prot_L-digitata_M_contig96840.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig96840.1.1
Unique Nameprot_L-digitata_M_contig96840.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length233
Homology
BLAST of mRNA_L-digitata_M_contig96840.1.1 vs. uniprot
Match: A0A2E8XU05_9PROT (2-isopropylmalate synthase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XU05_9PROT)

HSP 1 Score: 400 bits (1028), Expect = 1.280e-135
Identity = 202/233 (86.70%), Postives = 212/233 (90.99%), Query Frame = 0
Query:    1 MTANEKSTETKDSPADPGAENYVRIFDTTLRDGEQSPGCSMNLEEKVRVALALEELGVDIIEAGFPIASNGDFEAVRAVANTVKNSSVAGLARAAHPDIDRAWEAVKGSARPRIHTFLSTSPLHMKFKLQMDPEDVHAAVIDSVSYARNLCEDVEWSPEDGSRTEHDFLCRTVESAIRAGASTINIPDTVGYAVPHEFAALIEMLFNRVPNIDQAVISVHCHNELGLAVANSL 233
            MTA E +T+  +SP D    NYVRIFDTTLRDGEQSPGCSMNLEEKVRVA  LEELGVDIIEAGFPIASNGDFEAVR VANTVK S+VAGLARAAH DI+RAWEAVK +  PRIHTFLSTSPLHMKFKLQM+PE+VH A+IDSVSYARNLC DVEWSPEDGSRTEHDFLCRTVESAIRAGA TINIPDTVGYAVP EFAALIEMLFNRVPNIDQAVISVHCHN+LGLAVANSL
Sbjct:    1 MTATENTTKDTESPVDKSDPNYVRIFDTTLRDGEQSPGCSMNLEEKVRVAQILEELGVDIIEAGFPIASNGDFEAVREVANTVKTSTVAGLARAAHQDIERAWEAVKVAESPRIHTFLSTSPLHMKFKLQMEPEEVHEAIIDSVSYARNLCPDVEWSPEDGSRTEHDFLCRTVESAIRAGAGTINIPDTVGYAVPEEFAALIEMLFNRVPNIDQAVISVHCHNDLGLAVANSL 233          
BLAST of mRNA_L-digitata_M_contig96840.1.1 vs. uniprot
Match: A0A2E3XHE6_9PROT (2-isopropylmalate synthase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3XHE6_9PROT)

HSP 1 Score: 374 bits (961), Expect = 1.750e-125
Identity = 184/213 (86.38%), Postives = 200/213 (93.90%), Query Frame = 0
Query:   21 NYVRIFDTTLRDGEQSPGCSMNLEEKVRVALALEELGVDIIEAGFPIASNGDFEAVRAVANTVKNSSVAGLARAAHPDIDRAWEAVKGSARPRIHTFLSTSPLHMKFKLQMDPEDVHAAVIDSVSYARNLCEDVEWSPEDGSRTEHDFLCRTVESAIRAGASTINIPDTVGYAVPHEFAALIEMLFNRVPNIDQAVISVHCHNELGLAVANSL 233
            NYVRIFDTTLRDGEQSPGCSMNLEEKVRVAL LEE+GVDIIEAGFPIASNGDF++VR VAN VK SSVAGLARA+  DIDRAWEA+KG+ARPRIHTFLSTSPLHM+ KLQMDP++VH A+IDSV++ARNLC DVEWSPEDGSRTEHDFLCR VESAIRAGA+TINIPDTVGYAVP EFA LI MLFNRVPNID+A+ISVHCHN+LGLAVANSL
Sbjct:   21 NYVRIFDTTLRDGEQSPGCSMNLEEKVRVALMLEEMGVDIIEAGFPIASNGDFDSVREVANAVKESSVAGLARASVNDIDRAWEALKGAARPRIHTFLSTSPLHMRVKLQMDPDEVHQAIIDSVTHARNLCPDVEWSPEDGSRTEHDFLCRVVESAIRAGATTINIPDTVGYAVPDEFADLISMLFNRVPNIDKAIISVHCHNDLGLAVANSL 233          
BLAST of mRNA_L-digitata_M_contig96840.1.1 vs. uniprot
Match: A0A848WAJ5_9PROT (2-isopropylmalate synthase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848WAJ5_9PROT)

