prot_L-digitata_M_contig97056.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig97056.1.1
Unique Nameprot_L-digitata_M_contig97056.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length62
Homology
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BLAST of mRNA_L-digitata_M_contig97056.1.1 vs. uniprot
Match: D7FYE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE1_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 8.460e-11
Identity = 28/36 (77.78%), Postives = 34/36 (94.44%), Query Frame = 0 
Query:   26 KTSFYLTLDADVLCTKEGLSEEDLLPRGKGNFVPEG 61
            +T FYLTLDADVLC+K+ L+EEDLLP+GKGN+VPEG
Sbjct:   27 QTPFYLTLDADVLCSKDQLTEEDLLPQGKGNYVPEG 62
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig97056.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYE1_ECTSI8.460e-1177.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR045499Protein of unknown function DUF6492PFAMPF20102DUF6492coord: 12..60
e-value: 1.6E-10
score: 40.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig97056contigL-digitata_M_contig97056:798..983 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig97056.1.1mRNA_L-digitata_M_contig97056.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig97056 798..983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig97056.1.1 ID=prot_L-digitata_M_contig97056.1.1|Name=mRNA_L-digitata_M_contig97056.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=62bp
MGVVEPWWNKYALQMALKLLASSLVKTSFYLTLDADVLCTKEGLSEEDLL
PRGKGNFVPEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045499DUF6492