prot_L-digitata_M_contig96860.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig96860.1.1
Unique Nameprot_L-digitata_M_contig96860.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length118
Homology
BLAST of mRNA_L-digitata_M_contig96860.1.1 vs. uniprot
Match: A0A2E7I3C3_9PROT (Ribonucleoside-diphosphate reductase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I3C3_9PROT)

HSP 1 Score: 214 bits (544), Expect = 6.500e-64
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 0
Query:    1 EGSVQHLDFLTDDEKDVLKTAFEIDQRWVIDLAADRSPFICQSQSLNVFLAADVHKRDLHQIHFQAWKKGVKSLYYCRSKSLQRSESVGALVPVTGDEEADRAAASRNDYEECLACQ 117
            EGSVQHL FLT DEKDV KTAFEIDQRWVIDLAADR+P ICQSQSLN+FL ADVHKRDLHQIHFQAWK+GVKSLYYCRSKSLQRSESV ALVP+T D+EADRAAAS NDYEECLACQ
Sbjct:  530 EGSVQHLGFLTQDEKDVFKTAFEIDQRWVIDLAADRAPEICQSQSLNLFLPADVHKRDLHQIHFQAWKRGVKSLYYCRSKSLQRSESVAALVPLTTDDEADRAAASHNDYEECLACQ 646          
BLAST of mRNA_L-digitata_M_contig96860.1.1 vs. uniprot
Match: A0A2S6QGG7_9PROT (Ribonucleoside-diphosphate reductase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha12_Bin1 TaxID=2013107 RepID=A0A2S6QGG7_9PROT)

HSP 1 Score: 201 bits (510), Expect = 1.140e-58
Identity = 99/119 (83.19%), Postives = 108/119 (90.76%), Query Frame = 0
Query:    1 EGSVQHLDFLTDDEKDVLKTAFEIDQRWVIDLAADRSPFICQSQSLNVFLAADVHKRDLHQIHFQAWKKGVKSLYYCRSKSLQRSESVGAL--VPVTGDEEADRAAASRNDYEECLACQ 117
            EGSVQHLDFL+++EK V KTAFEIDQRWVIDLAADR+  +CQSQSLNVFL ADVHKRDLHQIH+QAWKKGVKSLYYCRSKSLQRSESV A+  V +T DEEADRAAAS NDYEECL+CQ
Sbjct:  573 EGSVQHLDFLSEEEKAVFKTAFEIDQRWVIDLAADRADQVCQSQSLNVFLPADVHKRDLHQIHYQAWKKGVKSLYYCRSKSLQRSESVAAMPMVELTADEEADRAAASHNDYEECLSCQ 691          
BLAST of mRNA_L-digitata_M_contig96860.1.1 vs. uniprot
Match: A0A2E3XF15_9PROT (Ribonucleoside-diphosphate reductase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3XF15_9PROT)

HSP 1 Score: 194 bits (492), Expect = 3.760e-56
Identity = 96/119 (80.67%), Postives = 105/119 (88.24%), Query Frame = 0
Query:    1 EGSVQHLDFLTDDEKDVLKTAFEIDQRWVIDLAADRSPFICQSQSLNVFLAADVHKRDLHQIHFQAWKKGVKSLYYCRSKSLQRSESVGAL--VPVTGDEEADRAAASRNDYEECLACQ 117
            EGSVQ+L+FL+DDEK V KTAFEIDQRWVIDLAADR+  +CQSQSLNVFL ADVHKRDLHQIH+QAWKKGVKSLYYCRSKSLQRSE+V +     +T DEEADR AAS NDYEECLACQ
Sbjct:  559 EGSVQNLEFLSDDEKAVFKTAFEIDQRWVIDLAADRADQVCQSQSLNVFLKADVHKRDLHQIHYQAWKKGVKSLYYCRSKSLQRSENVASTNTAALTNDEEADRLAASHNDYEECLACQ 677          
BLAST of mRNA_L-digitata_M_contig96860.1.1 vs. uniprot
Match: A0A2S6UFA3_9PROT (Ribonucleoside-diphosphate reductase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin1 TaxID=2013074 RepID=A0A2S6UFA3_9PROT)