HSP 1 Score: 374 bits (960), Expect = 2.480e-125
Identity = 192/235 (81.70%), Postives = 211/235 (89.79%), Query Frame = 0
Query:    1 MTANEKSTETKDSPADPGAE--NYVRIFDTTLRDGEQSPGCSMNLEEKVRVALALEELGVDIIEAGFPIASNGDFEAVRAVANTVKNSSVAGLARAAHPDIDRAWEAVKGSARPRIHTFLSTSPLHMKFKLQMDPEDVHAAVIDSVSYARNLCEDVEWSPEDGSRTEHDFLCRTVESAIRAGASTINIPDTVGYAVPHEFAALIEMLFNRVPNIDQAVISVHCHNELGLAVANSL 233
            MTA +  T + ++  D GA+  N VRIFDTTLRDGEQSPGCSMNLEEKVRVAL LEE+GVDIIEAGFPIASNGDFEAVR VAN VK SSVAGLARA+  DIDRAWEA+KG+A+PRIHTFLSTSPLHM+ KLQM+PE+VH A++DSVS+ARNLC DVEWSPEDGSRTEHDFLCR VESAIRAGA+TINIPDTVGYAVP EFA LI MLFNRVPNID+AVISVHCHN+LGLAVANSL
Sbjct:    1 MTATD--TNSINAAPDTGADDPNRVRIFDTTLRDGEQSPGCSMNLEEKVRVALILEEMGVDIIEAGFPIASNGDFEAVREVANAVKTSSVAGLARASSKDIDRAWEALKGAAQPRIHTFLSTSPLHMRVKLQMEPEEVHQAIVDSVSHARNLCPDVEWSPEDGSRTEHDFLCRVVESAIRAGATTINIPDTVGYAVPGEFAELITMLFNRVPNIDKAVISVHCHNDLGLAVANSL 233          
BLAST of mRNA_L-digitata_M_contig96840.1.1 vs. uniprot
Match: A0A2S6QG10_9PROT (2-isopropylmalate synthase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha12_Bin1 TaxID=2013107 RepID=A0A2S6QG10_9PROT)

HSP 1 Score: 365 bits (936), Expect = 1.050e-121
Identity = 178/213 (83.57%), Postives = 198/213 (92.96%), Query Frame = 0
Query:   21 NYVRIFDTTLRDGEQSPGCSMNLEEKVRVALALEELGVDIIEAGFPIASNGDFEAVRAVANTVKNSSVAGLARAAHPDIDRAWEAVKGSARPRIHTFLSTSPLHMKFKLQMDPEDVHAAVIDSVSYARNLCEDVEWSPEDGSRTEHDFLCRTVESAIRAGASTINIPDTVGYAVPHEFAALIEMLFNRVPNIDQAVISVHCHNELGLAVANSL 233
            ++VRIFDTTLRDGEQSPGCSMNLEEKVRVAL LEE+GVDIIEAGFPIASNGDF+AVR VA  +K SSVAGLARA+  DIDRAWEA+K +A+PRIHTFLSTSPLHM+ KLQM+PE+VH  +IDSV++ARNLC DVEWSPEDGSRTEHDFLCR VESAIRAGA+TINIPDTVGYAVP EF+ALI MLFNRVPNID+AV+SVHCHN+LGLAVANSL
Sbjct:   21 DHVRIFDTTLRDGEQSPGCSMNLEEKVRVALILEEMGVDIIEAGFPIASNGDFDAVREVAKALKTSSVAGLARASKVDIDRAWEALKDAAKPRIHTFLSTSPLHMRVKLQMEPEEVHQTIIDSVTHARNLCPDVEWSPEDGSRTEHDFLCRVVESAIRAGANTINIPDTVGYAVPEEFSALISMLFNRVPNIDKAVVSVHCHNDLGLAVANSL 233          
BLAST of mRNA_L-digitata_M_contig96840.1.1 vs. uniprot
Match: A0A1Y6B994_9HYPH (2-isopropylmalate synthase n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6B994_9HYPH)

