prot_L-digitata_M_contig96845.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig96845.1.1
Unique Nameprot_L-digitata_M_contig96845.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length86
Homology
BLAST of mRNA_L-digitata_M_contig96845.1.1 vs. uniprot
Match: A0A2E8XU51_9PROT (GIY-YIG domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XU51_9PROT)

HSP 1 Score: 131 bits (329), Expect = 3.220e-38
Identity = 62/77 (80.52%), Postives = 65/77 (84.42%), Query Frame = 0
Query:    4 DAPYFVYVLRNDAGTTYTGIALDVDARLESHNGGNGAKFTRGRGPWTIIHTEGPLPHGDALRREMAIKKDRKLKAAL 80
            D  +FVYVLRNDAG TYTGIA DV ARL +HNGG GAKFTRGRGPW IIHTEGPLPHGDALRRE AIK+DR  KA L
Sbjct:    3 DPEFFVYVLRNDAGATYTGIAKDVAARLAAHNGGTGAKFTRGRGPWDIIHTEGPLPHGDALRRETAIKRDRAFKARL 79          
BLAST of mRNA_L-digitata_M_contig96845.1.1 vs. uniprot
Match: A0A2E7PP30_9PROT (GIY-YIG domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PP30_9PROT)

HSP 1 Score: 121 bits (304), Expect = 2.420e-34
Identity = 58/76 (76.32%), Postives = 63/76 (82.89%), Query Frame = 0
Query:    5 APYFVYVLRNDAGTTYTGIALDVDARLESHNGGNGAKFTRGRGPWTIIHTEGPLPHGDALRREMAIKKDRKLKAAL 80
            A +FVYVL ND GTTYTGIA DV ARL++HN GNGAKFTRGRGPW +IHTEGPL  GDALRRE AIK+DR  KA L
Sbjct:    9 AGFFVYVLCNDTGTTYTGIAKDVMARLDAHNAGNGAKFTRGRGPWALIHTEGPLHKGDALRRERAIKRDRAFKAGL 84          
BLAST of mRNA_L-digitata_M_contig96845.1.1 vs. uniprot
Match: UPI001994684C (GIY-YIG nuclease family protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=UPI001994684C)

HSP 1 Score: 117 bits (292), Expect = 1.340e-32
Identity = 55/76 (72.37%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    7 YFVYVLRNDAGTTYTGIALDVDARLESHNGGNGAKFTRGRGPWTIIHTEGPLPHGDALRREMAIKKDRKLKAALVA 82
            YFVYVL N  G  YTGIA DV ARL  HNGG GA+FTRGRGPW ++H EGPL HGDALRRE AIK+DRK KA L A
Sbjct:    2 YFVYVLTNPHGIAYTGIAKDVTARLVQHNGGTGARFTRGRGPWQVLHVEGPLAHGDALRREAAIKRDRKFKAELKA 77          
BLAST of mRNA_L-digitata_M_contig96845.1.1 vs. uniprot
Match: A0A7C9UWU0_9PROT (GIY-YIG nuclease family protein n=1 Tax=Magnetospirillum aberrantis SpK TaxID=908842 RepID=A0A7C9UWU0_9PROT)

HSP 1 Score: 114 bits (285), Expect = 1.600e-31
Identity = 52/74 (70.27%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    7 YFVYVLRNDAGTTYTGIALDVDARLESHNGGNGAKFTRGRGPWTIIHTEGPLPHGDALRREMAIKKDRKLKAAL 80
            YFVYVL N AG  YTGIA DV +RL +HN G GA+FTRGRGPW +IH+EGP+ HGDALRREMA+K+DR  KA L
Sbjct:    4 YFVYVLLNPAGIAYTGIARDVVSRLAAHNAGKGARFTRGRGPWRVIHSEGPMSHGDALRREMAVKRDRLFKARL 77          
BLAST of mRNA_L-digitata_M_contig96845.1.1 vs. uniprot
Match: A0A7W9ZFY3_NOVIT (Putative endonuclease n=2 Tax=Novispirillum itersonii TaxID=189 RepID=A0A7W9ZFY3_NOVIT)

