prot_L-digitata_M_contig9684.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9684.1.1
Unique Nameprot_L-digitata_M_contig9684.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length141
Homology
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BLAST of mRNA_L-digitata_M_contig9684.1.1 vs. uniprot
Match: D8LC15_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC15_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 4.140e-55
Identity = 86/140 (61.43%), Postives = 111/140 (79.29%), Query Frame = 0 
Query:    1 ERCVQVKFLRDPNHAFVAQGIVALVFGTLHLLKYDEFIAKLAEPLSNLIGVKSGAAAHGHPYIKLVGAYLVGVLVSDVVAYKSTSAGFKRGKVWHEMGSGIALSLVCLKELFSSDAPADMVPHCLAAVVFAAWYTFLSQN 140
            ER    KF+ +PN+AFVAQG+ AL+FG LHL KYD+F+ KLA+PL +L G++ G    G PY+KL+GAYLVGV  SDV+AYKS SAGFKRGK+WHEMGS IA+S +C+ ++FS + PAD+VPH +AA VFA WY++LSQ 
Sbjct:  137 ERTALKKFIGNPNNAFVAQGVTALLFGGLHLAKYDQFVGKLAQPLCSLFGLEWGPGTVG-PYMKLIGAYLVGVFFSDVLAYKSNSAGFKRGKIWHEMGSCIAISTLCITQMFS-ETPADVVPHAIAAFVFAGWYSYLSQQ 274
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9684.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC15_ECTSI4.140e-5561.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9684contigL-digitata_M_contig9684:91..2172 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9684.1.1mRNA_L-digitata_M_contig9684.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9684 91..2172 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9684.1.1 ID=prot_L-digitata_M_contig9684.1.1|Name=mRNA_L-digitata_M_contig9684.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=141bp
ERCVQVKFLRDPNHAFVAQGIVALVFGTLHLLKYDEFIAKLAEPLSNLIG
VKSGAAAHGHPYIKLVGAYLVGVLVSDVVAYKSTSAGFKRGKVWHEMGSG
IALSLVCLKELFSSDAPADMVPHCLAAVVFAAWYTFLSQN*
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