HSP 1 Score: 359 bits (921), Expect = 1.570e-119
Identity = 180/215 (83.72%), Postives = 191/215 (88.84%), Query Frame = 0
Query:   19 AENYVRIFDTTLRDGEQSPGCSMNLEEKVRVALALEELGVDIIEAGFPIASNGDFEAVRAVANTVKNSSVAGLARAAHPDIDRAWEAVKGSARPRIHTFLSTSPLHMKFKLQMDPEDVHAAVIDSVSYARNLCEDVEWSPEDGSRTEHDFLCRTVESAIRAGASTINIPDTVGYAVPHEFAALIEMLFNRVPNIDQAVISVHCHNELGLAVANSL 233
            AEN+V+IFDTTLRDGEQSPGCSMNLEEK++VA  LE +GVDIIEAGFPIASNGDFEAVR VA  VKNS VAGLARA   DIDRAWEA+KG+   RIHTFLSTSPLHMKFKLQM+PE VH AVIDSVSYAR LCEDVEWSPEDG+RTEHDFLCR VESAI+AGA TINIPDTVGY VP EF ALI ML NRVPNIDQA ISVHCHN+LGLAVANSL
Sbjct:   12 AENHVKIFDTTLRDGEQSPGCSMNLEEKIQVAEMLEAMGVDIIEAGFPIASNGDFEAVREVAARVKNSRVAGLARATQKDIDRAWEALKGAEAARIHTFLSTSPLHMKFKLQMEPEAVHQAVIDSVSYARKLCEDVEWSPEDGTRTEHDFLCRCVESAIKAGARTINIPDTVGYTVPEEFHALIAMLMNRVPNIDQATISVHCHNDLGLAVANSL 226          
BLAST of mRNA_L-digitata_M_contig96840.1.1 vs. uniprot
Match: A0A5J6MI39_9PROT (2-isopropylmalate synthase n=2 Tax=Hypericibacter TaxID=2705399 RepID=A0A5J6MI39_9PROT)

HSP 1 Score: 350 bits (898), Expect = 3.790e-116
Identity = 172/213 (80.75%), Postives = 192/213 (90.14%), Query Frame = 0
Query:   21 NYVRIFDTTLRDGEQSPGCSMNLEEKVRVALALEELGVDIIEAGFPIASNGDFEAVRAVANTVKNSSVAGLARAAHPDIDRAWEAVKGSARPRIHTFLSTSPLHMKFKLQMDPEDVHAAVIDSVSYARNLCEDVEWSPEDGSRTEHDFLCRTVESAIRAGASTINIPDTVGYAVPHEFAALIEMLFNRVPNIDQAVISVHCHNELGLAVANSL 233
            N V IFDTT+RDGEQSPG SMNL+EK R+A  LEE+GVD+IEAGFPIASNGDFEAVR VA  +K SSVAGLARA+  DIDRAWEA++G+ RPRIH+FLSTSPLHMKFKLQM+PE VH AVIDSV+YAR+LCEDVEWS ED SRT+HDFLCR VE+AI+ GASTINIPDTVGYAVP EFAALI MLFNRVPNID+A+ISVHCHN+LGLAVANSL
Sbjct:    8 NRVVIFDTTMRDGEQSPGASMNLDEKKRIAAVLEEMGVDVIEAGFPIASNGDFEAVREVAKLLKTSSVAGLARASKKDIDRAWEALQGAVRPRIHSFLSTSPLHMKFKLQMEPEAVHQAVIDSVTYARSLCEDVEWSAEDASRTDHDFLCRCVEAAIKCGASTINIPDTVGYAVPDEFAALIRMLFNRVPNIDKAIISVHCHNDLGLAVANSL 220          
BLAST of mRNA_L-digitata_M_contig96840.1.1 vs. uniprot
Match: A0A523F613_9PROT (2-isopropylmalate synthase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523F613_9PROT)

HSP 1 Score: 349 bits (896), Expect = 7.610e-116
Identity = 174/215 (80.93%), Postives = 195/215 (90.70%), Query Frame = 0
Query:   19 AENYVRIFDTTLRDGEQSPGCSMNLEEKVRVALALEELGVDIIEAGFPIASNGDFEAVRAVANTVKNSSVAGLARAAHPDIDRAWEAVKGSARPRIHTFLSTSPLHMKFKLQMDPEDVHAAVIDSVSYARNLCEDVEWSPEDGSRTEHDFLCRTVESAIRAGASTINIPDTVGYAVPHEFAALIEMLFNRVPNIDQAVISVHCHNELGLAVANSL 233
            A++ V IFDTTLRDGEQSPG SMNLEEK+++A  LEE+ VD+IEAGFPIASNGDFEAVR VA TVK S+V GLARA+  DIDRAWEA++ +ARPRIHTFLSTS LHMK+KLQM+PE VH AVIDSVS+ARNLC+DVEWSPEDGSRT+HDFLCR VESAI+AGA TINIPDTVGYAVP EFAALI MLF+RVPNID+AVISVHCHN+LGLAVANSL
Sbjct:    6 AKDSVVIFDTTLRDGEQSPGASMNLEEKLKIAEILEEMRVDVIEAGFPIASNGDFEAVREVARTVKESTVCGLARASRKDIDRAWEALQHAARPRIHTFLSTSALHMKYKLQMEPEAVHQAVIDSVSHARNLCDDVEWSPEDGSRTDHDFLCRCVESAIKAGAGTINIPDTVGYAVPQEFAALIAMLFDRVPNIDKAVISVHCHNDLGLAVANSL 220          
BLAST of mRNA_L-digitata_M_contig96840.1.1 vs. uniprot
Match: A0A3M0XN59_9PROT (2-isopropylmalate synthase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0XN59_9PROT)