HSP 1 Score: 184 bits (467), Expect = 1.190e-52
Identity = 94/126 (74.60%), Postives = 104/126 (82.54%), Query Frame = 0
Query:    1 EGSVQHLDFLTDDEKDVLKTAFEIDQRWVIDLAADRSPFICQSQSLNVFLAADVHKRDLHQIHFQAWKKGVKSLYYCRSKSLQRSESVG-----ALVP----VTGDEEADRAAASRNDYEECLACQ 117
            EGSVQHLDFL D EKDV KTAFE+DQRW+IDLAADR+PF+CQSQSLNVFLAAD+HKRDLHQIHFQAWKKGVKSLYYCRSKS+QRSESV      A +P    V G E+    A + NDYEECL+CQ
Sbjct:  535 EGSVQHLDFLDDLEKDVFKTAFELDQRWLIDLAADRTPFVCQSQSLNVFLAADIHKRDLHQIHFQAWKKGVKSLYYCRSKSIQRSESVANTGAVASLPHLGRVNGGEQPGNGA-NANDYEECLSCQ 659          
BLAST of mRNA_L-digitata_M_contig96860.1.1 vs. uniprot
Match: A0A545U3D1_9PROT (Ribonucleoside-diphosphate reductase n=2 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545U3D1_9PROT)

HSP 1 Score: 182 bits (462), Expect = 4.860e-52
Identity = 94/126 (74.60%), Postives = 105/126 (83.33%), Query Frame = 0
Query:    1 EGSVQHLDFLTDDEKDVLKTAFEIDQRWVIDLAADRSPFICQSQSLNVFLAADVHKRDLHQIHFQAWKKGVKSLYYCRSKSLQRSESVG-----ALVPVTGDEEA---DRAAA-SRNDYEECLACQ 117
            EGSVQHLDFL+DDEKDV KTAFE+DQRW+I+ AADR+PFICQ+QSLNVF+ ADVHKRDLHQIHFQAWKKGVKSLYYCRSKS+QR+ES       A VP  G  ++   DRAAA S  DYEECLACQ
Sbjct:  514 EGSVQHLDFLSDDEKDVFKTAFELDQRWLIEHAADRTPFICQAQSLNVFVPADVHKRDLHQIHFQAWKKGVKSLYYCRSKSMQRAESANLNEPVASVPHLGKIDSKGQDRAAAPSSTDYEECLACQ 639          
BLAST of mRNA_L-digitata_M_contig96860.1.1 vs. uniprot
Match: A0A7C7KZI3_9PROT (Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7KZI3_9PROT)

HSP 1 Score: 179 bits (453), Expect = 1.170e-51
Identity = 90/126 (71.43%), Postives = 101/126 (80.16%), Query Frame = 0
Query:    1 EGSVQHLDFLTDDEKDVLKTAFEIDQRWVIDLAADRSPFICQSQSLNVFLAADVHKRDLHQIHFQAWKKGVKSLYYCRSKSLQRSESVG-----ALVP----VTGDEEADRAAASRNDYEECLACQ 117
            EGSVQHLDFL+DDEKDV KTAFE+DQRW+I+ A DRS FICQ+QSLN+FLAADVHKRDLHQIH+QAWKKGVKSLYYCRSKS+QR+ES       A VP    ++  E    AAA   DYEECLACQ
Sbjct:  378 EGSVQHLDFLSDDEKDVFKTAFELDQRWLIEHAGDRSEFICQAQSLNIFLAADVHKRDLHQIHYQAWKKGVKSLYYCRSKSIQRAESAEGAGTTAAVPHLGKISSKETPALAAADTTDYEECLACQ 503          
BLAST of mRNA_L-digitata_M_contig96860.1.1 vs. uniprot
Match: A0A6A7KRP8_9PROT (Ribonucleoside-diphosphate reductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KRP8_9PROT)

