prot_L-digitata_M_contig97026.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig97026.2.1
Unique Nameprot_L-digitata_M_contig97026.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length200
Homology
BLAST of mRNA_L-digitata_M_contig97026.2.1 vs. uniprot
Match: A0A2E1Y085_9HYPH (D-alanyl-D-alanine carboxypeptidase n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A2E1Y085_9HYPH)

HSP 1 Score: 211 bits (536), Expect = 1.120e-63
Identity = 115/202 (56.93%), Postives = 145/202 (71.78%), Query Frame = 0
Query:    3 SHNILLGRFAGADGMKTGFVCASGFNIVVSAKQNGRQLVAVVMGALSARDRAERAADLLGAGFAASEAGLPTLATLQPYGEDRTTPADIRAQICTKTSSRNRHDVRDADGRMVFRSPHIQPMTRGPVVVAVGLGGADGPPAANTVQAKAPIPAPWPANAPRPRIVALEQIAPLTDT-----VAVIVGTPAPGIPVPTPRPSL 199
            ++NILLGRFAGADGMKTG+VCASGFN+  SA + GR +VA+V+GAL+  DRA+ AADLL  GF    AG PTLA+LQPYGE R   ADIR  ICT+ + + R+D RD DG++V+RS H+ P+ R PV VAV  GGA GP AANT+ A  P+P+P PA+AP   ++A     P  +T      + + GTPAPGIPVPTPRPS+
Sbjct:  198 NYNILLGRFAGADGMKTGYVCASGFNLAASATRGGRTVVAIVLGALTQEDRADLAADLLAQGFETDPAGKPTLASLQPYGEARDKVADIRGSICTQKAQQARYDGRDFDGKLVYRSSHLHPLNREPVAVAVSTGGATGPAAANTIFADVPVPSPRPADAP---VMAFTTPEPAGETSREAAASQLRGTPAPGIPVPTPRPSI 396          
BLAST of mRNA_L-digitata_M_contig97026.2.1 vs. uniprot
Match: A0A2G1QJJ7_9HYPH (D-alanyl-D-alanine carboxypeptidase n=2 Tax=Zhengella mangrovi TaxID=1982044 RepID=A0A2G1QJJ7_9HYPH)

HSP 1 Score: 192 bits (489), Expect = 1.050e-56
Identity = 104/197 (52.79%), Postives = 137/197 (69.54%), Query Frame = 0
Query:    3 SHNILLGRFAGADGMKTGFVCASGFNIVVSAKQNGRQLVAVVMGALSARDRAERAADLLGAGFAASEAGLPTLATLQPYGEDRTTPADIRAQICTKTSSRNRHDVRDADGRMVFRSPHIQPMTRGPVVVAVGLGGADGPPAANTVQAKAPIPAPWPANAPRPRIVALEQIAPLTDTVAVIVGTPAPGIPVPTPRPSL 199
            ++NILLGRFAGADGMKTG+VCASGFN+  SA ++GR +VA+V+GA S  +RA+ AADLL  GFA   AG PTL TL+PYG++R   A+IR  ICT+ + + R+D RD DG++V+RS ++ PM R PV VAVG GGA GP AANT+ A  P+P P P +AP+  +    Q     +  + + GTPAPGI      PS+
Sbjct:  194 NYNILLGRFAGADGMKTGYVCASGFNLAASATRDGRTVVAIVLGAPSQNERADLAADLLARGFATDPAGKPTLWTLEPYGDNRMQVANIRNDICTQAAQKARYDGRDFDGKLVYRSSYLHPMNRAPVAVAVGTGGATGPAAANTLVADVPVPTPRPDDAPQVALTTPAQDQDQEEITSQLRGTPAPGIXXXXXXPSI 390          
BLAST of mRNA_L-digitata_M_contig97026.2.1 vs. uniprot
Match: A0A231V391_9HYPH (Peptidase_S11 domain-containing protein n=2 Tax=Notoacmeibacter marinus TaxID=1876515 RepID=A0A231V391_9HYPH)