HSP 1 Score: 349 bits (895), Expect = 9.840e-116
Identity = 172/211 (81.52%), Postives = 192/211 (91.00%), Query Frame = 0
Query:   23 VRIFDTTLRDGEQSPGCSMNLEEKVRVALALEELGVDIIEAGFPIASNGDFEAVRAVANTVKNSSVAGLARAAHPDIDRAWEAVKGSARPRIHTFLSTSPLHMKFKLQMDPEDVHAAVIDSVSYARNLCEDVEWSPEDGSRTEHDFLCRTVESAIRAGASTINIPDTVGYAVPHEFAALIEMLFNRVPNIDQAVISVHCHNELGLAVANSL 233
            VRIFDTTLRDGEQSPGCSMNL+EK++VA  LEE+GVDIIEAGFPIASNGDFEAV  +A  V+N++VAGLARA   DIDRAWEA+KG+AR RIHTF+STSPLHMK+KLQM+PE VH AVIDSVS+ARNLC+DVEWSPEDG+RT+ DFLCR VESAI+AGA TINIPDTVGY VPHEF ALI ML NRVPNID+AVISVHCHN+LGLAVANSL
Sbjct:    6 VRIFDTTLRDGEQSPGCSMNLDEKLQVAAVLEEMGVDIIEAGFPIASNGDFEAVCEIAARVRNATVAGLARATRKDIDRAWEALKGAARARIHTFISTSPLHMKYKLQMEPEAVHQAVIDSVSHARNLCDDVEWSPEDGTRTDPDFLCRCVESAIKAGAGTINIPDTVGYTVPHEFHALITMLRNRVPNIDKAVISVHCHNDLGLAVANSL 216          
BLAST of mRNA_L-digitata_M_contig96840.1.1 vs. uniprot
Match: UPI0019EC12B4 (2-isopropylmalate synthase n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019EC12B4)

HSP 1 Score: 349 bits (896), Expect = 1.030e-115
Identity = 168/213 (78.87%), Postives = 191/213 (89.67%), Query Frame = 0
Query:   21 NYVRIFDTTLRDGEQSPGCSMNLEEKVRVALALEELGVDIIEAGFPIASNGDFEAVRAVANTVKNSSVAGLARAAHPDIDRAWEAVKGSARPRIHTFLSTSPLHMKFKLQMDPEDVHAAVIDSVSYARNLCEDVEWSPEDGSRTEHDFLCRTVESAIRAGASTINIPDTVGYAVPHEFAALIEMLFNRVPNIDQAVISVHCHNELGLAVANSL 233
            N++RIFDTTLRDGEQSPGCSMNLEEK+RVA ALE +GVDIIEAGFPIASNGDFEAV  +A TVKNS+VAGL+RA   DIDRAWEA+K +ARPRIH F+STSPLHM++KLQM+P  VH  ++DS+SYARNLC+DVEWSPEDG+RTEHDFLCR VESAI+AGASTIN+PDTVGY  P EF  LI ML NRVPNID+A+ISVHCHN+LGLAVANSL
Sbjct:   18 NHIRIFDTTLRDGEQSPGCSMNLEEKLRVARALEAMGVDIIEAGFPIASNGDFEAVSEIARTVKNSTVAGLSRANKKDIDRAWEALKHAARPRIHNFISTSPLHMEYKLQMEPGAVHDLMVDSISYARNLCDDVEWSPEDGTRTEHDFLCRCVESAIKAGASTINVPDTVGYTTPEEFHELIAMLMNRVPNIDKAIISVHCHNDLGLAVANSL 230          
BLAST of mRNA_L-digitata_M_contig96840.1.1 vs. uniprot
Match: A0A1G7V2H8_9PROT (2-isopropylmalate synthase n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7V2H8_9PROT)

