prot_L-digitata_M_contig10197.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10197.1.1
Unique Nameprot_L-digitata_M_contig10197.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length336
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10197.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 118..152
e-value: 1.5E-8
score: 35.0
coord: 4..38
e-value: 2.3E-8
score: 34.4
coord: 80..113
e-value: 3.6E-8
score: 33.8
coord: 156..190
e-value: 3.0E-6
score: 27.7
coord: 232..266
e-value: 1.5E-8
score: 35.0
coord: 194..228
e-value: 4.9E-8
score: 33.4
coord: 270..304
e-value: 5.6E-7
score: 30.0
coord: 42..76
e-value: 6.4E-10
score: 39.4
coord: 308..336
e-value: 0.001
score: 19.7
NoneNo IPR availableGENE3D6.10.140.110coord: 61..98
e-value: 1.3E-6
score: 30.6
coord: 20..60
e-value: 7.3E-7
score: 31.4
coord: 99..159
e-value: 2.5E-11
score: 45.6
coord: 289..336
e-value: 7.7E-6
score: 28.1
coord: 210..267
e-value: 1.1E-10
score: 43.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10197contigL-digitata_M_contig10197:3668..4675 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10197.1.1mRNA_L-digitata_M_contig10197.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10197 3668..4675 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10197.1.1 ID=prot_L-digitata_M_contig10197.1.1|Name=mRNA_L-digitata_M_contig10197.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=336bp
MCRCLHDCCTKRAYFNSEGSKAPAYCKQHAEAGMVDVVNRRCAHDICTKR
PSFNFEGSKTAVYCSRHAEGGMVDVRSRRCSHHRCTKRPSFNIKGSKTAA
YCKQHAVDGMVDVSSSRCSYDSCNKTPSFNFEGTKPAAYCRKHSADGMVD
VYSSRCAHDSCVTHPSFNFEDCNTPMYCRTHAAHGMVYVRNSRCSFDSCN
KKPSFDIEGSRTAMYCRQHAGDGMVDVRNKLCSHNYCARRPSFNTKGLKT
AAYCRTHAEDGMVDVYSGLCSHDSCKKRASYDVKGSKAPIYCLQHADHGM
VDVRHNRCSHSSCTKRPKFNFEGSNRAAYCRLHADD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys