prot_L-digitata_M_contig96830.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig96830.1.1
Unique Nameprot_L-digitata_M_contig96830.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length133
Homology
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BLAST of mRNA_L-digitata_M_contig96830.1.1 vs. uniprot
Match: UPI00141ACAF5 (hypothetical protein n=1 Tax=Xanthomonas arboricola TaxID=56448 RepID=UPI00141ACAF5)

HSP 1 Score: 55.8 bits (133), Expect = 2.180e-6
Identity = 39/112 (34.82%), Postives = 56/112 (50.00%), Query Frame = 0 
Query:    7 HILIAGFDEHGRQMWEMNGLATDAKTGSRRTFGAPFDRGDRIKFWIDTPTFFWANSQNPVRLFSGNPKEISKLRLHAMEAGAKINRADLHYRAWLNPQNSNSVAATLLKAMG 118
            H  IA  D +GR + E+NGLAT A  G  +  G  F   D ++ + +   +++  S +   L+ G+ + +  L   A  A   IN  DL Y       NSNSVA TL+ AMG
Sbjct:   25 HNYIAMMDSNGRIVGEINGLATGAN-GEIKPIG--FLPSDTLRTYEEAGAYYYNPSHSQAVLYEGSLESVESLWGQARAAADSINSWDLSYPTLGLGPNSNSVANTLIDAMG 133
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BLAST of mRNA_L-digitata_M_contig96830.1.1 vs. uniprot
Match: A0A261SGB4_9BORD (Uncharacterized protein n=2 Tax=Bordetella genomosp. 1 TaxID=1395607 RepID=A0A261SGB4_9BORD)

HSP 1 Score: 51.2 bits (121), Expect = 3.410e-5
Identity = 39/118 (33.05%), Postives = 58/118 (49.15%), Query Frame = 0 
Query:    1 VQTIHRHILIAGFDEHGRQMWEMNGLATDAKTGSRRTFGAPFDRGDRIKFWIDTPTFFWANSQNPVRLFSGNPKEISKLRLHAMEAGAKINRADLHYRAWLNPQNSNSVAATLLKAMG 118
            V  +  H LIA  D  GR + E NGLAT ++ G  +  G  +   DR+K +  +    +   Q  + L +G+ +E+S+       A + +N   L Y       NSNSVA TL+ AMG
Sbjct:   31 VAMLFGHDLIALLDADGRLLREANGLAT-SRQGRIKPIG--YLPSDRLKVYEFSAPALYRAQQRQLTLCTGSWEEVSRHWRVLRAAASALNARHLRYPMLGFGPNSNSVATTLIAAMG 145
[Close]
BLAST of mRNA_L-digitata_M_contig96830.1.1 vs. uniprot
Match: J3I2R5_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 TaxID=1144344 RepID=J3I2R5_9BRAD)

HSP 1 Score: 52.0 bits (123), Expect = 4.110e-5
Identity = 37/118 (31.36%), Postives = 56/118 (47.46%), Query Frame = 0 
Query:    7 HILIAGFDEHGRQMWEMNGLATDAKTGSRRTFGAPFDRGDRIKFWIDTPTFFWANSQNPVRLFSGNPKEISKLRLHAMEAGAKINRADLHYRAWLNPQNSNSVAATLLKAMGKDPQEI 124
            H  +   D +G+ + E++GLAT A    +     P    D ++ + D    F+        L SG+  EI K+         KIN   +HY +    QNSNSVA+TL+ AMG+  Q +
Sbjct:   22 HNFLVLIDPNGKAIGELHGLATGADGRPKPIGHLP---SDELRGYADR--HFYQPDFAQAELASGDQAEIMKMWNAGRAVLDKINARSIHYPSMGLGQNSNSVASTLIAAMGQSEQAV 134
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig96830.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI00141ACAF52.180e-634.82hypothetical protein n=1 Tax=Xanthomonas arboricol... [more]
A0A261SGB4_9BORD3.410e-533.05Uncharacterized protein n=2 Tax=Bordetella genomos... [more]
J3I2R5_9BRAD4.110e-531.36Uncharacterized protein n=1 Tax=Bradyrhizobium sp.... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig96830contigL-digitata_M_contig96830:580..978 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig96830.1.1mRNA_L-digitata_M_contig96830.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig96830 580..978 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig96830.1.1 ID=prot_L-digitata_M_contig96830.1.1|Name=mRNA_L-digitata_M_contig96830.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=133bp
VQTIHRHILIAGFDEHGRQMWEMNGLATDAKTGSRRTFGAPFDRGDRIKF
WIDTPTFFWANSQNPVRLFSGNPKEISKLRLHAMEAGAKINRADLHYRAW
LNPQNSNSVAATLLKAMGKDPQEILLGMRQLYE
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