prot_L-digitata_M_contig102330.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig102330.1.1
Unique Nameprot_L-digitata_M_contig102330.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length226
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102330.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 78..111
e-value: 6.8E-9
score: 36.1
coord: 2..35
e-value: 3.8E-10
score: 40.1
coord: 40..73
e-value: 1.2E-8
score: 35.4
coord: 116..150
e-value: 2.7E-8
score: 34.2
coord: 192..226
e-value: 3.5E-8
score: 33.9
coord: 154..184
e-value: 2.7E-5
score: 24.6
NoneNo IPR availableGENE3D6.10.140.110coord: 59..123
e-value: 6.5E-11
score: 44.3
coord: 130..190
e-value: 9.8E-10
score: 40.6
coord: 16..58
e-value: 1.4E-5
score: 27.3
NoneNo IPR availablePIRSRPIRSR621116-50PIRSR621116-50coord: 174..204
e-value: 140.0
score: 0.3
coord: 61..87
e-value: 0.18
score: 9.7
coord: 25..46
e-value: 29.0
score: 2.6
coord: 138..160
e-value: 2.1
score: 6.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig102330contigL-digitata_M_contig102330:4..681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig102330.1.1mRNA_L-digitata_M_contig102330.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig102330 4..681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig102330.1.1 ID=prot_L-digitata_M_contig102330.1.1|Name=mRNA_L-digitata_M_contig102330.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=226bp
RCSHGSCTTWPTFNVKGEKKAAFCKRHADDGMVNVSDKRCSHGTCSRIPS
FNVKGSKTAAFCKQHSEEGMVDVHSKRCAHATCTTRASFNVDGIKTPVFC
GKHAEDGMVNVFFPSCGRSSCSKIPYFNVEGSKRAAYCKQHAEDGMVNVK
RKRCSHATCTKFPSFKVEGSKAATRCKQHAEDGMSGNSVKPCVHPTCRAR
PYFNFGDVKTAVYCRLHAEDGMVNVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys