prot_L-digitata_M_contig974.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig974.2.1
Unique Nameprot_L-digitata_M_contig974.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length181
Homology
BLAST of mRNA_L-digitata_M_contig974.2.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 1.090e-39
Identity = 81/185 (43.78%), Postives = 98/185 (52.97%), Query Frame = 0
Query:    1 GYDGGDCCECTCVDT--DAFTCGLRSHGGFTCLDPSAPCVDDDDATVNPTSEETYYSIPTTTGSPCVPDFASDGDCDVVNNTEECGYDGGDCCACTCVSSIE--FTCGDEDNGGFACIDSSAPCVXXXXXXXXXXXXXXXXXXDFSASFTFEPCMVEFIGDGDCDSSNNSEECGFDGGDCCECTC 181
            G+DGGDCCECTCV    D ++C   +  GF C+DP+APCVDDDD T+                  C P    DG CD  NN E CGYDGGDCC CTCV++ +  ++C        ACID SAPCV                  D +         V  +G+G CD  NN+E CG+DGGDCCECTC
Sbjct:    5 GFDGGDCCECTCVSVYDDDYSCS-STDSGFACVDPTAPCVDDDDITIEQALN-------------CFPREFGDGWCDQENNNEICGYDGGDCCECTCVNAWDDDYSCA----ANSACIDPSAPCVDDD---------------DVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTC 156          
BLAST of mRNA_L-digitata_M_contig974.2.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.940e-37
Identity = 84/188 (44.68%), Postives = 96/188 (51.06%), Query Frame = 0
Query:    1 GYDGGDCCECTCV----DTDAFTCGLRSHGGFTCLDPSAPCVDDDDATVNPTSEETYYSIPTTTGSPCVPDFASDGDCDVVNNTEECGYDGGDCCACTCVS---SIEFTCGDEDNGGFACIDSSAPCVXXXXXXXXXXXXXXXXXXDFSASFTFEPCMVEFIGDGDCDSSNNSEECGFDGGDCCECTC 181
            GYDGGDCCECTC     D D + C    +G F C+DP APCVDDDD T+                  CV     +G CD  NN E CGYD GDCC CTCVS     ++ C   D  GFACID +APCV                  D +         V  +GDG CD  NN+E CG+DGGDCCECTC
Sbjct:   44 GYDGGDCCECTCQNPWGDDDEWFCSKDGYG-FACIDPDAPCVDDDDITIEIAQN-------------CVTSDLGNGYCDEDNNNEICGYDFGDCCECTCVSPWDDDDWYCS-SDGSGFACIDPAAPCVDDD---------------DVTIDMVENCGYVRGLGDGWCDDWNNNELCGYDGGDCCECTC 201          
BLAST of mRNA_L-digitata_M_contig974.2.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 3.790e-37
Identity = 82/187 (43.85%), Postives = 96/187 (51.34%), Query Frame = 0
Query:    1 GYDGGDCCECTCVDTDAFTCGLRSHGGFTCLDPSAPCVDDDDATVNPTSEETYYSIPTTTGSPCVPDFASDGDCDVVNNTEECGYDGGDCCACTCVSS------IEFTCGDEDNGGFACIDSSAPCVXXXXXXXXXXXXXXXXXXDFSASFTFEPCMVEFIGDGDCDSSNNSEECGFDGGDCCECTC 181
            G+DGGDCCECTC D + +TCG   + G+ C+DP A CVDDD  TV+    E  Y           P    +G CD + N E+C YDGGDCC CTC  S          C     GGFACID  APCV                  D   +   + C    IG+G CD SNNS EC +DGGDCCECTC
Sbjct:  113 GFDGGDCCECTCEDGE-YTCG--QYYGYACIDPDATCVDDDAVTVD--MMENCYD----------PSRIGNGACDSLLNNEDCAYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDD----------------DIVTAEMMDLCSTGQIGNGYCDDSNNSPECAYDGGDCCECTC 268          
BLAST of mRNA_L-digitata_M_contig974.2.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 6.770e-37
Identity = 85/189 (44.97%), Postives = 97/189 (51.32%), Query Frame = 0
Query:    1 GYDGGDCCECTCV----DTDAFTCGLRSHGGFTCLDPSAPCVDDDDATVNPTSEETYYSIPTTTGSPCVPDFASDGDCDVVNNTEECGYDGGDCCACTCVSSIEFTCGDEDNGGF----ACIDSSAPCVXXXXXXXXXXXXXXXXXXDFSASFTFEPCMVEFIGDGDCDSSNNSEECGFDGGDCCECTC 181
            GYDGGDCCECTCV    D D + C  +   GF C+DP A CVDDDD TV        + +              DG CD  NN E CGYDGGDCC CTCVS  +    D+D+       ACID  APCV                  D +A    E   V  +GDG CD  NN+E CG+DGGDCCECTC
Sbjct:   20 GYDGGDCCECTCVNPWGDDDDWVCS-KDGSGFACIDPDASCVDDDDITVEIAQNCDTWGL-------------GDGWCDQDNNNEICGYDGGDCCECTCVSPWD----DDDDWACRNYNACIDPDAPCVDDD---------------DITAVMVEECGWVRGVGDGWCDEDNNNELCGYDGGDCCECTC 175          
BLAST of mRNA_L-digitata_M_contig974.2.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 7.910e-37
Identity = 84/188 (44.68%), Postives = 94/188 (50.00%), Query Frame = 0
Query:    2 YDGGDCCECTC------VDTDAFTCGLRSHGGFTCLDPSAPCVDDDDATVNPTSEETYYSIPTTTGSPCVPDFA--SDGDCDVVNNTEECGYDGGDCCACTCVSSIEFTCGDEDNGGFACIDSSAPCVXXXXXXXXXXXXXXXXXXDFSASFTFEPCMVEFIGDGDCDSSNNSEECGFDGGDCCECTC 181
            YDGGDCC CTC         D   CG  +   F C+DP APCV+DDD T           +P      C  +    +DGDCD +NN EECGYDGGDCC CTC+    + CG     GFACID SA C                   D     T E C V  IGDG CD  NN EEC +DGGDCC CTC
Sbjct:  120 YDGGDCCSCTCQVPDDGTGDDGSLCGESAV--FACIDPDAPCVNDDDFTA---------FLPEVVKETCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCLDDF-YECGIR---GFACIDPSAECADD----------------DDVTVDTVENCGVRSIGDGQCDLDNNREECHYDGGDCCSCTC 276          
BLAST of mRNA_L-digitata_M_contig974.2.1 vs. uniprot
Match: D7FSR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 3.190e-36
Identity = 81/186 (43.55%), Postives = 100/186 (53.76%), Query Frame = 0
Query:    2 YDGGDCCECTC-VDTDA---FTCGLRSHGGFTCLDPSAPCVDDDDATVNPTSEETYYSIPTTTGSPCVPDFASDGDCDVVNNTEECGYDGGDCCACTCVS--SIEFTCGDEDNGGFACIDSSAPCVXXXXXXXXXXXXXXXXXXDFSASFTFEPCMVEFIGDGDCDSSNNSEECGFDGGDCCECTC 181
            YD GDCC+CTC +++D    F+C       F C+DP+APCVDDD   V     E  ++               DG C+  NN E+CGYDGGDCC CTCV   S EF C +     FACID +APCV                  D   +   E CM+E++GDG CD+ NN E C +DGGDCCECTC
Sbjct:   12 YDAGDCCQCTCGIESDDLPDFSC-----VDFACVDPNAPCVDDD---VTEGMFEDCFNF-------------GDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTE-----FACIDPTAPCVDD----------------DDVTADALENCMMEYLGDGYCDTYNNIEICDYDGGDCCECTC 155          
BLAST of mRNA_L-digitata_M_contig974.2.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 1.240e-34
Identity = 81/186 (43.55%), Postives = 98/186 (52.69%), Query Frame = 0
Query:    2 YDGGDCCECTCV----DTDAFTCGLRSHGGFTCLDPSAPCVDDDDATVNPTSEETYYSIPTTTGSPCVPDFASDGDCDVVNNTEECGYDGGDCCACTCVS--SIEFTCGDEDNGGFACIDSSAPCVXXXXXXXXXXXXXXXXXXDFSASFTFEPCMVEFIGDGDCDSSNNSEECGFDGGDCCECTC 181
            YD GDCC+CTC     D   F+C       F C+DP+APCVDDD   V     E  ++               DG C+  NN E+CGYDGGDCC CTCV   S EF C +     FACID +APCV                  D   +   E CM+E++GDG CD+ NN+E C +DGGDCCECTC
Sbjct:  161 YDAGDCCQCTCGIESDDLSDFSC-----VDFACVDPNAPCVDDD---VTEGMFEDCFNF-------------GDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTE-----FACIDPTAPCVDD----------------DDVTADALENCMIEYLGDGYCDTYNNNEICDYDGGDCCECTC 304          
BLAST of mRNA_L-digitata_M_contig974.2.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 1.030e-32
Identity = 81/190 (42.63%), Postives = 98/190 (51.58%), Query Frame = 0
Query:    1 GYDGGDCCECTCV-------DTDAFT-CGLRSHGGFTCLDPSAPCVDDDDATVNPTSEETYYSIPTTTGSPCVPDFASDGDCDVVNNTEECGYDGGDCCACTCVSSIEFTCGDEDNGGFACIDSSAPCVXXXXXXXXXXXXXXXXXXDFSASFTFEPC-MVEFIGDGDCDSSNNSEECGFDGGDCCECTC 181
            GYDGGDCCECTC        D D +  CG     GF C+DPSAPCV+DDD TV+   +E+  ++              DG CD+ NN   C YDGGDCC CTC  + +  CG     GFACID  APCV                  D       + C  +  +G+G CD  NN+E C +DGGDCCECTC
Sbjct:  124 GYDGGDCCECTCEVPTDDDWDNDLYVACGE----GFACIDPSAPCVNDDDITVD--VDESCDAV-----------GMGDGYCDMDNNNAACAYDGGDCCECTCEPNNK--CG--GRSGFACIDPGAPCVDD----------------DSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTC 276          
BLAST of mRNA_L-digitata_M_contig974.2.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.090e-31
Identity = 75/182 (41.21%), Postives = 90/182 (49.45%), Query Frame = 0
Query:    2 YDGGDCCECTC--VDTDAFTCGLRSHGGFTCLDPSAPCVDDDDATVNPTSEETYYSIPTTTGSPCVPDFASDGDCDVVNNTEECGYDGGDCCACTCVSSIEFTCGDEDNGGFACIDSSAPCVXXXXXXXXXXXXXXXXXXDFSASFTFEPCMVEFIGDGDCDSSNNSEECGFDGGDCCECTC 181
            YDGGDCCECTC  ++ D + C       F C+DP+APCVDDD  T+     +   + P   G         DG C    NT EC YDGGDCCACTC + ++    D     FACID  A CV                  D +            +GDG CD  NN+E CG+DGGDCCECTC
Sbjct:  304 YDGGDCCECTCESLEDDDWAC----RNNFACVDPNAPCVDDDSVTI-----DMLENCPWAVG-------IGDGYCSEDLNTPECAYDGGDCCACTCQNDVDD---DWXXXXFACIDPEAACVNDD---------------DITVDMFVNCEYPVNVGDGWCDQGNNNEACGYDGGDCCECTC 451          
BLAST of mRNA_L-digitata_M_contig974.2.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 3.570e-31
Identity = 78/185 (42.16%), Postives = 90/185 (48.65%), Query Frame = 0
Query:    2 YDGGDCCECTCVDT--DAFTCGLRSHGGFTCLDPSAPCVDDDDATVNPTSEETYYSIPTTTGSPCVPDFASDGDCDVVNNTEECGYDGGDCCACTCVSSIEFTCGDEDNGG---FACIDSSAPCVXXXXXXXXXXXXXXXXXXDFSASFTFEPCMVEFIGDGDCDSSNNSEECGFDGGDCCECTC 181
            YDGGDCC CTC     D + C       F C+DP A CVDDDD TV+   E   Y +              +G CD  NN E CGYDGGDCC CTC     +   D+ +     FACID SAPCV                  D +         V  IG+G CD +NN EECG+DGGDCC CTC
Sbjct:  147 YDGGDCCSCTCESPYDDDWGCMW-----FACIDPEAACVDDDDITVD-MFENCEYPVD-----------IGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCMEFACIDPSAPCVDDD---------------DITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTC 299          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig974.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0S4_ECTSI1.090e-3943.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FI87_ECTSI1.940e-3744.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEP6_ECTSI3.790e-3743.85Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5JXR2_9PHAE6.770e-3744.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTT4_9PHAE7.910e-3744.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSR3_ECTSI3.190e-3643.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJK5_9PHAE1.240e-3443.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4F9_ECTSI1.030e-3242.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM92_9PHAE1.090e-3141.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3F4_ECTSI3.570e-3142.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 57..91
e-value: 0.0053
score: 19.1
coord: 138..177
e-value: 8.0E-4
score: 25.8
IPR000800Notch domainPFAMPF00066Notchcoord: 149..176
e-value: 1.6E-5
score: 25.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig974contigL-digitata_M_contig974:10744..16269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig974.2.1mRNA_L-digitata_M_contig974.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig974 10744..16269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig974.2.1 ID=prot_L-digitata_M_contig974.2.1|Name=mRNA_L-digitata_M_contig974.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=181bp
GYDGGDCCECTCVDTDAFTCGLRSHGGFTCLDPSAPCVDDDDATVNPTSE
ETYYSIPTTTGSPCVPDFASDGDCDVVNNTEECGYDGGDCCACTCVSSIE
FTCGDEDNGGFACIDSSAPCVDDDDFTMTQDDFYMGYDDDFSASFTFEPC
MVEFIGDGDCDSSNNSEECGFDGGDCCECTC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom