prot_L-digitata_M_contig102387.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig102387.1.1
Unique Nameprot_L-digitata_M_contig102387.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length83
Homology
BLAST of mRNA_L-digitata_M_contig102387.1.1 vs. uniprot
Match: D7FNJ6_ECTSI (Lon protease homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNJ6_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 3.760e-35
Identity = 69/82 (84.15%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    2 QIAYSVSRECLGRFRPDCAMFFERAAEVHMHVPEGATPKDGPSAGVTMVTALLSLAMRTPVREDLAMTGELSLTGKVCWGGG 83
            QIAYSV+RECLG+ RP  A+FFE+AAEVHMHVPEGATPKDGPSAGVTMVTALLSLA  T VREDLAMTGELSLTGKV   GG
Sbjct:  927 QIAYSVARECLGKLRPASALFFEKAAEVHMHVPEGATPKDGPSAGVTMVTALLSLATGTSVREDLAMTGELSLTGKVLPVGG 1008          
BLAST of mRNA_L-digitata_M_contig102387.1.1 vs. uniprot
Match: A0A7R9VGS6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VGS6_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.160e-25
Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    2 QIAYSVSRECLGRFRPDCAMFFERAAEVHMHVPEGATPKDGPSAGVTMVTALLSLAMRTPVREDLAMTGELSLTGKVCWGGG 83
            QIAY+V+R  L + +PD   F E   ++HMHVPEGATPKDGPSAG+TMVTA+LSLA+  PV+ DLAMTGE+SLTGKV   GG
Sbjct:  154 QIAYTVARARLAQVQPDNIYFDEY--DIHMHVPEGATPKDGPSAGITMVTAMLSLALDKPVKNDLAMTGEISLTGKVLPVGG 233          
BLAST of mRNA_L-digitata_M_contig102387.1.1 vs. uniprot
Match: W4F9P1_9STRA (Lon proteolytic domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4F9P1_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.080e-24
Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    2 QIAYSVSRECLGRFRPDCAMFFERAAEVHMHVPEGATPKDGPSAGVTMVTALLSLAMRTPVREDLAMTGELSLTGKVCWGGG 83
            +IA++ +R  L +  PD A FFE  A++H+HVPEGATPKDGPSAG TMVTALLSLA+  PV+ DLAMTGELSLTGKV   GG
Sbjct:   54 KIAHTFARHKLEQLEPDNA-FFE--ADLHLHVPEGATPKDGPSAGCTMVTALLSLALDKPVKSDLAMTGELSLTGKVLPVGG 132          
BLAST of mRNA_L-digitata_M_contig102387.1.1 vs. uniprot
Match: B8C600_THAPS (Lon protease homolog (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C600_THAPS)

HSP 1 Score: 103 bits (258), Expect = 4.410e-24
Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 0
Query:    2 QIAYSVSRECLGRFRPDCAMFFERAAEVHMHVPEGATPKDGPSAGVTMVTALLSLAMRTPVREDLAMTGELSLTGKVCWGGG 83
            QIAY+V+R  +    PD + F +   ++HMHVPEGATPKDGPSAGVTMVTA+LSLA+  P++ DLAMTGE+SLTGKV   GG
Sbjct:  701 QIAYTVARARMAEIAPDNSFFDD--TDIHMHVPEGATPKDGPSAGVTMVTAMLSLALDRPIKSDLAMTGEISLTGKVLAVGG 780          
BLAST of mRNA_L-digitata_M_contig102387.1.1 vs. uniprot
Match: A0A7S2RJP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RJP1_9STRA)

HSP 1 Score: 100 bits (250), Expect = 4.680e-24
Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = 0
Query:    2 QIAYSVSRECLGRFRPDCAMFFERAAEVHMHVPEGATPKDGPSAGVTMVTALLSLAMRTPVREDLAMTGELSLTGKV 78
            QIAY+V+R  L   +P  + F +   ++HMHVPEGATPKDGPSAG+TM TA+LSLAM  P+R DLAMTGE+SLTGKV
Sbjct:  160 QIAYTVARAKLSCTKPSSSYFDD--FDIHMHVPEGATPKDGPSAGITMTTAMLSLAMDKPIRNDLAMTGEISLTGKV 234          
BLAST of mRNA_L-digitata_M_contig102387.1.1 vs. uniprot
Match: A0A7S4J9P4_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4J9P4_9EUKA)

HSP 1 Score: 97.8 bits (242), Expect = 6.720e-24
Identity = 53/76 (69.74%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    3 IAYSVSRECLGRFRPDCAMFFERAAEVHMHVPEGATPKDGPSAGVTMVTALLSLAMRTPVREDLAMTGELSLTGKV 78
            IA++ +R  L   +PD   + ERA  +H+HVPEGATPKDGPSAGVTMVTALLSLA  TP R DLAMTGELSLTGKV
Sbjct:   32 IAHTYARTYLNALQPDNT-YLERAP-LHLHVPEGATPKDGPSAGVTMVTALLSLATATPPRADLAMTGELSLTGKV 105          
BLAST of mRNA_L-digitata_M_contig102387.1.1 vs. uniprot
Match: A0A7D9LSU3_PARCT (Lon protease homolog, mitochondrial-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LSU3_PARCT)

HSP 1 Score: 97.1 bits (240), Expect = 1.680e-23
Identity = 50/82 (60.98%), Postives = 67/82 (81.71%), Query Frame = 0
Query:    2 QIAYSVSRECLGRFRPDCAMFFERAAEVHMHVPEGATPKDGPSAGVTMVTALLSLAMRTPVREDLAMTGELSLTGKVCWGGG 83
            +I+Y+ S+  L +  PD   FF++A+ +H+HVPEGATPKDGPSAG T++TALLSLA+ TPVR+++AMTGE+SLTGKV   GG
Sbjct:   50 KISYTFSKGFLAKLYPD-NKFFQQAS-MHLHVPEGATPKDGPSAGCTIITALLSLALDTPVRQNIAMTGEVSLTGKVLPVGG 129          
BLAST of mRNA_L-digitata_M_contig102387.1.1 vs. uniprot
Match: E9GU95_DAPPU (Lon protease homolog, mitochondrial n=8 Tax=Daphnia TaxID=6668 RepID=E9GU95_DAPPU)

HSP 1 Score: 102 bits (253), Expect = 2.090e-23
Identity = 52/83 (62.65%), Postives = 66/83 (79.52%), Query Frame = 0
Query:    1 LQIAYSVSRECLGRFRPDCAMFFERAAEVHMHVPEGATPKDGPSAGVTMVTALLSLAMRTPVREDLAMTGELSLTGKVCWGGG 83
            ++IAY+V++    + RPD + F E  A +H+HVPEGATPKDGPSAG T+VTALLSLAM  PVR+++AMTGE+SLTGKV   GG
Sbjct:  721 VRIAYTVAKMFSAKIRPDDSFFSE--AHIHVHVPEGATPKDGPSAGCTIVTALLSLAMNEPVRQNIAMTGEVSLTGKVLPVGG 801          
BLAST of mRNA_L-digitata_M_contig102387.1.1 vs. uniprot
Match: A0A7S3PZD5_9STRA (Lon protease homolog n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZD5_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.100e-23
Identity = 51/77 (66.23%), Postives = 60/77 (77.92%), Query Frame = 0
Query:    2 QIAYSVSRECLGRFRPDCAMFFERAAEVHMHVPEGATPKDGPSAGVTMVTALLSLAMRTPVREDLAMTGELSLTGKV 78
            +IAY+VSR  L    P  + F E   ++HMHVPEGATPKDGPSAGVTM TA+LSLA+  P+R DLAMTGE+SLTGKV
Sbjct:  825 EIAYTVSRAQLADIDPSSSFFDEN--DIHMHVPEGATPKDGPSAGVTMTTAMLSLALGKPIRNDLAMTGEISLTGKV 899          
BLAST of mRNA_L-digitata_M_contig102387.1.1 vs. uniprot
Match: A0A7S1CBW2_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBW2_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.390e-23
Identity = 55/77 (71.43%), Postives = 61/77 (79.22%), Query Frame = 0
Query:    2 QIAYSVSRECLGRFRPDCAMFFERAAEVHMHVPEGATPKDGPSAGVTMVTALLSLAMRTPVREDLAMTGELSLTGKV 78
            QIA S +R  L    P+   FFERAA +H+HVPEGATPKDGPSAGVTMVTALLSLA   PV+ DLAMTGELSLTG+V
Sbjct:  194 QIALSFARHKLRALEPEND-FFERAA-LHLHVPEGATPKDGPSAGVTMVTALLSLATNKPVKPDLAMTGELSLTGRV 268          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102387.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNJ6_ECTSI3.760e-3584.15Lon protease homolog n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7R9VGS6_9STRA2.160e-2565.85Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
W4F9P1_9STRA1.080e-2467.07Lon proteolytic domain-containing protein n=2 Tax=... [more]
B8C600_THAPS4.410e-2463.41Lon protease homolog (Fragment) n=1 Tax=Thalassios... [more]
A0A7S2RJP1_9STRA4.680e-2464.94Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S4J9P4_9EUKA6.720e-2469.74Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7D9LSU3_PARCT1.680e-2360.98Lon protease homolog, mitochondrial-like n=1 Tax=P... [more]
E9GU95_DAPPU2.090e-2362.65Lon protease homolog, mitochondrial n=8 Tax=Daphni... [more]
A0A7S3PZD5_9STRA2.100e-2366.23Lon protease homolog n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1CBW2_9STRA2.390e-2371.43Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00830ENDOLAPTASEcoord: 38..57
score: 68.46
coord: 68..83
score: 47.95
NoneNo IPR availablePANTHERPTHR43718:SF2LON PROTEASE HOMOLOG, MITOCHONDRIALcoord: 2..80
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 1..83
e-value: 2.1E-24
score: 88.3
IPR008269Peptidase S16, Lon proteolytic domainPFAMPF05362Lon_Ccoord: 2..82
e-value: 1.9E-26
score: 92.9
IPR008269Peptidase S16, Lon proteolytic domainPROSITEPS51786LON_PROTEOLYTICcoord: 1..83
score: 31.523148
IPR027065Lon proteasePANTHERPTHR43718LON PROTEASEcoord: 2..80
IPR008268Peptidase S16, active sitePROSITEPS01046LON_SERcoord: 41..49
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 3..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig102387contigL-digitata_M_contig102387:613..861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig102387.1.1mRNA_L-digitata_M_contig102387.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig102387 613..861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig102387.1.1 ID=prot_L-digitata_M_contig102387.1.1|Name=mRNA_L-digitata_M_contig102387.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=83bp
LQIAYSVSRECLGRFRPDCAMFFERAAEVHMHVPEGATPKDGPSAGVTMV
TALLSLAMRTPVREDLAMTGELSLTGKVCWGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR008269Lon_proteolytic
IPR027065Lon_Prtase
IPR008268Peptidase_S16_AS
IPR020568Ribosomal_S5_D2-typ_fold