HSP 1 Score: 175 bits (443), Expect = 2.010e-49
Identity = 95/161 (59.01%), Postives = 118/161 (73.29%), Query Frame = 0
Query:    1 MTSHNILLGRFAGADGMKTGFVCASGFNIVVSAKQNGRQLVAVVMGALSARDRAERAADLLGAGFAASEAGLP-TLATLQPYGEDRTTPADIRAQICTKTSSRNRHDVRDADGRMVFRSPHIQPMTRGPVVVAVGLGGADGPPAANTVQAKAPIPAPWPAN 160
            +T+ NIL+GR AGADGMKTG++CASGFN+V SA +NGR +VAVV+GAL  ++RAE+AADLL AGFA   A +  T+ TL  YG   T  ADIR+ ICT  +  NR+D RD DG++++RS +I+PM R PV VAV LGGADGPPA NT     PIPA  PA 
Sbjct:  196 VTNTNILIGRMAGADGMKTGYICASGFNLVASATRNGRTVVAVVLGALDQQERAEKAADLLAAGFATDPATVSDTVLTLPRYGNGGTEVADIRSDICTGEAQLNRYDGRDVDGKLIYRSSNIEPMRRAPVAVAVSLGGADGPPARNTGMVDIPIPAKRPAG 356          
BLAST of mRNA_L-digitata_M_contig97026.2.1 vs. uniprot
Match: A0A3L7JD93_9HYPH (D-alanyl-D-alanine carboxypeptidase n=1 Tax=Notoacmeibacter ruber TaxID=2670375 RepID=A0A3L7JD93_9HYPH)

HSP 1 Score: 155 bits (392), Expect = 6.560e-42
Identity = 87/155 (56.13%), Postives = 108/155 (69.68%), Query Frame = 0
Query:    5 NILLGRFAGADGMKTGFVCASGFNIVVSAKQNGRQLVAVVMGALSARDRAERAADLLGAGFAASEAGLP-TLATLQPYGEDRTTPADIRAQICTKTSSRNRHDVRDADGRMVFRSPHIQPMTRGPVVVAVGLGGADGPPAANTVQAKAPIPAPWP 158
            NIL+GR AGADGMKTG++CASGFN+V SA + GR +VAVV+GAL  + RAE+AADLL AGF    A +  T+ TL   G+D T  ADI   ICT  +  +R+D RD DG+ ++RS +I+PM R PV VAV LGGADGPPA NT     P+  P P
Sbjct:  200 NILIGRMAGADGMKTGYICASGFNLVASATREGRTIVAVVLGALDQQVRAEKAADLLAAGFQTDPATVQDTVQTLPRGGDDGTDVADISNDICTGRAQLDRYDGRDVDGKFIYRSSNIEPMRRDPVTVAVSLGGADGPPARNTGLVDIPVAQPRP 354          
BLAST of mRNA_L-digitata_M_contig97026.2.1 vs. uniprot
Match: UPI0013D724C9 (D-alanyl-D-alanine carboxypeptidase n=2 Tax=Chelativorans TaxID=449972 RepID=UPI0013D724C9)

HSP 1 Score: 152 bits (385), Expect = 2.180e-41
Identity = 83/167 (49.70%), Postives = 112/167 (67.07%), Query Frame = 0
Query:    1 MTSHNILLGRFAGADGMKTGFVCASGFNIVVSAKQNGRQLVAVVMGALSARDRAERAADLLGAGFAASEAGLPTLATLQPYGEDRTTPADIRAQICTKTSSRNRHDVRDADGRMVFRSPHIQPMTRGPVVVAVGLGGADGPPAANTVQAKAPIPAPWPANAPRPRIV 167
            M ++N L+GRF GADGMKTG+VCASGFN+V +A +  R L A+V+GA S  +RAE+AA+LL  GF A     P LA+L+P   D  T  D+R +IC++ +   R  +RD +GR+V  SP+++ MTR P +VAVGLGGADGP +     A  PIP P PA  P+  +V
Sbjct:  205 MPNYNFLIGRFEGADGMKTGYVCASGFNLVATATRGRRTLAAIVLGAQSQVERAEKAAELLAQGFKARGFAAPALASLRPSSPDSNTATDMRPEICSQEAVAKRVKMRDDEGRLVIDSPYVREMTREPRLVAVGLGGADGPESKTPRYANVPIPTPRPAYPPQSAVV 371          
BLAST of mRNA_L-digitata_M_contig97026.2.1 vs. uniprot
Match: A0A432V692_9HYPH (D-alanyl-D-alanine carboxypeptidase n=1 Tax=Pseudaminobacter arsenicus TaxID=1851146 RepID=A0A432V692_9HYPH)

HSP 1 Score: 147 bits (371), Expect = 2.870e-39
Identity = 74/141 (52.48%), Postives = 102/141 (72.34%), Query Frame = 0
Query:    1 MTSHNILLGRFAGADGMKTGFVCASGFNIVVSAKQNGRQLVAVVMGALSARDRAERAADLLGAGFAASEAGLPTLATLQPYGEDRTTPADIRAQICTKTSSRNRHDVRDADGRMVFRSPHIQPMTRGPVVVAVGLGGADGP 141
            M S+N+L+GRF GADGMKTGFVCASG+N++ SA +NGR L AVV+G ++ + RA++AADLL  GFA S +G  T+A L PYGE +T   D+R   C   ++  R  +RD +G+++ +SPH++ MTR P +V V LGGA GP
Sbjct:  198 MKSYNLLVGRFDGADGMKTGFVCASGYNLIGSATRNGRTLAAVVLGQITPQGRADKAADLLAQGFATSASGSLTVAGLIPYGEGQTVATDMREAACGAKAASERTPIRDKNGKLLLKSPHLKDMTREPQLVTVSLGGATGP 338          
BLAST of mRNA_L-digitata_M_contig97026.2.1 vs. uniprot
Match: A0A2P7SAP9_9HYPH (D-alanyl-D-alanine carboxypeptidase n=1 Tax=Mesorhizobium soli TaxID=1295366 RepID=A0A2P7SAP9_9HYPH)