HSP 1 Score: 114 bits (285), Expect = 2.200e-31
Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 0
Query:    4 DAPYFVYVLRNDAGTTYTGIALDVDARLESHNGGNGAKFTRGRGPWTIIHTEGPLPHGDALRREMAIKKDRKLKAALVAHAL 85
            +A +FVY+L ND G TYTGI+ DVD RL  HN G GA+FTRGRGPW ++H EGPL HGDALRRE+ IKKD + +A L   AL
Sbjct:    8 EAAWFVYILLNDRGITYTGISTDVDRRLCQHNAGTGARFTRGRGPWRLLHCEGPLGHGDALRRELGIKKDARFRAGLKRGAL 89          
BLAST of mRNA_L-digitata_M_contig96845.1.1 vs. uniprot
Match: A0A0U5MGG2_9PROT (Putative Endonuclease n=4 Tax=Magnetospirillum TaxID=13134 RepID=A0A0U5MGG2_9PROT)

HSP 1 Score: 112 bits (281), Expect = 6.530e-31
Identity = 53/74 (71.62%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    7 YFVYVLRNDAGTTYTGIALDVDARLESHNGGNGAKFTRGRGPWTIIHTEGPLPHGDALRREMAIKKDRKLKAAL 80
            +FVYVL N A   YTGIALDVD RL  HN G GAKFTRGRGPW +IH EGPLPHGDALRRE  IK+D+  K AL
Sbjct:    4 WFVYVLLNGADIAYTGIALDVDDRLARHNAGEGAKFTRGRGPWRLIHVEGPLPHGDALRREAEIKRDQAFKRAL 77          
BLAST of mRNA_L-digitata_M_contig96845.1.1 vs. uniprot
Match: UPI00035E5461 (GIY-YIG nuclease family protein n=1 Tax=Novispirillum itersonii TaxID=189 RepID=UPI00035E5461)

HSP 1 Score: 112 bits (280), Expect = 1.170e-30
Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    4 DAPYFVYVLRNDAGTTYTGIALDVDARLESHNGGNGAKFTRGRGPWTIIHTEGPLPHGDALRREMAIKKDRKLKAALVAHA 84
            D  +FVYVL ND G +YTGI+ DV  RL  HN G GA+FTRGRGPW +IH EGPLPHGDALRRE+ IKKD + +++L   A
Sbjct:    8 DTGWFVYVLLNDRGISYTGISTDVARRLTQHNAGAGARFTRGRGPWRLIHQEGPLPHGDALRRELRIKKDARFRSSLKQQA 88          
BLAST of mRNA_L-digitata_M_contig96845.1.1 vs. uniprot
Match: UPI0002FE7801 (GIY-YIG nuclease family protein n=1 Tax=Magnetospirillum magneticum TaxID=84159 RepID=UPI0002FE7801)

HSP 1 Score: 112 bits (280), Expect = 1.310e-30
Identity = 53/74 (71.62%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    7 YFVYVLRNDAGTTYTGIALDVDARLESHNGGNGAKFTRGRGPWTIIHTEGPLPHGDALRREMAIKKDRKLKAAL 80
            +FVYVL N A   YTGIALDV+ RL  HN G GAKFTRGRGPW +IH EGPLPHGDALRRE AIK+D   K AL
Sbjct:    4 WFVYVLLNGADVAYTGIALDVEDRLARHNAGEGAKFTRGRGPWRLIHQEGPLPHGDALRREAAIKRDAAFKRAL 77          
BLAST of mRNA_L-digitata_M_contig96845.1.1 vs. uniprot
Match: A0A364NWW8_9PROT (GIY-YIG domain-containing protein n=1 Tax=Magnetospirillum kuznetsovii TaxID=2053833 RepID=A0A364NWW8_9PROT)

