATPWGDLFAIWN------VDTPGKD---------------PKTARLELKGFPEGTAFRPHGMHYRQETGELFVINHAYSQGGERIDVF 154
            EDI+ +   +F+  +D+R R       G   TP G L A++       +   G++                + A + L  FP+G AF PHGM+Y + T +LFVINHAY +GGERIDVF
Sbjct:    8 EDIVTLTPSLFITGTDDRLRLWENPDFGPTRTPQGGLVALFEEKEGEGLRKGGREGEMRXXXXXXXXXXXXRVASIPLLDFPKGVAFHPHGMYYHRSTSKLFVINHAYDKGGERIDVF 125          
BLAST of mRNA_L-digitata_M_contig9748.1.1 vs. uniprot
Match: A0A6B2L681_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L681_9EUKA)

HSP 1 Score: 69.7 bits (169), Expect = 5.640e-10
Identity = 59/161 (36.65%), Postives = 82/161 (50.93%), Query Frame = 0
Query:   19 ALVGLGLAKVASIYWELDARMQETSFGSEGCTRY--RDMMSPEDIIPVFGGVFVGSSDERRTHITHAIGAEA-TPWGDLFAIWNVDTPGKDPKTARLELKGFPEGT-AFRPHGMHYRQETGE--LFVINHAYSQGGERIDVFKVSETFPQDPLPTIHPSLL 173
            AL+G  +  V    W L   +  T   ++GC R     ++  ED    + GV +  +D+R +     +G  A TP G LF +   D  G   +  RL L GFP  T AF PHG+   +  G   L+V+NHAY++GGERI+VF VS    +D   T H SLL
Sbjct:   14 ALLGFLVPLVHKYRWALTP-VPLTYAPTDGCVRLTAEGLVGAEDFAE-YKGVLITGTDDRIS--LWELGTPAGTPSGGLFVV---DPVGDGVR--RLNLGGFPWDTLAFHPHGLFLHEHQGAHFLYVVNHAYAKGGERIEVFAVSGEGFEDLEVTHHQSLL 165          
BLAST of mRNA_L-digitata_M_contig9748.1.1 vs. uniprot
Match: A0A7S4IRR6_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IRR6_9EUKA)

HSP 1 Score: 68.9 bits (167), Expect = 1.060e-9
Identity = 40/121 (33.06%), Postives = 60/121 (49.59%), Query Frame = 0
Query:   38 RMQETSFGSEGCTRYRDMMSPEDIIPVFGGVFVGSSDERRTHITHAIGAEATPWGDLFAIWNVDTPGKDPKTARLELKGFPEGTAFRPHGMHYRQETGE--LFVINHAYSQGGERIDVFKV 156
            ++   S  ++ C     ++  ED   V   + +  SD+R T      G E    G L  ++  +    + K A L L+ FP    F PHG+H  +   +  LFVINHAY+ GGER+DVF+V
Sbjct:   28 KVLRVSQNADECQLLEGIVGAEDSAIVSERIVIFGSDDRMTLWEKKGGMEIVQNGSLVVVFAAENG--ETKVATLSLENFPTDVDFHPHGIHLLRNNNQMLLFVINHAYTAGGERVDVFEV 146          
BLAST of mRNA_L-digitata_M_contig9748.1.1 vs. uniprot
Match: A0DR75_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DR75_PARTE)

HSP 1 Score: 68.2 bits (165), Expect = 1.800e-9
Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 0
Query:   18 LALVGLGLAKVASIYWELDARMQETSFGSEGCTRY--RDMMSPEDIIPVFGG-VFVGSSDERRTHITHAIGAEATPWGDLFAIWNVDTPGKDPKTARLELKGFPEGTAFRPHGMHYR--QETGELFVINHAYSQGGERIDVFKVSE 158
            + + G+ LA    +  +LD     T++   G  +Y   D+  PED+       + +GS + ++ +   A G        ++AI N +   K+    +LE+K FP+  A   HG++ R  Q+   LFVINHAY  GGERI+VFK+ E
Sbjct:    6 IVVFGVVLALFFKLASDLDVFKPVTNYNEYGNCKYLKEDIRGPEDMTQYNSTTIIIGSGNFQKVY---AQGKPELEQQGIYAILNSNK--KNYSVLQLEVKNFPKDVALYMHGIYVRKQQDGNYLFVINHAYHNGGERIEVFKIDE 146          
BLAST of mRNA_L-digitata_M_contig9748.1.1 vs. uniprot
Match: A0A7S4ER95_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ER95_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 4.310e-7
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:  108 KTARLELKGFPEGTAFRPHGMHYRQETGELFVINHAYSQGGERIDVFKVS 157
            K   L +  +PEG  F PHG++ R+E   L+VINHAY +GGERIDVF ++
Sbjct:  112 KIQELPIINYPEGVNFHPHGIYIRKEDRTLYVINHAYEKGGERIDVFGIA 161          
BLAST of mRNA_L-digitata_M_contig9748.1.1 vs. uniprot
Match: A0A448Z0G3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0G3_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 7.650e-7
Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = 0
Query:  108 KTARLELKGFPEGTAFRPHGMHYRQETGELFVINHAYSQGGERIDVFKV 156
            K   L +  +PE   F PHGM+ R+E   L+VINHAY  GGERIDVF V
Sbjct:  110 KIQELPIFNYPENIDFHPHGMYIRKEDSTLYVINHAYENGGERIDVFGV 158          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9748.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LTG8_ECTSI1.870e-10165.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRR5_9PHAE1.930e-8978.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z741_9STRA3.570e-1644.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
I2CS19_NANGC2.990e-1158.00Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
A0A4D9CTG9_9STRA3.530e-1136.44Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6B2L681_9EUKA5.640e-1036.65Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A7S4IRR6_9EUKA1.060e-933.06Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0DR75_PARTE1.800e-932.19Uncharacterized protein n=1 Tax=Paramecium tetraur... [more]
A0A7S4ER95_9STRA4.310e-752.00Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448Z0G3_9STRA7.650e-755.10Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 31..174
e-value: 1.2E-8
score: 36.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9748contigL-digitata_M_contig9748:2995..7766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9748.1.1mRNA_L-digitata_M_contig9748.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9748 2994..7766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9748.1.1 ID=prot_L-digitata_M_contig9748.1.1|Name=mRNA_L-digitata_M_contig9748.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=267bp
ITGAKPASRGVNYPLLGLALVGLGLAKVASIYWELDARMQETSFGSEGCT
RYRDMMSPEDIIPVFGGVFVGSSDERRTHITHAIGAEATPWGDLFAIWNV
DTPGKDPKTARLELKGFPEGTAFRPHGMHYRQETGELFVINHAYSQGGER
IDVFKVSETFPQDPLPTIHPSLLEATPKPAAPETTQKQDSVRKNDNDDNP
DPTVTVVDIGVAHAVLGEDTPADGANDNTAQVSIPGGEPTEGDAAKGDAA
EGGGGGGGALEAGGGGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0110426-blade_b-propeller_TolB-like