HSP 1 Score: 146 bits (368), Expect = 8.100e-39
Identity = 88/169 (52.07%), Postives = 112/169 (66.27%), Query Frame = 0
Query:    4 HNILLGRFAGADGMKTGFVCASGFNIVVSAKQNGRQLVAVVMGALSARDRAERAADLLGAGFAASEAGLPTLATLQPYGEDRTTPADIRAQICTKTSSRNRHDVRDADGRMVFRSPHIQPMTRGPVVVAVGLGGADGP-PAA----NTVQAKAPIPAP-WPANAPRPRI 166
            +N LLGRFAGADGMKTGFVCASG+N++ SA + GR L AVV+G  +   RA+ AADLLG GF+ S AG  TL++LQPYGE +TTP D+R  +C+K  +  R D  DA GR  F+SP++  + R    V VGLGGA GP PAA    +    KA +P P W  + P P +
Sbjct:  203 YNPLLGRFAGADGMKTGFVCASGYNLIGSATREGRTLAAVVLGERTPWGRADHAADLLGQGFSTSTAGSVTLSSLQPYGEGQTTPTDMRDIVCSKEGASERSDGLDAKGRPKFKSPYMVDLKRELQFVRVGLGGATGPVPAAFAAIDAKNNKADVPIPTWRPDKPAPGV 371          
BLAST of mRNA_L-digitata_M_contig97026.2.1 vs. uniprot
Match: A0A8J7QZS9_9HYPH (D-alanyl-D-alanine carboxypeptidase n=1 Tax=Tianweitania sediminis TaxID=1502156 RepID=A0A8J7QZS9_9HYPH)

HSP 1 Score: 145 bits (365), Expect = 1.870e-38
Identity = 81/171 (47.37%), Postives = 111/171 (64.91%), Query Frame = 0
Query:    1 MTSHNILLGRFAGADGMKTGFVCASGFNIVVSAKQNGRQLVAVVMGALSARDRAERAADLLGAGFAASEAGLPTLATLQPYGEDRTTPADIRAQICTKTSSRNRHDVRDADGRMVFRSPHIQPMTRGPVVVAVGLGGADGPPAANTVQAKAPIPAPWPANAPRPRIVALEQ 171
            M +HN L+GRF GADGMKTG+ C +GFN+  SA +NGRQ++AVV+GA+S   RA R A+LL  G +A+EA  P LA L+P GE+ +   ++RA ICT+ + +     RDA+G+ +  SP +  +TR  VVV+VGLGGA GP +     A  PIP P P  AP    +A  +
Sbjct:  200 MPNHNDLIGRFEGADGMKTGYTCPAGFNVTASATRNGRQVIAVVLGAVSPDARAYRTAELLTEGLSANEADKPLLAELRPTGENLSEAGNMRADICTEEAQQRIAKTRDANGKPLVPSPFLSELTRPRVVVSVGLGGATGPKSTQPRYADVPIPTPRPEYAPDTAAIAATE 370          
BLAST of mRNA_L-digitata_M_contig97026.2.1 vs. uniprot
Match: K2P3N1_9HYPH (Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 n=1 Tax=Nitratireductor indicus C115 TaxID=1231190 RepID=K2P3N1_9HYPH)

HSP 1 Score: 144 bits (364), Expect = 2.520e-38
Identity = 78/158 (49.37%), Postives = 105/158 (66.46%), Query Frame = 0
Query:    1 MTSHNILLGRFAGADGMKTGFVCASGFNIVVSAKQNGRQLVAVVMGALSARDRAERAADLLGAGFAASEAGLPTLATLQPYGEDRTTPADIRAQICTKTSSRNRHDVRDADGRMVFRSPHIQPMTRGPVVVAVGLGGADGPPAANTVQAKAPIPAPWP 158
            M ++N L+GRF GADGMKTG++C+SGFN+  +A +NGR L A+V+GA S   R E+AA+LL  GF A   G PTLA+L PYG++R    D+R QIC+K +   R + RD +GR++  SP+I+PM   P  V + LGGA GP +     A  PIP P P
Sbjct:  199 MPNYNWLIGRFQGADGMKTGYICSSGFNLASTATRNGRTLAAIVLGAPSQVKRGEKAAELLTQGFKAPGFGAPTLASLTPYGQNRNVAIDLRPQICSKEAVAERVEERDDEGRLMVNSPYIRPMDHDPRPVLITLGGATGPESKAPRFANVPIPTPRP 356          
BLAST of mRNA_L-digitata_M_contig97026.2.1 vs. uniprot
Match: UPI0005528C0B (D-alanyl-D-alanine carboxypeptidase n=1 Tax=Chelativorans sp. J32 TaxID=935840 RepID=UPI0005528C0B)