HSP 1 Score: 177 bits (448), Expect = 4.630e-50
Identity = 89/129 (68.99%), Postives = 101/129 (78.29%), Query Frame = 0
Query:    1 EGSVQHLDFLTDDEKDVLKTAFEIDQRWVIDLAADRSPFICQSQSLNVFLAADVHKRDLHQIHFQAWKKGVKSLYYCRSKSLQRSESVG--------ALVP----VTGDEEADRAAASRNDYEECLACQ 117
            EGSVQHLDFL+DDEK V KTAFEIDQRW+I+ AADR+PFICQ+QS+NVFL AD+HKRDLHQIH+QAWKKGVKSLYYCRSKS+QR+E V         A VP    V G E+      + NDYEECLACQ
Sbjct:  504 EGSVQHLDFLSDDEKAVYKTAFEIDQRWIIEHAADRAPFICQAQSVNVFLPADIHKRDLHQIHYQAWKKGVKSLYYCRSKSIQRAEVVATKSVNGSHAAVPHLGKVNGGEQPVAGDGNTNDYEECLACQ 632          
BLAST of mRNA_L-digitata_M_contig96860.1.1 vs. uniprot
Match: A0A3D9HWS8_9PROT (Ribonucleoside-diphosphate reductase n=2 Tax=Aestuariispira insulae TaxID=1461337 RepID=A0A3D9HWS8_9PROT)

HSP 1 Score: 176 bits (447), Expect = 7.280e-50
Identity = 88/123 (71.54%), Postives = 97/123 (78.86%), Query Frame = 0
Query:    1 EGSVQHLDFLTDDEKDVLKTAFEIDQRWVIDLAADRSPFICQSQSLNVFLAADVHKRDLHQIHFQAWKKGVKSLYYCRSKSLQRSES------VGALVPVTGDEEADRAAASRNDYEECLACQ 117
            EGSVQHLDFL+DDEKD  KTAFEIDQRW+ID AADR+P ICQ+QSLN+FL ADVHKRDLHQIH+QAWKKGVKSLYYCRSKS+QR+E+          VP  G      A AS  DYEECLACQ
Sbjct:  521 EGSVQHLDFLSDDEKDTFKTAFEIDQRWLIDHAADRAPMICQAQSLNIFLPADVHKRDLHQIHYQAWKKGVKSLYYCRSKSIQRAEAGAEHRPAAVAVPHMGKVNGSEAPAS-TDYEECLACQ 642          
BLAST of mRNA_L-digitata_M_contig96860.1.1 vs. uniprot
Match: UPI001B1BA9FB (Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Pelagibacteraceae bacterium TaxID=2026775 RepID=UPI001B1BA9FB)

HSP 1 Score: 167 bits (424), Expect = 8.480e-50
Identity = 75/119 (63.03%), Postives = 99/119 (83.19%), Query Frame = 0
Query:    1 EGSVQHLDFLTDDEKDVLKTAFEIDQRWVIDLAADRSPFICQSQSLNVFLAADVHKRDLHQIHFQAWKKGVKSLYYCRSKSLQRSESV--GALVPVTGDEEADRAAASRNDYEECLACQ 117
            +GSV HLDFLTD EKDV KTAFE+DQ+W++DL ADR+P+I Q+QS+N+FL ADVHKR+LHQIHFQAWKKG+KSLYYCRSKS+QR+E++  G+   +T +  +   +  + DY+ECL+CQ
Sbjct:  142 QGSVSHLDFLTDLEKDVFKTAFELDQKWIVDLGADRTPYISQAQSINIFLPADVHKRELHQIHFQAWKKGLKSLYYCRSKSIQRAENINSGSSTDITKNVYSQNKSDDKTDYDECLSCQ 260          
BLAST of mRNA_L-digitata_M_contig96860.1.1 vs. uniprot
Match: A0A2E6KJF6_9RICK (Ribonucleoside-diphosphate reductase n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E6KJF6_9RICK)