HSP 1 Score: 348 bits (892), Expect = 3.440e-115
Identity = 174/222 (78.38%), Postives = 192/222 (86.49%), Query Frame = 0
Query:   12 DSPADPGAENYVRIFDTTLRDGEQSPGCSMNLEEKVRVALALEELGVDIIEAGFPIASNGDFEAVRAVANTVKNSSVAGLARAAHPDIDRAWEAVKGSARPRIHTFLSTSPLHMKFKLQMDPEDVHAAVIDSVSYARNLCEDVEWSPEDGSRTEHDFLCRTVESAIRAGASTINIPDTVGYAVPHEFAALIEMLFNRVPNIDQAVISVHCHNELGLAVANSL 233
            DS    G    V IFDTT+RDGEQSPGCSMNL+EKVR+A ALEELGVD++EAGFPIASNGDFEAVRAVA  V+ + V GLARAA PDI+RA EA++ + RPRIHTF+STSPLHMK+KLQMDPE VH AVIDSV +ARN  +DVEWSPEDG+RTEHDFLCR VESAIRAGA+TINIPDTVGY VP EF ALIEML NRVPNIDQAVISVHCHN+LGL VANSL
Sbjct:    3 DSTTPAGDAQRVIIFDTTMRDGEQSPGCSMNLDEKVRIAKALEELGVDVMEAGFPIASNGDFEAVRAVAQVVEKAGVCGLARAAKPDIERAAEALRPARRPRIHTFISTSPLHMKYKLQMDPETVHQAVIDSVGWARNFTDDVEWSPEDGTRTEHDFLCRCVESAIRAGATTINIPDTVGYTVPDEFRALIEMLMNRVPNIDQAVISVHCHNDLGLGVANSL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig96840.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8XU05_9PROT1.280e-13586.702-isopropylmalate synthase n=2 Tax=Alphaproteobact... [more]
A0A2E3XHE6_9PROT1.750e-12586.382-isopropylmalate synthase n=1 Tax=Rhodospirillace... [more]
A0A848WAJ5_9PROT2.480e-12581.702-isopropylmalate synthase n=1 Tax=Alphaproteobact... [more]
A0A2S6QG10_9PROT1.050e-12183.572-isopropylmalate synthase n=1 Tax=Alphaproteobact... [more]
A0A1Y6B994_9HYPH1.570e-11983.722-isopropylmalate synthase n=1 Tax=Tistlia consote... [more]
A0A5J6MI39_9PROT3.790e-11680.752-isopropylmalate synthase n=2 Tax=Hypericibacter ... [more]
A0A523F613_9PROT7.610e-11680.932-isopropylmalate synthase n=1 Tax=Alphaproteobact... [more]
A0A3M0XN59_9PROT9.840e-11681.522-isopropylmalate synthase n=1 Tax=Alphaproteobact... [more]
UPI0019EC12B41.030e-11578.872-isopropylmalate synthase n=2 Tax=Proteobacteria ... [more]
A0A1G7V2H8_9PROT3.440e-11578.382-isopropylmalate synthase n=1 Tax=Roseospirillum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 5..233
e-value: 4.6E-76
score: 258.1
IPR000891Pyruvate carboxyltransferasePFAMPF00682HMGL-likecoord: 23..233
e-value: 1.6E-71
score: 240.9
IPR000891Pyruvate carboxyltransferasePROSITEPS50991PYR_CTcoord: 23..233
score: 31.928284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR10277HOMOCITRATE SYNTHASE-RELATEDcoord: 20..233
NoneNo IPR availablePANTHERPTHR10277:SF92-ISOPROPYLMALATE SYNTHASE 1, CHLOROPLASTICcoord: 20..233
NoneNo IPR availableCDDcd07940DRE_TIM_IPMScoord: 25..233
e-value: 4.62145E-131
score: 368.314
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 20..233
IPR002034Alpha-isopropylmalate/homocitrate synthase, conserved sitePROSITEPS00815AIPM_HOMOCIT_SYNTH_1coord: 30..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig96840contigL-digitata_M_contig96840:4..702 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig96840.1.1mRNA_L-digitata_M_contig96840.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig96840 4..702 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig96840.1.1 ID=prot_L-digitata_M_contig96840.1.1|Name=mRNA_L-digitata_M_contig96840.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=233bp
MTANEKSTETKDSPADPGAENYVRIFDTTLRDGEQSPGCSMNLEEKVRVA
LALEELGVDIIEAGFPIASNGDFEAVRAVANTVKNSSVAGLARAAHPDID
RAWEAVKGSARPRIHTFLSTSPLHMKFKLQMDPEDVHAAVIDSVSYARNL
CEDVEWSPEDGSRTEHDFLCRTVESAIRAGASTINIPDTVGYAVPHEFAA
LIEMLFNRVPNIDQAVISVHCHNELGLAVANSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR000891PYR_CT
IPR002034AIPM/Hcit_synth_CS