HSP 1 Score: 143 bits (361), Expect = 6.430e-38
Identity = 85/167 (50.90%), Postives = 106/167 (63.47%), Query Frame = 0
Query:    5 NILLGRFAGADGMKTGFVCASGFNIVVSAKQNGRQLVAVVMGALSARDRAERAADLLGAGFAASEAGLPTLATLQPYGEDRTTPADIRAQICTKTSSRNRHDVRDADGRMVFRSPHIQPMTRGPVVVAVGLGGADGPPAANTVQAKAPIPAPWPANAPRPRIVALEQ 171
            N L+GRF GADGMKTG++C+SGFN+V +A +  R L A+V+GA S   RAE AADLL  GF A   G P +A L+ YG      ADIR +IC++ +   R   RD  GR++  SPH+ P+TR P VVAVGLGGA G   A    A  PIP P PA +P    VA+EQ
Sbjct:  202 NFLIGRFDGADGMKTGYICSSGFNLVATATRGRRTLAAIVLGAHSQVQRAEIAADLLTRGFKAPGLGGPNIANLKRYGAATEAVADIRPEICSQEAVAQRMKERDDQGRLILTSPHVHPLTREPQVVAVGLGGAMGEEPAKPRYANVPIPTPRPAYSPP---VAVEQ 365          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig97026.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E1Y085_9HYPH1.120e-6356.93D-alanyl-D-alanine carboxypeptidase n=1 Tax=Phyllo... [more]
A0A2G1QJJ7_9HYPH1.050e-5652.79D-alanyl-D-alanine carboxypeptidase n=2 Tax=Zhenge... [more]
A0A231V391_9HYPH2.010e-4959.01Peptidase_S11 domain-containing protein n=2 Tax=No... [more]
A0A3L7JD93_9HYPH6.560e-4256.13D-alanyl-D-alanine carboxypeptidase n=1 Tax=Notoac... [more]
UPI0013D724C92.180e-4149.70D-alanyl-D-alanine carboxypeptidase n=2 Tax=Chelat... [more]
A0A432V692_9HYPH2.870e-3952.48D-alanyl-D-alanine carboxypeptidase n=1 Tax=Pseuda... [more]
A0A2P7SAP9_9HYPH8.100e-3952.07D-alanyl-D-alanine carboxypeptidase n=1 Tax=Mesorh... [more]
A0A8J7QZS9_9HYPH1.870e-3847.37D-alanyl-D-alanine carboxypeptidase n=1 Tax=Tianwe... [more]
K2P3N1_9HYPH2.520e-3849.37Peptidase S11, D-alanyl-D-alanine carboxypeptidase... [more]
UPI0005528C0B6.430e-3850.90D-alanyl-D-alanine carboxypeptidase n=1 Tax=Chelat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001967Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminalPFAMPF00768Peptidase_S11coord: 5..47
e-value: 1.7E-6
score: 27.7
IPR012338Beta-lactamase/transpeptidase-likeGENE3D3.40.710.10coord: 1..90
e-value: 3.5E-15
score: 57.9
IPR012338Beta-lactamase/transpeptidase-likeSUPERFAMILY56601beta-lactamase/transpeptidase-likecoord: 3..70
NoneNo IPR availablePIRSRPIRSR618044-2PIRSR618044-2coord: 13..66
e-value: 6.8E-10
score: 36.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig97026contigL-digitata_M_contig97026:387..986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig97026.2.1mRNA_L-digitata_M_contig97026.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig97026 387..986 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig97026.2.1 ID=prot_L-digitata_M_contig97026.2.1|Name=mRNA_L-digitata_M_contig97026.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=200bp
MTSHNILLGRFAGADGMKTGFVCASGFNIVVSAKQNGRQLVAVVMGALSA
RDRAERAADLLGAGFAASEAGLPTLATLQPYGEDRTTPADIRAQICTKTS
SRNRHDVRDADGRMVFRSPHIQPMTRGPVVVAVGLGGADGPPAANTVQAK
APIPAPWPANAPRPRIVALEQIAPLTDTVAVIVGTPAPGIPVPTPRPSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001967Peptidase_S11_N
IPR012338Beta-lactam/transpept-like