HSP 1 Score: 175 bits (444), Expect = 1.260e-49
Identity = 83/118 (70.34%), Postives = 98/118 (83.05%), Query Frame = 0
Query:    1 EGSVQHLDFLTDDEKDVLKTAFEIDQRWVIDLAADRSPFICQSQSLNVFLAADVHKRDLHQIHFQAWKKGVKSLYYCRSKSLQRSES-VGALVPVTGDEEADRAAASRNDYEECLACQ 117
            EGSVQHLDFLT DEKDV KTAFE+DQRW+I+ AADR+PFICQ+QSLN+FL ADVHKRDLH +H+ AWKKGVKSLYYCRSKS+QR+ES   A   +  ++ A +A  +  DYEECLACQ
Sbjct:  490 EGSVQHLDFLTQDEKDVFKTAFELDQRWLIEHAADRAPFICQAQSLNIFLPADVHKRDLHNLHYMAWKKGVKSLYYCRSKSIQRAESKTSADKALLAEQMASQAEGNSTDYEECLACQ 607          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig96860.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7I3C3_9PROT6.500e-6488.89Ribonucleoside-diphosphate reductase n=3 Tax=Alpha... [more]
A0A2S6QGG7_9PROT1.140e-5883.19Ribonucleoside-diphosphate reductase n=1 Tax=Alpha... [more]
A0A2E3XF15_9PROT3.760e-5680.67Ribonucleoside-diphosphate reductase n=1 Tax=Rhodo... [more]
A0A2S6UFA3_9PROT1.190e-5274.60Ribonucleoside-diphosphate reductase n=1 Tax=Alpha... [more]
A0A545U3D1_9PROT4.860e-5274.60Ribonucleoside-diphosphate reductase n=2 Tax=Denit... [more]
A0A7C7KZI3_9PROT1.170e-5171.43Ribonucleoside-diphosphate reductase subunit alpha... [more]
A0A6A7KRP8_9PROT4.630e-5068.99Ribonucleoside-diphosphate reductase n=1 Tax=Alpha... [more]
A0A3D9HWS8_9PROT7.280e-5071.54Ribonucleoside-diphosphate reductase n=2 Tax=Aestu... [more]
UPI001B1BA9FB8.480e-5063.03Ribonucleotide-diphosphate reductase subunit alpha... [more]
A0A2E6KJF6_9RICK1.260e-4970.34Ribonucleoside-diphosphate reductase n=1 Tax=Ricke... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.70.20coord: 1..85
e-value: 1.5E-25
score: 91.8
NoneNo IPR availableSUPERFAMILY51998PFL-like glycyl radical enzymescoord: 6..81
IPR000788Ribonucleotide reductase large subunit, C-terminalPFAMPF02867Ribonuc_red_lgCcoord: 2..76
e-value: 8.2E-19
score: 67.5
IPR039718Ribonucleoside-diphosphate reductase large subunitPANTHERPTHR11573RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAINcoord: 1..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig96860contigL-digitata_M_contig96860:1..354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig96860.1.1mRNA_L-digitata_M_contig96860.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig96860 1..354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig96860.1.1 ID=prot_L-digitata_M_contig96860.1.1|Name=mRNA_L-digitata_M_contig96860.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=118bp
EGSVQHLDFLTDDEKDVLKTAFEIDQRWVIDLAADRSPFICQSQSLNVFL
AADVHKRDLHQIHFQAWKKGVKSLYYCRSKSLQRSESVGALVPVTGDEEA
DRAAASRNDYEECLACQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000788RNR_lg_C
IPR039718Rrm1