HSP 1 Score: 110 bits (276), Expect = 4.230e-30
Identity = 52/76 (68.42%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    7 YFVYVLRNDAGTTYTGIALDVDARLESHNGGNGAKFTRGRGPWTIIHTEGPLPHGDALRREMAIKKDRKLKAALVA 82
            +FVYVL N AG  YTGI  D++ RL  HN G GAKFTRGRGPW +IH+EGPL HG+ALRRE AIKKDR  KA L A
Sbjct:    3 WFVYVLLNGAGVAYTGITTDLEDRLRRHNRGQGAKFTRGRGPWRLIHSEGPLEHGEALRRESAIKKDRAFKAGLKA 78          
BLAST of mRNA_L-digitata_M_contig96845.1.1 vs. uniprot
Match: A0A6J4FI15_9PROT (GIY-YIG domain-containing protein n=1 Tax=Magnetospirillum sp. SS-4 TaxID=2681465 RepID=A0A6J4FI15_9PROT)

HSP 1 Score: 110 bits (275), Expect = 4.930e-30
Identity = 52/74 (70.27%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    7 YFVYVLRNDAGTTYTGIALDVDARLESHNGGNGAKFTRGRGPWTIIHTEGPLPHGDALRREMAIKKDRKLKAAL 80
            + VYVL N  G  YTGIALDV+ RL  HN G GAKFTRGRGPW ++  EGP+ HGDALRRE AIKKDR+LKAAL
Sbjct:    4 WHVYVLLNAGGIAYTGIALDVEDRLRRHNAGTGAKFTRGRGPWRLVLVEGPMTHGDALRREAAIKKDRRLKAAL 77          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig96845.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8XU51_9PROT3.220e-3880.52GIY-YIG domain-containing protein n=1 Tax=Alphapro... [more]
A0A2E7PP30_9PROT2.420e-3476.32GIY-YIG domain-containing protein n=1 Tax=Rhodospi... [more]
UPI001994684C1.340e-3272.37GIY-YIG nuclease family protein n=2 Tax=Rhodospiri... [more]
A0A7C9UWU0_9PROT1.600e-3170.27GIY-YIG nuclease family protein n=1 Tax=Magnetospi... [more]
A0A7W9ZFY3_NOVIT2.200e-3163.41Putative endonuclease n=2 Tax=Novispirillum iterso... [more]
A0A0U5MGG2_9PROT6.530e-3171.62Putative Endonuclease n=4 Tax=Magnetospirillum Tax... [more]
UPI00035E54611.170e-3062.96GIY-YIG nuclease family protein n=1 Tax=Novispiril... [more]
UPI0002FE78011.310e-3071.62GIY-YIG nuclease family protein n=1 Tax=Magnetospi... [more]
A0A364NWW8_9PROT4.230e-3068.42GIY-YIG domain-containing protein n=1 Tax=Magnetos... [more]
A0A6J4FI15_9PROT4.930e-3070.27GIY-YIG domain-containing protein n=1 Tax=Magnetos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035901GIY-YIG endonuclease superfamilyGENE3D3.40.1440.10coord: 2..84
e-value: 1.6E-22
score: 81.4
IPR035901GIY-YIG endonuclease superfamilySUPERFAMILY82771GIY-YIG endonucleasecoord: 7..74
IPR000305GIY-YIG endonucleasePFAMPF01541GIY-YIGcoord: 7..75
e-value: 4.9E-11
score: 42.7
IPR000305GIY-YIG endonucleasePROSITEPS50164GIY_YIGcoord: 5..80
score: 15.484447
NoneNo IPR availablePANTHERPTHR34477:SF1UPF0213 PROTEIN YHBQcoord: 5..83
NoneNo IPR availablePANTHERPTHR34477UPF0213 PROTEIN YHBQcoord: 5..83
NoneNo IPR availableCDDcd10456GIY-YIG_UPF0213coord: 7..72
e-value: 8.37858E-24
score: 83.6148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig96845contigL-digitata_M_contig96845:710..967 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig96845.1.1mRNA_L-digitata_M_contig96845.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig96845 710..967 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig96845.1.1 ID=prot_L-digitata_M_contig96845.1.1|Name=mRNA_L-digitata_M_contig96845.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=86bp
MASDAPYFVYVLRNDAGTTYTGIALDVDARLESHNGGNGAKFTRGRGPWT
IIHTEGPLPHGDALRREMAIKKDRKLKAALVAHAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035901GIY-YIG_endonuc_sf
IPR000305GIY-YIG_endonuc